Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G57070.1
CDS Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr5:23096221-23097948 FORWARD LENGTH=1728 \| 201606
Sequence	ATGGACGATCAACCGCCGCTGATCTGGCCCCAGTTTGACTCTACCGGATATGCTCGCCGG AGATCATCGATTCCGGCGATTTTAGTTCCGGCGATGATCGGAGTAACTTCAGCGGCGATT TTTCTTGTCTTTGTGACCTTCGTCGTTCCTACGTTTCTCTCAGTCACATCTCAGATTCTT CAGCCAGCTTCGGTGAAGCGAGGATGGGATTCGATAAACGTGGTTTTAGTGGTTTTCGCG ATTCTCTGCGGCGTACTCGCTAGACGAAACGACGACGGATTGTCTTCGGAGTCTTTACAC GGCGGAGAAGAAGAAGAAGTAGGAGGAGGAGCCGTTACGAATGGTGAAATGACCGTCGGT GAGATTAGCAAAATCTCATCCTCGTCGTCGACGGTTTCAGAGCAGTGGTTTGATGACGTG TATGATTCTGATAGGCTTAAGATCTATGAGAGTGTAAGTAGTCGAAGTTTTTCTCATGGA TTACCGGTTACCGGGAATGTACCGTTGAGGCGTAGTAGTAGCTCTTATCCTGATCTCAGA CAAGGAGTTTTTAGAGAAACTGGCGATCGACGGTTCCGGTTTTATGATGATTTCGAAATC GATAAGTACCGATCGCAGGATTCGAGTTCTTACCAACAATTTCAGAATCTTTCTAAAACT GAAATCGAGGAAGAAGAATCTGAGCCTAAAGAGATTCAGATTGATACGTTCGTTGTAAAA CCGTCTTCTCCGCCGCAACAACCACCGGCAACACCACCACCTCCTCCCCCACCTCCGCCG GTTGAAGTTCCGCAGAAACCGAGAAGGACTCATCGTTCTGTTAGAAACAGAGATTTACAA GAAAACGCCAAACGCAGTGAGACTAAGTTTAAACGAACGTTTCAGCCTCCGCCGTCACCA CCGCCTCCACCGCCCCCACCACCTCCTCAGCCGCTTATAGCCGCTACGCCACCAAGAAAA CAAGGAACTCTTCAAAGAAGAAAGAGCAATGCGGCGAAAGAGATTAAAATGGTTTTCGCT TCTCTGTATAATCAAGGGAAGAAGAAGAAGAAGCTTCAGAAATCGAAGAGAAAAGAGAGA ATCGAATCTTCTCCGATGGTGGAAGATGTAACGGAACCACCGCAATACCAATCGTTAATC CCACCACCGTCTCCGCCTCCTCCTCCACCACCACCTCCGCCTCCATTGCGATCGTCACAA TCAGTATTCTACGGATTGTTCAAGAAAGGAGTTAAGAGCAACAAAAAGATTCATTCCGTT CCGGCGCCGCCTCCACCTCCACCGCCGAGATATACCCAATTTGATCCTCAGACACCACCA CGGAGAGTGAAATCCGGAAGACCTCCGCGTCCGACGAAACCGAAGAATTTCAATGAAGAG AACAACGGCCAAGGATCTCCGTTAATCCAAATTACGCCTCCACCTCCACCACCGCCTCCG TTTAGAGTTCCGCCGCTAAAATATGTCGTGAGTGGTGATTTCGCGAAGATACGGAGTAAT CAGAGCTCTAGATGTAGCTCCCCTGAACGGGAAGTGTTCGATATCGGTTGGGGTCTAGAA CTCACACAATCTGATGGCGGAGTTGAGACTAAAGCTGCCGTCAGCGGCGGCGGTATGCCG GGATTCTGCCCAAGCCCGGACGTTGATACGAAAGCCGACAATTTCATTGCCAGGCTTAGA GATGAGTGGAGGCTCGATAAGATCAATTCCGTGAATAGAAAGAGGTAA

Peptide Sequence

PEP ID	AT5G57070.1
PEP Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr5:23096221-23097948 FORWARD LENGTH=575 \| 201606
Sequence	MDDQPPLIWPQFDSTGYARRRSSIPAILVPAMIGVTSAAIFLVFVTFVVPTFLSVTSQIL QPASVKRGWDSINVVLVVFAILCGVLARRNDDGLSSESLHGGEEEEVGGGAVTNGEMTVG EISKISSSSSTVSEQWFDDVYDSDRLKIYESVSSRSFSHGLPVTGNVPLRRSSSSYPDLR QGVFRETGDRRFRFYDDFEIDKYRSQDSSSYQQFQNLSKTEIEEEESEPKEIQIDTFVVK PSSPPQQPPATPPPPPPPPPVEVPQKPRRTHRSVRNRDLQENAKRSETKFKRTFQPPPSP PPPPPPPPPQPLIAATPPRKQGTLQRRKSNAAKEIKMVFASLYNQGKKKKKLQKSKRKER IESSPMVEDVTEPPQYQSLIPPPSPPPPPPPPPPPLRSSQSVFYGLFKKGVKSNKKIHSV PAPPPPPPPRYTQFDPQTPPRRVKSGRPPRPTKPKNFNEENNGQGSPLIQITPPPPPPPP FRVPPLKYVVSGDFAKIRSNQSSRCSSPEREVFDIGWGLELTQSDGGVETKAAVSGGGMP GFCPSPDVDTKADNFIARLRDEWRLDKINSVNRKR

Transcript Sequence

Transcript ID	AT5G57070.1
Transcript Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr5:23096024-23098602 FORWARD LENGTH=2579 \| 201606
Sequence	GTCCGTATGATTATAAATCTTAATCATATCATTTCCCCCTATAATAACGTACTTAAAATT ATTAATACTACTATTATTGTTAATCTCTCCGCCACATAATAAGACCACTATATAAACGTT TACTCCATTAATGTACTGTAATCGAATCGACAAGTCTCTCTCTTCTCTCTCTCTATTCAA AAATTATACCGGCAAAAATGGACGATCAACCGCCGCTGATCTGGCCCCAGTTTGACTCTA CCGGATATGCTCGCCGGAGATCATCGATTCCGGCGATTTTAGTTCCGGCGATGATCGGAG TAACTTCAGCGGCGATTTTTCTTGTCTTTGTGACCTTCGTCGTTCCTACGTTTCTCTCAG TCACATCTCAGATTCTTCAGCCAGCTTCGGTGAAGCGAGGATGGGATTCGATAAACGTGG TTTTAGTGGTTTTCGCGATTCTCTGCGGCGTACTCGCTAGACGAAACGACGACGGATTGT CTTCGGAGTCTTTACACGGCGGAGAAGAAGAAGAAGTAGGAGGAGGAGCCGTTACGAATG GTGAAATGACCGTCGGTGAGATTAGCAAAATCTCATCCTCGTCGTCGACGGTTTCAGAGC AGTGGTTTGATGACGTGTATGATTCTGATAGGCTTAAGATCTATGAGAGTGTAAGTAGTC GAAGTTTTTCTCATGGATTACCGGTTACCGGGAATGTACCGTTGAGGCGTAGTAGTAGCT CTTATCCTGATCTCAGACAAGGAGTTTTTAGAGAAACTGGCGATCGACGGTTCCGGTTTT ATGATGATTTCGAAATCGATAAGTACCGATCGCAGGATTCGAGTTCTTACCAACAATTTC AGAATCTTTCTAAAACTGAAATCGAGGAAGAAGAATCTGAGCCTAAAGAGATTCAGATTG ATACGTTCGTTGTAAAACCGTCTTCTCCGCCGCAACAACCACCGGCAACACCACCACCTC CTCCCCCACCTCCGCCGGTTGAAGTTCCGCAGAAACCGAGAAGGACTCATCGTTCTGTTA GAAACAGAGATTTACAAGAAAACGCCAAACGCAGTGAGACTAAGTTTAAACGAACGTTTC AGCCTCCGCCGTCACCACCGCCTCCACCGCCCCCACCACCTCCTCAGCCGCTTATAGCCG CTACGCCACCAAGAAAACAAGGAACTCTTCAAAGAAGAAAGAGCAATGCGGCGAAAGAGA TTAAAATGGTTTTCGCTTCTCTGTATAATCAAGGGAAGAAGAAGAAGAAGCTTCAGAAAT CGAAGAGAAAAGAGAGAATCGAATCTTCTCCGATGGTGGAAGATGTAACGGAACCACCGC AATACCAATCGTTAATCCCACCACCGTCTCCGCCTCCTCCTCCACCACCACCTCCGCCTC CATTGCGATCGTCACAATCAGTATTCTACGGATTGTTCAAGAAAGGAGTTAAGAGCAACA AAAAGATTCATTCCGTTCCGGCGCCGCCTCCACCTCCACCGCCGAGATATACCCAATTTG ATCCTCAGACACCACCACGGAGAGTGAAATCCGGAAGACCTCCGCGTCCGACGAAACCGA AGAATTTCAATGAAGAGAACAACGGCCAAGGATCTCCGTTAATCCAAATTACGCCTCCAC CTCCACCACCGCCTCCGTTTAGAGTTCCGCCGCTAAAATATGTCGTGAGTGGTGATTTCG CGAAGATACGGAGTAATCAGAGCTCTAGATGTAGCTCCCCTGAACGGGAAGTGTTCGATA TCGGTTGGGGTCTAGAACTCACACAATCTGATGGCGGAGTTGAGACTAAAGCTGCCGTCA GCGGCGGCGGTATGCCGGGATTCTGCCCAAGCCCGGACGTTGATACGAAAGCCGACAATT TCATTGCCAGGCTTAGAGATGAGTGGAGGCTCGATAAGATCAATTCCGTGAATAGAAAGA GGTAACTGGGCTTTTTAAGGCCTATTATTAGGCCCATTACGAAAACGGCGTAGGTTTCAA CCTCTTATGCCCTGCAAGGCTGTGCAATGCACAAGGATCTCATACGAGAAACATCTTCAA GGGAAGTCGGTAAAAATTGTTGGAGATATTTTATATTTGATTGGCGAAATTCGTTGTGAT TTTAAGCAATGTGCAGCAAGGACTCGAGTTCAAAAGTTACGGGTAATATTGGCATTATTG GTATAGTTATTAGTGGTAAATGGTTTCAAACTGGCTGGTTAGTTTTTTGGGTTTAACCGG TTGAGGGATTTTGCTTTGGTGTGTTTTGATTATTCGGTTTGAACTTTGGAGTGTCAGATG AAAACTCAATAACTTCGGTGTTGAATGTTTTATATTTTGGTTGGTACGCATTGATGTATG TACAATGTATGGCCCATTGATATGAAAATATAGTTGTGGGCTCTGAGTTTTGTTGGGCCT ACCTCTTGTGACCTTTCCCTCTCCCTTACAAGCAATTCTTCTTCAAGTTGGTTGATGATT GTCATAATGACTGGTTGTCGTATGTATCTCTAAGAATAAATTCATTTGTGTGTTGAGTGA GATTCTTATAGCTTACTAGTAATATGTATATGATATGTCAACTGAATTCATGTTTTGCA