Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G57030.1
CDS Infomation	\| Lycopene beta/epsilon cyclase protein \| Chr5:23077398-23079818 FORWARD LENGTH=1575 \| 201606
Sequence	ATGGAGTGTGTTGGGGCTAGGAATTTCGCAGCAATGGCGGTTTCAACATTTCCGTCATGG AGTTGTCGAAGGAAATTTCCAGTGGTTAAGAGATACAGCTATAGGAATATTCGTTTCGGT TTGTGTAGTGTCAGAGCTAGCGGCGGCGGAAGTTCCGGTAGTGAGAGTTGTGTAGCGGTG AGAGAAGATTTCGCTGACGAAGAAGATTTTGTGAAAGCTGGTGGTTCTGAGATTCTATTT GTTCAAATGCAGCAGAACAAAGATATGGATGAACAGTCTAAGCTTGTTGATAAGTTGCCT CCTATATCAATTGGTGATGGTGCTTTGGATCTAGTGGTTATTGGTTGTGGTCCTGCTGGT TTAGCCTTGGCTGCAGAATCAGCTAAGCTTGGATTAAAAGTTGGACTCATTGGTCCAGAT CTTCCTTTTACTAACAATTACGGTGTTTGGGAAGATGAATTCAATGATCTTGGGCTGCAA AAATGTATTGAGCATGTTTGGAGAGAGACTATTGTGTATCTGGATGATGACAAGCCTATT ACCATTGGCCGTGCTTATGGAAGAGTTAGTCGACGTTTGCTCCATGAGGAGCTTTTGAGG AGGTGTGTCGAGTCAGGTGTCTCGTACCTTAGCTCGAAAGTTGACAGCATAACAGAAGCT TCTGATGGCCTTAGACTTGTTGCTTGTGACGACAATAACGTCATTCCCTGCAGGCTTGCC ACTGTTGCTTCTGGAGCAGCTTCGGGAAAGCTCTTGCAATACGAAGTTGGTGGACCTAGA GTCTGTGTGCAAACTGCATACGGCGTGGAGGTTGAGGTGGAAAATAGTCCATATGATCCA GATCAAATGGTTTTCATGGATTACAGAGATTATACTAACGAGAAAGTTCGGAGCTTAGAA GCTGAGTATCCAACGTTTCTGTACGCCATGCCTATGACAAAGTCAAGACTCTTCTTCGAG GAGACATGTTTGGCCTCAAAAGATGTCATGCCCTTTGATTTGCTAAAAACGAAGCTCATG TTAAGATTAGATACACTCGGAATTCGAATTCTAAAGACTTACGAAGAGGAGTGGTCCTAT ATCCCAGTTGGTGGTTCCTTGCCAAACACCGAACAAAAGAATCTCGCCTTTGGTGCTGCC GCTAGCATGGTACATCCCGCAACAGGCTATTCAGTTGTGAGATCTTTGTCTGAAGCTCCA AAATATGCATCAGTCATCGCAGAGATACTAAGAGAAGAGACTACCAAACAGATCAACAGT AATATTTCAAGACAAGCTTGGGATACTTTATGGCCACCAGAAAGGAAAAGACAGAGAGCA TTCTTTCTCTTTGGTCTTGCACTCATAGTTCAATTCGATACCGAAGGCATTAGAAGCTTC TTCCGTACTTTCTTCCGCCTTCCAAAATGGATGTGGCAAGGGTTTCTAGGATCAACATTA ACATCAGGAGATCTCGTTCTCTTTGCTTTATACATGTTCGTCATTTCACCAAACAATTTG AGAAAAGGTCTCATCAATCATCTCATCTCTGATCCAACCGGAGCAACCATGATAAAAACC TATCTCAAAGTATGA

Peptide Sequence

PEP ID	AT5G57030.1
PEP Infomation	\| Lycopene beta/epsilon cyclase protein \| Chr5:23077398-23079818 FORWARD LENGTH=524 \| 201606
Sequence	MECVGARNFAAMAVSTFPSWSCRRKFPVVKRYSYRNIRFGLCSVRASGGGSSGSESCVAV REDFADEEDFVKAGGSEILFVQMQQNKDMDEQSKLVDKLPPISIGDGALDLVVIGCGPAG LALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFNDLGLQKCIEHVWRETIVYLDDDKPI TIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSITEASDGLRLVACDDNNVIPCRLA TVASGAASGKLLQYEVGGPRVCVQTAYGVEVEVENSPYDPDQMVFMDYRDYTNEKVRSLE AEYPTFLYAMPMTKSRLFFEETCLASKDVMPFDLLKTKLMLRLDTLGIRILKTYEEEWSY IPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIAEILREETTKQINS NISRQAWDTLWPPERKRQRAFFLFGLALIVQFDTEGIRSFFRTFFRLPKWMWQGFLGSTL TSGDLVLFALYMFVISPNNLRKGLINHLISDPTGATMIKTYLKV

Transcript Sequence

Transcript ID	AT5G57030.1
Transcript Infomation	\| Lycopene beta/epsilon cyclase protein \| Chr5:23077120-23080096 FORWARD LENGTH=2131 \| 201606
Sequence	CTTACACGCGTTTTCACAAAAAGGACCTTACATGGGTTGTTCCCCCAATAAGAAAATTAC ACGTTGCAGAATCGAAGCAGTGGTCTATCCTTGTTATCGTCCTCTCGTCTTTATGGCTCT TCCAAGTCATTTTGAGAAATTTTCGATTTTGAGATTTTTTTCCAAATATTACAAAAGGAA ATAATTAGATTCCTCTTTCTGCTTGCTATACCTTGATAGAACAATATAACAATGGTGTAA GTCTTCTCGCTGTATTCGAAATTATTTGGAGGAGGAAAATGGAGTGTGTTGGGGCTAGGA ATTTCGCAGCAATGGCGGTTTCAACATTTCCGTCATGGAGTTGTCGAAGGAAATTTCCAG TGGTTAAGAGATACAGCTATAGGAATATTCGTTTCGGTTTGTGTAGTGTCAGAGCTAGCG GCGGCGGAAGTTCCGGTAGTGAGAGTTGTGTAGCGGTGAGAGAAGATTTCGCTGACGAAG AAGATTTTGTGAAAGCTGGTGGTTCTGAGATTCTATTTGTTCAAATGCAGCAGAACAAAG ATATGGATGAACAGTCTAAGCTTGTTGATAAGTTGCCTCCTATATCAATTGGTGATGGTG CTTTGGATCTAGTGGTTATTGGTTGTGGTCCTGCTGGTTTAGCCTTGGCTGCAGAATCAG CTAAGCTTGGATTAAAAGTTGGACTCATTGGTCCAGATCTTCCTTTTACTAACAATTACG GTGTTTGGGAAGATGAATTCAATGATCTTGGGCTGCAAAAATGTATTGAGCATGTTTGGA GAGAGACTATTGTGTATCTGGATGATGACAAGCCTATTACCATTGGCCGTGCTTATGGAA GAGTTAGTCGACGTTTGCTCCATGAGGAGCTTTTGAGGAGGTGTGTCGAGTCAGGTGTCT CGTACCTTAGCTCGAAAGTTGACAGCATAACAGAAGCTTCTGATGGCCTTAGACTTGTTG CTTGTGACGACAATAACGTCATTCCCTGCAGGCTTGCCACTGTTGCTTCTGGAGCAGCTT CGGGAAAGCTCTTGCAATACGAAGTTGGTGGACCTAGAGTCTGTGTGCAAACTGCATACG GCGTGGAGGTTGAGGTGGAAAATAGTCCATATGATCCAGATCAAATGGTTTTCATGGATT ACAGAGATTATACTAACGAGAAAGTTCGGAGCTTAGAAGCTGAGTATCCAACGTTTCTGT ACGCCATGCCTATGACAAAGTCAAGACTCTTCTTCGAGGAGACATGTTTGGCCTCAAAAG ATGTCATGCCCTTTGATTTGCTAAAAACGAAGCTCATGTTAAGATTAGATACACTCGGAA TTCGAATTCTAAAGACTTACGAAGAGGAGTGGTCCTATATCCCAGTTGGTGGTTCCTTGC CAAACACCGAACAAAAGAATCTCGCCTTTGGTGCTGCCGCTAGCATGGTACATCCCGCAA CAGGCTATTCAGTTGTGAGATCTTTGTCTGAAGCTCCAAAATATGCATCAGTCATCGCAG AGATACTAAGAGAAGAGACTACCAAACAGATCAACAGTAATATTTCAAGACAAGCTTGGG ATACTTTATGGCCACCAGAAAGGAAAAGACAGAGAGCATTCTTTCTCTTTGGTCTTGCAC TCATAGTTCAATTCGATACCGAAGGCATTAGAAGCTTCTTCCGTACTTTCTTCCGCCTTC CAAAATGGATGTGGCAAGGGTTTCTAGGATCAACATTAACATCAGGAGATCTCGTTCTCT TTGCTTTATACATGTTCGTCATTTCACCAAACAATTTGAGAAAAGGTCTCATCAATCATC TCATCTCTGATCCAACCGGAGCAACCATGATAAAAACCTATCTCAAAGTATGATTTACTT ATCAACTCTTAGGTTTGTGTATATATATGTTGATTTATCTGAATAATCGATCAAAGAATG GTATGTGGGTTACTAGGAAGTTGGAAACAAACATGTATAGAATCTAAGGAGTGATCGAAA TGGAGATGGAAACGAAAAGAAAAAAATCAGTCTTTGTTTTGTGGTTAGTGACCGAGAAAT GTTTAAATCAACAAGAGTAAAAATGTTCAACACATGCTTTTAATTTTTATCAATTTATTT CGCTTATATTGTTTACGATTGCCATTTATTT