Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G57960.1
CDS Infomation	\| GTP-binding protein%2C HflX \| Chr5:23463133-23466481 REVERSE LENGTH=1623 \| 201606
Sequence	ATGAGCTCGTTTTACCTTTCTTCTTCTCCAATTTTCAAACTTCAGTGGCACGCAAACCAT AAACCTAAACCCAATCGTGCAATAGTTTCTTTTCCACCTTCTCGTCTTCATGCCAACTGC TATTCGTGGAGATTATCTTGTAACCTTGCTCAACATGGTATTGAGTTGGAGGAAACTGTG GAGGAAGATGAAATCCTTCAAGTTCTCGACTTACCAACAGAGGAGACAAATCTCGACAAC GAAACGATTGCTTCTCCATCTAAAATGTTGAGGAAGAAAAAAGGAGATGAAGAGAGCTTG GACGATAGATTCAAGCTCAGAAATGGAAAGGAGATTTTCGAAGAGAAGGCATATCTAGTG GGCGTGGAAAGAAAGGGTGATGGAGAATGCTTGTTTAATATTGAGGAATCTCTTGAGGAG CTAGAACAACTTGCGGATACTGCTGGGCTTGCAGTGGTTGGTTCTACTTATCAAAAGCTA GCTTCCCCAAATCCTAGAACATACATTGGATCAGGAAAGGTCGCAGAGATAAAAAGTGCA ATTAATGCTTTGGACGTTGAGACTGTGATATTTGACGATGAACTTTCACCAGGGCAATTG CGTAACCTGGAAAAGGCCTTTGGTGGGGATGTTCGAGTTTGTGACCGCACCGCCCTTATC TTGGACATTTTCAACCAAAGGGCCGCAACTCATGAAGCAGCCTTGCAGGTTGCTCTAGCA CAAATGGAGTACCAGTTGCCACGATTAACTAGAATGTGGACTCATCTTGAGCGTCAATCT GGTGGCCAAGTTAAGGGTATGGGAGAAAAACAAATTGAAGTTGATAAGCGAATCTTGCGT ACTCAAATTGGAGTTCTCAAAAAGGAGTTGGAATCTGTAAGAAAGCATCGGAAGCAGTAT AGAAGCAGGCGTGTTGCTATACCTGTACCTGTTGTATCCTTGGTCGGTTACACAAACGCT GGAAAGAGTACACTATTGAACCAATTGACTGGTGCTAATGTTCTCGCTGAAAATCGTTTG TTTGCAACTCTTGATCCAACTACGAGAAGGGTTCAGATGCAAAACGGGAAGGAATTTCTT CTCACAGATACTGTTGGTTTTATCCAAAAGTTACCAACCACTCTGGTTGCTGCTTTCAGA GCAACACTTGAAGAAATAGCAGAGTCAAGCCTTTTGGTGCATGTTGTTGACATCAGCCAC CCACTGGCAGAGCAACAAATAGAAGCTGTGGAGAAGGTTATGTCTGAACTCGACGTTTCA TCAATTCCAAAATTGGTCGTGTGGAATAAGGTTGATAGAGTGGATGATCCTCAAAAGGTC AAGCTGGAAGCAGAGGAAACTGGGGATACAATTTGTATATCTGCTCTGACTGGAGAAGGA CTAGACGACTTCTGCAATGCTGTTCATGAGAAGCTCAAGGATTCAATGGTTTGGGTTGAA GCCCTTTTGCCATTTGATAAAGGGGACCTTCTAAGCACCATACACAAGGTTGGAATGGTG AAAGAAACTGAATATACAGAGAATGGGACACTTATCAGGGCACACGTTCCGCTACGTTTT GCACAGCTGCTTAAACCTATGAGACACTTGGTCAAAGATACTTCAATAAGCCAAAGAGGA TGA

Peptide Sequence

PEP ID	AT5G57960.1
PEP Infomation	\| GTP-binding protein%2C HflX \| Chr5:23463133-23466481 REVERSE LENGTH=540 \| 201606
Sequence	MSSFYLSSSPIFKLQWHANHKPKPNRAIVSFPPSRLHANCYSWRLSCNLAQHGIELEETV EEDEILQVLDLPTEETNLDNETIASPSKMLRKKKGDEESLDDRFKLRNGKEIFEEKAYLV GVERKGDGECLFNIEESLEELEQLADTAGLAVVGSTYQKLASPNPRTYIGSGKVAEIKSA INALDVETVIFDDELSPGQLRNLEKAFGGDVRVCDRTALILDIFNQRAATHEAALQVALA QMEYQLPRLTRMWTHLERQSGGQVKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQY RSRRVAIPVPVVSLVGYTNAGKSTLLNQLTGANVLAENRLFATLDPTTRRVQMQNGKEFL LTDTVGFIQKLPTTLVAAFRATLEEIAESSLLVHVVDISHPLAEQQIEAVEKVMSELDVS SIPKLVVWNKVDRVDDPQKVKLEAEETGDTICISALTGEGLDDFCNAVHEKLKDSMVWVE ALLPFDKGDLLSTIHKVGMVKETEYTENGTLIRAHVPLRFAQLLKPMRHLVKDTSISQRG

Transcript Sequence

Transcript ID	AT5G57960.1
Transcript Infomation	\| GTP-binding protein%2C HflX \| Chr5:23462704-23466678 REVERSE LENGTH=2249 \| 201606
Sequence	CAATAATGTTGTCCATGGACAAGATACAGCTAATCTAGTAACCAAACAAATTAACTCAAA AATAAAACAAAAAAACGGCAATCATTGTACATTAAAGGATTAAATTAAACGACACGTAGT TGAACTCACTGCTTCTTCACCATCCATGAACTCATTTCCACACACTCAATCTCTCAGAAG CTCCTTCATTCTCCACCATGAGCTCGTTTTACCTTTCTTCTTCTCCAATTTTCAAACTTC AGTGGCACGCAAACCATAAACCTAAACCCAATCGTGCAATAGTTTCTTTTCCACCTTCTC GTCTTCATGCCAACTGCTATTCGTGGAGATTATCTTGTAACCTTGCTCAACATGGTATTG AGTTGGAGGAAACTGTGGAGGAAGATGAAATCCTTCAAGTTCTCGACTTACCAACAGAGG AGACAAATCTCGACAACGAAACGATTGCTTCTCCATCTAAAATGTTGAGGAAGAAAAAAG GAGATGAAGAGAGCTTGGACGATAGATTCAAGCTCAGAAATGGAAAGGAGATTTTCGAAG AGAAGGCATATCTAGTGGGCGTGGAAAGAAAGGGTGATGGAGAATGCTTGTTTAATATTG AGGAATCTCTTGAGGAGCTAGAACAACTTGCGGATACTGCTGGGCTTGCAGTGGTTGGTT CTACTTATCAAAAGCTAGCTTCCCCAAATCCTAGAACATACATTGGATCAGGAAAGGTCG CAGAGATAAAAAGTGCAATTAATGCTTTGGACGTTGAGACTGTGATATTTGACGATGAAC TTTCACCAGGGCAATTGCGTAACCTGGAAAAGGCCTTTGGTGGGGATGTTCGAGTTTGTG ACCGCACCGCCCTTATCTTGGACATTTTCAACCAAAGGGCCGCAACTCATGAAGCAGCCT TGCAGGTTGCTCTAGCACAAATGGAGTACCAGTTGCCACGATTAACTAGAATGTGGACTC ATCTTGAGCGTCAATCTGGTGGCCAAGTTAAGGGTATGGGAGAAAAACAAATTGAAGTTG ATAAGCGAATCTTGCGTACTCAAATTGGAGTTCTCAAAAAGGAGTTGGAATCTGTAAGAA AGCATCGGAAGCAGTATAGAAGCAGGCGTGTTGCTATACCTGTACCTGTTGTATCCTTGG TCGGTTACACAAACGCTGGAAAGAGTACACTATTGAACCAATTGACTGGTGCTAATGTTC TCGCTGAAAATCGTTTGTTTGCAACTCTTGATCCAACTACGAGAAGGGTTCAGATGCAAA ACGGGAAGGAATTTCTTCTCACAGATACTGTTGGTTTTATCCAAAAGTTACCAACCACTC TGGTTGCTGCTTTCAGAGCAACACTTGAAGAAATAGCAGAGTCAAGCCTTTTGGTGCATG TTGTTGACATCAGCCACCCACTGGCAGAGCAACAAATAGAAGCTGTGGAGAAGGTTATGT CTGAACTCGACGTTTCATCAATTCCAAAATTGGTCGTGTGGAATAAGGTTGATAGAGTGG ATGATCCTCAAAAGGTCAAGCTGGAAGCAGAGGAAACTGGGGATACAATTTGTATATCTG CTCTGACTGGAGAAGGACTAGACGACTTCTGCAATGCTGTTCATGAGAAGCTCAAGGATT CAATGGTTTGGGTTGAAGCCCTTTTGCCATTTGATAAAGGGGACCTTCTAAGCACCATAC ACAAGGTTGGAATGGTGAAAGAAACTGAATATACAGAGAATGGGACACTTATCAGGGCAC ACGTTCCGCTACGTTTTGCACAGCTGCTTAAACCTATGAGACACTTGGTCAAAGATACTT CAATAAGCCAAAGAGGATGAACCAGAATCATAGCAAGAACCTGAAGGCCTGCCTCTTGGT CAGAATCGGAGGCTACGTGTGCTTTGCCAAAGCATCCGAAAGCAAAAGGAATTCAAACAA CCTTCTGATCATACACACCACAAAGAATGACAGTCAGACAGTAAAGAATATTCGTAGATA AAAAGGAATGCAGCTAGACACAAGCAAGATAAGCTTGAACCTACTTCACATCGTGAACTG ACACTGGAAATGTTATTTCAACAGTGATAAGTGATAACCCTTTTTGTACATAGAGCATCC AATTTGGAAACATTGGGTACTATAACTAATAACAACACTTCAATGACCCAAAAACACTCT AATCTCAAACTCAAGAGTTTCTCAAAGCAGAGAGGAAAAATAAACGGACATGTATTAGAT AGCAAAACACTCCGCCAAAGCTGAGTTTT