Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

Gene sequence data has not been registered.

Peptide Sequence

PEP ID

AT5G57940.3
PEP Infomation

| cyclic nucleotide gated channel 5 | Chr5:23457116-23460439 FORWARD LENGTH=710 | 201606
Sequence

MAGKRENFVRLPSSSVAFQQNYASNFSGQLHPIHASNETSRSFKKGIQKGSKGLKSIGRS
LGFGVYRAVFPEDLKVSEKKIFDPQDKFLLYCNKLFVASCILSVFVDPFFFYLPVINAES
KCLGIDRKLAITASTLRTFIDVFYLAHMALQLRTAYIAPSSRVFGRGELVIDPAQIAKRY
LQRWFIIDFLSVLPLPQIVVWRFLQSSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTSE
LKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLALERNDACWQEACIDAGNCSTDF
LYCGNQNMDGYAVWNRAKESVLKSKCRADLDDNNPPFDFGIYTQALSSGIVSSQNFIVKY
CYCLWWGLQNLSTLGQGLETSTYPMEIIFSISLAISGLILFALLIGNMQTYLQSLTIRLE
EMRVKRRDSEQWMHHRMLPQDLRERVRRYDQYKWLETRGVDEEYLVQNLPKDLRRDIKRH
LCLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVT
TDGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEEL
KFVASQFRRLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRYCKRKKMEEAEAEAAAVSSS
TAGPSYSIGAAFLATKFAANALRTIHRNRNTKIRDLVKLQKPPEPDFTAD

Transcript Sequence

Transcript ID

AT5G57940.3
Transcript Infomation

| cyclic nucleotide gated channel 5 | Chr5:23457116-23460613 FORWARD LENGTH=2307 | 201606
Sequence

ATGGCAGGGAAAAGAGAAAACTTTGTGAGGTTACCATCATCATCTGTAGCCTTCCAACAG
AACTACGCCTCCAATTTCAGTGGACAACTTCATCCTATTCATGCAAGCAATGAAACTTCT
AGATCCTTCAAGAAAGGTATCCAGAAGGGTTCCAAAGGGCTTAAGTCGATCGGACGTTCA
CTTGGTTTCGGTGTTTATCGAGCAGTGTTCCCAGAAGACCTTAAAGTATCTGAAAAGAAG
ATATTTGATCCTCAGGATAAATTCCTTTTGTATTGCAATAAATTATTCGTTGCGTCATGT
ATTCTTTCAGTGTTTGTGGACCCTTTTTTCTTCTATCTTCCTGTGATTAATGCTGAGTCC
AAGTGCCTGGGTATTGACAGAAAACTGGCTATCACAGCAAGTACATTGCGGACTTTTATC
GATGTGTTTTATCTCGCTCACATGGCTCTCCAGCTTAGGACTGCTTATATTGCACCTTCA
TCACGGGTCTTTGGGCGAGGTGAACTCGTGATTGATCCTGCACAGATAGCAAAGAGATAT
CTACAACGTTGGTTTATTATTGACTTTCTCTCAGTACTTCCTCTCCCTCAGATTGTAGTT
TGGAGGTTCTTGCAAAGTTCAAATGGGTCGGATGTATTGGCTACAAAGCAGGCCTTGCTT
TTCATTGTTTTGGTCCAGTATATACCGCGATTCCTACGTGTCTTACCCTTGACGTCAGAA
TTGAAAAGGACAGCAGGTGTCTTTGCTGAAACGGCTTGGGCTGGTGCCGCTTATTATCTG
CTTTTATATATGCTTGCAAGTCATATAGTTGGAGCTTTTTGGTACCTTTTAGCCTTAGAA
CGTAACGACGCCTGCTGGCAGGAGGCCTGTATAGATGCAGGGAATTGCAGCACAGATTTC
TTGTACTGTGGCAATCAAAACATGGACGGCTATGCTGTTTGGAACAGAGCCAAGGAATCT
GTTCTTAAGTCCAAGTGCCGAGCTGACCTCGATGATAATAATCCTCCATTTGACTTTGGG
ATTTATACACAGGCTTTATCGTCTGGAATTGTCTCGTCCCAAAACTTCATCGTAAAATAT
TGTTATTGTTTGTGGTGGGGCCTTCAGAACTTGAGTACACTTGGACAAGGGCTTGAAACC
AGTACATACCCAATGGAGATTATATTTTCCATATCTCTCGCCATTTCTGGGTTGATCCTC
TTTGCTCTTCTCATTGGAAACATGCAGACATATCTCCAATCTCTTACCATCCGGCTTGAA
GAAATGAGAGTAAAGAGGCGTGATTCAGAACAATGGATGCATCACAGAATGTTACCACAA
GATCTTAGGGAGCGTGTGAGGCGCTATGACCAGTATAAATGGTTGGAGACACGTGGTGTA
GATGAAGAGTATCTCGTTCAGAATCTTCCCAAGGATCTCCGGAGAGACATCAAGCGGCAT
CTCTGTCTGGCTTTAGTGCGAAGGGTTCCATTGTTTAAGAGCATGGACGACAAGCTGCTG
GATGCGATCTGTATGCGGCTGAAACCATGCTTGTTCACAGAGAGTACCTACTTAGTGCGG
GAAGGAGATCCTGTAGACGAGATGCTATTCATAATACGTGGTCGCCTCGAGAGTGTGACA
ACAGATGGAGGCAGGAGCGGTTTCTTCAACCGCAGTCTCCTGAAAGAAGGAGAATTCTGC
GGGGAAGAGCTTCTGACATGGGCATTGGATCCAAAATCAGGTGTAAATCTCCCGTCTTCC
ACGAGGACCGTGAAAGCTCTGACAGAAGTAGAGGCGTTTGCGCTGACCTCAGAGGAGCTG
AAGTTTGTAGCAAGCCAGTTCCGGCGCTTACATAGCAGGCAAGTGCAGCACACATTCAGG
TTTTACTCTCACCAATGGAGGACTTGGGCTGCTTGTTTCATCCAGGCTGCCTGGCGTAGA
TACTGCAAGAGGAAGAAAATGGAAGAGGCAGAAGCCGAGGCCGCGGCTGTGTCCAGCTCA
ACCGCTGGACCTTCATACTCCATTGGGGCTGCATTTCTTGCCACTAAGTTTGCGGCTAAT
GCGCTTCGCACCATTCACAGGAACCGGAACACAAAGATTAGGGATTTGGTGAAGCTGCAG
AAGCCTCCTGAGCCTGATTTCACTGCTGACTGATGATTGAGCAGCTTGTAGACATTATTG
TTTATAATTTATGGGAATCATTACGGTTGAGATAAACAAATATTGCTTGGCTTTAAAGCT
GCTTGTGCTGTCTGTAAAATTAATATATGAAGTGTAGAAACAAAGAGATTATAGCCGTTG
GATTTAATAAATGTACGGTTAGGATCA