Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G57160.1
CDS Infomation	\| DNA ligase IV \| Chr5:23155150-23161688 REVERSE LENGTH=3660 \| 201606
Sequence	ATGACGGAGGAGATCAAATTCAGCGTACTGGTATCTCTCTTTAACTGGATTCAAAAAAGC AAAACCTCATCTCAGAAACGATCCAAATTCCGCAAGTTTCTCGACACTTACTGCAAACCC TCCGACTACTTCGTCGCCGTCCGTTTAATCATTCCGTCGCTTGATCGAGAACGAGGTAGC TACGGCCTTAAAGAGTCAGTGCTCGCCACGTGTCTGATCGACGCACTTGGTATCTCGCGT GATGCTCCTGATGCTGTTCGTCTTCTCAATTGGCGTAAAGGAGGAACTGCTAAAGCTGGA GCCAATGCTGGAAACTTCTCCTTAATTGCTGCTGAGGTATTGCAACGTAGACAAGGAATG GCTTCTGGCGGTTTGACTATTAAGGAATTGAATGATTTGCTTGATCGTTTGGCTTCAAGT GAGAACAGAGCGGAGAAAACTTTGGTTCTTTCTACATTGATTCAGAAGACAAATGCTCAG GAGATGAAGTGGGTCATTAGGATTATTCTAAAAGATTTGAAACTGGGAATGAGTGAGAAG AGCATTTTTCAGGAGTTCCATCCAGATGCTGAGGACTTGTTTAATGTCACATGTGATTTG AAACTAGTCTGTGAAAAGTTGAGGGATCGACACCAACGGCACAAGCGCCAGGATATAGAG GTTGGAAAAGCCGTACGACCCCAGTTAGCTATGCGTATTGGTGACGTAAATGCTGCTTGG AAGAAGCTGCATGGGAAAGATGTAGTTGCTGAATGCAAATTTGATGGGGATCGCATACAA ATACACAAAAATGGGACTGACATACATTACTTCTCTAGGAACTTCCTTGACCATTCTGAA TACGCACATGCCATGTCGGATCTTATTGTACAAAATATATTGGTGGACAAGTGTATCCTT GATGGTGAAATGTTGGTCTGGGATACATCTCTGAATCGGTTTGCTGAGTTTGGTTCGAAT CAGGAAATAGCCAAGGCAGCAAGGGAGGGTCTTGACAGCCATAAACAGTTGTGTTATGTT GCCTTTGATGTTCTTTATGTTGGCGATACTAGCGTCATCCACCAGAGTTTGAAGGAACGG CATGAACTGCTGAAGAAAGTGGTCAAACCTTTAAAAGGTCGGCTCGAAGTTTTAGTACCT GAAGGTGGTCTCAATGTTCACCGCCCTTCAGGGGAACCTAGTTGGTCTATTGTTGTTCAT GCTGCTGCTGATGTTGAGCGATTTTTCAAAGAAACAGTTGAAAACAGAGATGAAGGAATT GTGCTTAAAGACCTGGAATCAAAATGGGAACCTGGAGATCGTAGTGGCAAGTGGATGAAA TTGAAGCCTGAATATATCCGGGCTGGTGCTGACCTGGATGTTCTTATAATAGGAGGATAC TATGGCTCCGGACGTCGTGGAGGAGAGGTAGCACAGTTTCTTGTAGCCTTGGCTGACCGG GCAGAGGCAAATGTATATCCCAGGCGATTTATGTCCTTTTGTAGAGTTGGCACTGGGCTT TCTGATGATGAGCTTAACACTGTTGTAAGCAAACTGAAGCCTTATTTCAGAAAAAATGAG CACCCAAAGAAGGCTCCACCAAGCTTCTATCAGGTCACTAATCACTCCAAAGAGAGACCG GATGTTTGGATTGACAGCCCGGAAAAATCAATAATACTTTCAATCACTAGTGATATCAGG ACGATAAGGTCTGAGGTGTTTGTTGCACCTTACAGTCTGAGGTTTCCTCGTATTGATAAA GTAAGATATGACAAGCCTTGGCATGAATGTCTTGATGTGCAGGCTTTTGTGGAATTGGTG AATTCGAGTAACGGCACCACACAGAAACAGAAGGAGTCTGAAAGCACACAGGACAATCCG AAAGTCAATAAATCCTCCAAGAGAGGAGAGAAAAAGAATGTCTCTCTTGTTCCCTCTCAG TTTATTCAAACTGATGTATCGGATATCAAGGGCAAGACCTCAATCTTCTCAAATATGATA TTTTATTTTGTTAACGTGCCTCGGTCCCATTCTCTTGAGACATTCCACAAAATGGTGGTT GAAAACGGAGGGAAGTTTTCAATGAACTTAAACAACTCAGTGACTCATTGCATTGCAGCA GAAAGCAGTGGAATAAAGTATCAGGCAGCAAAGCGTCAGCGAGATGTCATCCACTTTTCA TGGGTCTTAGATTGTTGTTCACGAAATAAGATGCTTCCTTTGCTGCCAAAGTACTTCCTC CACCTCACTGATGCTTCAAGGACAAAATTACAGGATGATATTGATGAATTTTCTGATTCT TATTACTGGGATTTAGACCTTGAAGGTCTCAAACAGGTCTTAAGCAATGCCAAGCAATCT GAAGATTCAAAATCTATTGACTACTACAAGAAAAAGTTATGTCCTGAAAAAAGATGGTCC TGCCTCTTAAGCTGCTGTGTTTACTTTTACCCGTATAGTCAAACATTGAGCACTGAAGAG GAAGCCCTATTGGGAATTATGGCTAAGAGATTAATGCTTGAAGTCTTAATGGCTGGTGGT AAAGTTAGCAATAATCTTGCTCATGCGTCGCACCTTGTAGTTCTTGCTATGGCAGAAGAA CCTTTGGATTTTACTTTAGTTTCGAAAAGTTTCAGCGAAATGGAGAAACGTCTTTTGCTG AAGAAAAGGCTTCATGTTGTTAGCTCGCACTGGTTAGAGGAAAGCTTGCAAAGAGAGGAA AAACTGTGCGAGGATGTCTACACTCTGAGGCCTAAGTATATGGAAGAGTCTGATACTGAA GAATCAGATAAATCCGAACATGATACAACGGAAGTAGCTTCCCAAGGTAGTGCTCAAACC AAAGAGCCAGCTTCCTCTAAAATTGCAATTACGAGTTCAAGAGGACGGTCAAATACTCGA GCTGTTAAAAGGGGAAGGTCTTCTACAAACTCACTGCAACGAGTACAGAGACGCAGAGGC AAGCAGCCGTCTAAGATAAGCGGAGATGAAACAGAGGAAAGTGATGCTTCTGAAGAAAAG GTTTCAACAAGACTCAGTGATATAGCAGAAGAGACGGATTCGTTTGGTGAGGCTCAAAGA AACTCTAGCAGAGGAAAATGTGCGAAGAGAGGAAAGTCTCGTGTGGGACAAACCCAAAGA GTACAGAGATCACGCAGAGGCAAGAAAGCTGCGAAGATAGGAGGAGATGAGTCTGATGAA AATGATGAATTAGATGGCAATAACAATGTGTCAGCAGATGCGGAAGAGGGTAATGCAGCT GGTAGATCTGTGGAAAACGAAGAAACCCGAGAGCCTGACATAGCGAAGTACACAGAATCA CAGCAAAGAGACAACACAGTAGCAGTTGAAGAGGCCTTACAAGATTCTAGAAATGCAAAG ACGGAGATGGATATGAAAGAGAAGTTACAAATCCATGAGGATCCACTACAAGCTATGTTA ATGAAAATGTTCCCTATTCCCAGTCAAAAAACCACAGAGACATCAAACCGAACCACTGGG GAATATAGAAAGGCTAATGTTTCTGGTGAATGTGAGTCTTCAGAGAAAAGAAAACTCGAC GCTGAGACTGATAATACATCTGTGAACGCAGGCGCAGAATCAGACGTAGTTCCTCCTCTA GTGAAGAAAAAGAAAGTCAGCTACCGGGATGTTGCCGGAGAACTGCTCAAAGACTGGTGA

Peptide Sequence

PEP ID	AT5G57160.1
PEP Infomation	\| DNA ligase IV \| Chr5:23155150-23161688 REVERSE LENGTH=1219 \| 201606
Sequence	MTEEIKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLIIPSLDRERGS YGLKESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGM ASGGLTIKELNDLLDRLASSENRAEKTLVLSTLIQKTNAQEMKWVIRIILKDLKLGMSEK SIFQEFHPDAEDLFNVTCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRIGDVNAAW KKLHGKDVVAECKFDGDRIQIHKNGTDIHYFSRNFLDHSEYAHAMSDLIVQNILVDKCIL DGEMLVWDTSLNRFAEFGSNQEIAKAAREGLDSHKQLCYVAFDVLYVGDTSVIHQSLKER HELLKKVVKPLKGRLEVLVPEGGLNVHRPSGEPSWSIVVHAAADVERFFKETVENRDEGI VLKDLESKWEPGDRSGKWMKLKPEYIRAGADLDVLIIGGYYGSGRRGGEVAQFLVALADR AEANVYPRRFMSFCRVGTGLSDDELNTVVSKLKPYFRKNEHPKKAPPSFYQVTNHSKERP DVWIDSPEKSIILSITSDIRTIRSEVFVAPYSLRFPRIDKVRYDKPWHECLDVQAFVELV NSSNGTTQKQKESESTQDNPKVNKSSKRGEKKNVSLVPSQFIQTDVSDIKGKTSIFSNMI FYFVNVPRSHSLETFHKMVVENGGKFSMNLNNSVTHCIAAESSGIKYQAAKRQRDVIHFS WVLDCCSRNKMLPLLPKYFLHLTDASRTKLQDDIDEFSDSYYWDLDLEGLKQVLSNAKQS EDSKSIDYYKKKLCPEKRWSCLLSCCVYFYPYSQTLSTEEEALLGIMAKRLMLEVLMAGG KVSNNLAHASHLVVLAMAEEPLDFTLVSKSFSEMEKRLLLKKRLHVVSSHWLEESLQREE KLCEDVYTLRPKYMEESDTEESDKSEHDTTEVASQGSAQTKEPASSKIAITSSRGRSNTR AVKRGRSSTNSLQRVQRRRGKQPSKISGDETEESDASEEKVSTRLSDIAEETDSFGEAQR NSSRGKCAKRGKSRVGQTQRVQRSRRGKKAAKIGGDESDENDELDGNNNVSADAEEGNAA GRSVENEETREPDIAKYTESQQRDNTVAVEEALQDSRNAKTEMDMKEKLQIHEDPLQAML MKMFPIPSQKTTETSNRTTGEYRKANVSGECESSEKRKLDAETDNTSVNAGAESDVVPPL VKKKKVSYRDVAGELLKDW

Transcript Sequence

Transcript ID	AT5G57160.1
Transcript Infomation	\| DNA ligase IV \| Chr5:23154965-23161826 REVERSE LENGTH=3983 \| 201606
Sequence	CCAAAACCGGCCGTGCAACTTTTCAAACGCGACTTCCTTCTCCGGCAAGCAATTCACGCC GCTGCTCAGTGATTCTCCGTCACTATTTCCCTGATTAACCATCTTCTCCGGAAGAATCTA TAATTCCGGCAAAGTAAGATGACGGAGGAGATCAAATTCAGCGTACTGGTATCTCTCTTT AACTGGATTCAAAAAAGCAAAACCTCATCTCAGAAACGATCCAAATTCCGCAAGTTTCTC GACACTTACTGCAAACCCTCCGACTACTTCGTCGCCGTCCGTTTAATCATTCCGTCGCTT GATCGAGAACGAGGTAGCTACGGCCTTAAAGAGTCAGTGCTCGCCACGTGTCTGATCGAC GCACTTGGTATCTCGCGTGATGCTCCTGATGCTGTTCGTCTTCTCAATTGGCGTAAAGGA GGAACTGCTAAAGCTGGAGCCAATGCTGGAAACTTCTCCTTAATTGCTGCTGAGGTATTG CAACGTAGACAAGGAATGGCTTCTGGCGGTTTGACTATTAAGGAATTGAATGATTTGCTT GATCGTTTGGCTTCAAGTGAGAACAGAGCGGAGAAAACTTTGGTTCTTTCTACATTGATT CAGAAGACAAATGCTCAGGAGATGAAGTGGGTCATTAGGATTATTCTAAAAGATTTGAAA CTGGGAATGAGTGAGAAGAGCATTTTTCAGGAGTTCCATCCAGATGCTGAGGACTTGTTT AATGTCACATGTGATTTGAAACTAGTCTGTGAAAAGTTGAGGGATCGACACCAACGGCAC AAGCGCCAGGATATAGAGGTTGGAAAAGCCGTACGACCCCAGTTAGCTATGCGTATTGGT GACGTAAATGCTGCTTGGAAGAAGCTGCATGGGAAAGATGTAGTTGCTGAATGCAAATTT GATGGGGATCGCATACAAATACACAAAAATGGGACTGACATACATTACTTCTCTAGGAAC TTCCTTGACCATTCTGAATACGCACATGCCATGTCGGATCTTATTGTACAAAATATATTG GTGGACAAGTGTATCCTTGATGGTGAAATGTTGGTCTGGGATACATCTCTGAATCGGTTT GCTGAGTTTGGTTCGAATCAGGAAATAGCCAAGGCAGCAAGGGAGGGTCTTGACAGCCAT AAACAGTTGTGTTATGTTGCCTTTGATGTTCTTTATGTTGGCGATACTAGCGTCATCCAC CAGAGTTTGAAGGAACGGCATGAACTGCTGAAGAAAGTGGTCAAACCTTTAAAAGGTCGG CTCGAAGTTTTAGTACCTGAAGGTGGTCTCAATGTTCACCGCCCTTCAGGGGAACCTAGT TGGTCTATTGTTGTTCATGCTGCTGCTGATGTTGAGCGATTTTTCAAAGAAACAGTTGAA AACAGAGATGAAGGAATTGTGCTTAAAGACCTGGAATCAAAATGGGAACCTGGAGATCGT AGTGGCAAGTGGATGAAATTGAAGCCTGAATATATCCGGGCTGGTGCTGACCTGGATGTT CTTATAATAGGAGGATACTATGGCTCCGGACGTCGTGGAGGAGAGGTAGCACAGTTTCTT GTAGCCTTGGCTGACCGGGCAGAGGCAAATGTATATCCCAGGCGATTTATGTCCTTTTGT AGAGTTGGCACTGGGCTTTCTGATGATGAGCTTAACACTGTTGTAAGCAAACTGAAGCCT TATTTCAGAAAAAATGAGCACCCAAAGAAGGCTCCACCAAGCTTCTATCAGGTCACTAAT CACTCCAAAGAGAGACCGGATGTTTGGATTGACAGCCCGGAAAAATCAATAATACTTTCA ATCACTAGTGATATCAGGACGATAAGGTCTGAGGTGTTTGTTGCACCTTACAGTCTGAGG TTTCCTCGTATTGATAAAGTAAGATATGACAAGCCTTGGCATGAATGTCTTGATGTGCAG GCTTTTGTGGAATTGGTGAATTCGAGTAACGGCACCACACAGAAACAGAAGGAGTCTGAA AGCACACAGGACAATCCGAAAGTCAATAAATCCTCCAAGAGAGGAGAGAAAAAGAATGTC TCTCTTGTTCCCTCTCAGTTTATTCAAACTGATGTATCGGATATCAAGGGCAAGACCTCA ATCTTCTCAAATATGATATTTTATTTTGTTAACGTGCCTCGGTCCCATTCTCTTGAGACA TTCCACAAAATGGTGGTTGAAAACGGAGGGAAGTTTTCAATGAACTTAAACAACTCAGTG ACTCATTGCATTGCAGCAGAAAGCAGTGGAATAAAGTATCAGGCAGCAAAGCGTCAGCGA GATGTCATCCACTTTTCATGGGTCTTAGATTGTTGTTCACGAAATAAGATGCTTCCTTTG CTGCCAAAGTACTTCCTCCACCTCACTGATGCTTCAAGGACAAAATTACAGGATGATATT GATGAATTTTCTGATTCTTATTACTGGGATTTAGACCTTGAAGGTCTCAAACAGGTCTTA AGCAATGCCAAGCAATCTGAAGATTCAAAATCTATTGACTACTACAAGAAAAAGTTATGT CCTGAAAAAAGATGGTCCTGCCTCTTAAGCTGCTGTGTTTACTTTTACCCGTATAGTCAA ACATTGAGCACTGAAGAGGAAGCCCTATTGGGAATTATGGCTAAGAGATTAATGCTTGAA GTCTTAATGGCTGGTGGTAAAGTTAGCAATAATCTTGCTCATGCGTCGCACCTTGTAGTT CTTGCTATGGCAGAAGAACCTTTGGATTTTACTTTAGTTTCGAAAAGTTTCAGCGAAATG GAGAAACGTCTTTTGCTGAAGAAAAGGCTTCATGTTGTTAGCTCGCACTGGTTAGAGGAA AGCTTGCAAAGAGAGGAAAAACTGTGCGAGGATGTCTACACTCTGAGGCCTAAGTATATG GAAGAGTCTGATACTGAAGAATCAGATAAATCCGAACATGATACAACGGAAGTAGCTTCC CAAGGTAGTGCTCAAACCAAAGAGCCAGCTTCCTCTAAAATTGCAATTACGAGTTCAAGA GGACGGTCAAATACTCGAGCTGTTAAAAGGGGAAGGTCTTCTACAAACTCACTGCAACGA GTACAGAGACGCAGAGGCAAGCAGCCGTCTAAGATAAGCGGAGATGAAACAGAGGAAAGT GATGCTTCTGAAGAAAAGGTTTCAACAAGACTCAGTGATATAGCAGAAGAGACGGATTCG TTTGGTGAGGCTCAAAGAAACTCTAGCAGAGGAAAATGTGCGAAGAGAGGAAAGTCTCGT GTGGGACAAACCCAAAGAGTACAGAGATCACGCAGAGGCAAGAAAGCTGCGAAGATAGGA GGAGATGAGTCTGATGAAAATGATGAATTAGATGGCAATAACAATGTGTCAGCAGATGCG GAAGAGGGTAATGCAGCTGGTAGATCTGTGGAAAACGAAGAAACCCGAGAGCCTGACATA GCGAAGTACACAGAATCACAGCAAAGAGACAACACAGTAGCAGTTGAAGAGGCCTTACAA GATTCTAGAAATGCAAAGACGGAGATGGATATGAAAGAGAAGTTACAAATCCATGAGGAT CCACTACAAGCTATGTTAATGAAAATGTTCCCTATTCCCAGTCAAAAAACCACAGAGACA TCAAACCGAACCACTGGGGAATATAGAAAGGCTAATGTTTCTGGTGAATGTGAGTCTTCA GAGAAAAGAAAACTCGACGCTGAGACTGATAATACATCTGTGAACGCAGGCGCAGAATCA GACGTAGTTCCTCCTCTAGTGAAGAAAAAGAAAGTCAGCTACCGGGATGTTGCCGGAGAA CTGCTCAAAGACTGGTGATACTCTACCATTTCGAACCATGTAACAAAGCTCTTATGTTAT GTACATGTTTTGTAACTCTTAAATCCTTTTTTATCTCTTTTGGTGTGGCCATAATTTATT TATTTTACTGGTAAACAAGGCGTACATTTATTGTAGACAGTAGAGAAAAGGTGAAAGAAG AAAGGCTTCGTGATGGACAAACA