Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G55860.1
CDS Infomation	\| weak chloroplast movement under blue light protein (DUF827) \| Chr5:22610146-22612166 FORWARD LENGTH=1950 \| 201606
Sequence	ATGGTTGCTAAGAAGGGACGTAGAGATTCTTCAGACTCTTCTCCAATTGTGGAGGTTGGA GAGATTGACACAAGTGCTCCTTTTCAATCTGTTAAAGATGCGGTTAACCTTTTCGGTGAA GCTGCTTTCTCCGCTGAGAAACCGGTTTTTCGAAAACCGAATCCTCAGTCTGCTGAGAAA GTTTTGGTGAAGCAAACAGAGCTTCACTTGGCTCAGAAAGAGTTGAATAAGTTGAAGGAA CAGCTTAAGAATGCTGAAACTATTAGAGAGCAAGCGTTGAGTGAGCTTGAATGGTCTAAA AGAACTGTTGATGAACTTACTCGTAAGCTTGAAGCGGTTAATGAGTCTAGAGATTCTGCA AATAAAGCTACTGAAGCTGCTAAGAGTCTAATTGAAGAAGCGAAACCGGGGAATGTTTCT GTAGCTAGTAGTAGTGATGCTCAGACTCGGGATATGGAAGAGTATGGGGAAGTATGTAAG GAACTTGATACCGCCAAGCAAGAGCTGAGGAAAATCCGTCAGGTTTCGAATGAGATTTTG GAAACAAAGACTGTTGCTTTAAGTAAAGTAGAGGAAGCTAAGAAAGTGAGTAAAGTTCAT TCTGAGAAGATTGAGTTGCTTAGAAAAGAAATTGCAGCTGTTAATGAATCAGTTGAACAG ACGAAGCTTGCGTGTTCTCAAGCCCGAAAGGAACAATCTGAGATATTTGCGGAGAAGGAG ATTCAGCAGAAATCGTATAAAGCTGGCATGGAAGAATCTGCCAAGAAATCACTTGCTTTG AAGAATGAATTTGACCCTGAATTTGCAAAGAAGCTTGAAGTGCAGTTGACTGAGACATAT AATGAGATCGATGAACTGCAGAAGCAAATGGAGACTGCGAAAGCATCGGATATAGATTCC GTAAATGGTGTGAGTTTGGAGTTGAATGAAGCTAAAGGTTTATTCGAGAAACTTGTGGAA GAAGAGAAGTCTTTGCAAGAGTTAGTGGAATCTCTTAAAGCAGAATTAAAGAATGTGAAG ATGGAGCATGATGAAGTTGAAGCGAAGGAAGCTGAAATTGAATCTGTGGCTGGAGATCTT CATCTGAAGCTTAGCAGAAGTAAGAGTGAGCTAGAACAATGTGTTACAGAGGAATCTAAA GCAAAGGCTGCTTTGGAAGATATGATGTTAACCATCAATCAGATATCTTCTGAGACTGAA GCTGCTCGACGAGAAGCTGAGGGAATGAGAAACAAAGCTAAGGAGTTAATGAAGGAAGCA GAATCTGCGCATCTGGCTCTTGAAGACTCAGAGCTACATCTAAGGGTCGCGTTAGATGAA GCCGAAGAAGCGAAAGCTGCCGAGACAAAGGCGCTTGAACAGATAAAGTCAATGTCTGAA AAAACCAACGCTGCACGTAATTCGACTTCATCTGAGTCTGGATCTCAGAGCATCACACTG TCTCAAGAGGAGTTCAAATCACTGAGCAAGAGAGCTGAGGTATTCGATAAGCTAGCAGAA ATGAAAGTGGCTGCTGCATTGGCTCAGGTGGAAGCAGTGAGAGCTAGCGAAAACGAGACA CTGAAGAAGTTAGAGACAACACAAGAAGAGATTAAGAAGCTAAAGACTGCAACAGAAGAG GCACTGAAGAAAGCAGCTATGGCTGATGCTGCCAAGAAAGCGGTTGAAGGAGAACTCAGG AGATGGCGAGAAAGAGATCAGAAGAAAGCAGAGGAAGCGGCGACAAGGATTCTCGCAGAA GCTGAGATGAAGATGGCCAGTGAATCATCACCGCAACAACATTACAAAGCTCCGAAACAG AAACCTGTCAATAACAAACTGGAGAAGACAAAAACATCTGTGGTATCAAAGAAAGTGCTT ATGCCGAATCTAAGTGGAATCTTCAACAGAAAGAAGAATCAAGTGGAATGGGGTTCTCCT TCATATCTCCCTGGAGAGAAACCCTTTTGA

Peptide Sequence

PEP ID	AT5G55860.1
PEP Infomation	\| weak chloroplast movement under blue light protein (DUF827) \| Chr5:22610146-22612166 FORWARD LENGTH=649 \| 201606
Sequence	MVAKKGRRDSSDSSPIVEVGEIDTSAPFQSVKDAVNLFGEAAFSAEKPVFRKPNPQSAEK VLVKQTELHLAQKELNKLKEQLKNAETIREQALSELEWSKRTVDELTRKLEAVNESRDSA NKATEAAKSLIEEAKPGNVSVASSSDAQTRDMEEYGEVCKELDTAKQELRKIRQVSNEIL ETKTVALSKVEEAKKVSKVHSEKIELLRKEIAAVNESVEQTKLACSQARKEQSEIFAEKE IQQKSYKAGMEESAKKSLALKNEFDPEFAKKLEVQLTETYNEIDELQKQMETAKASDIDS VNGVSLELNEAKGLFEKLVEEEKSLQELVESLKAELKNVKMEHDEVEAKEAEIESVAGDL HLKLSRSKSELEQCVTEESKAKAALEDMMLTINQISSETEAARREAEGMRNKAKELMKEA ESAHLALEDSELHLRVALDEAEEAKAAETKALEQIKSMSEKTNAARNSTSSESGSQSITL SQEEFKSLSKRAEVFDKLAEMKVAAALAQVEAVRASENETLKKLETTQEEIKKLKTATEE ALKKAAMADAAKKAVEGELRRWRERDQKKAEEAATRILAEAEMKMASESSPQQHYKAPKQ KPVNNKLEKTKTSVVSKKVLMPNLSGIFNRKKNQVEWGSPSYLPGEKPF

Transcript Sequence

Transcript ID	AT5G55860.1
Transcript Infomation	\| weak chloroplast movement under blue light protein (DUF827) \| Chr5:22609433-22612486 FORWARD LENGTH=2661 \| 201606
Sequence	AAATACACTTCCCTTTCTTGTCCCTCTCTCCTCTCTGTCTCTCTTCTTTCTCTCTCCTCG CCACTGACTTTGCTCTCTCTGATTTACAGAAGAAATTTCAAAACTTTCAAAAGCTCAAAT CTTTTTTCCCTTTTTCGATTATATTCATCGTCGTCGAGACCGGAGATATCTTTATCTGAT CAAAAGTTTCTTTTTTCCGATCGTCTTTTCTCTCCCAGAGAAAAATTAAAAATCGCTCCT TTAGATTATTTCCTTTATTTTCTTGGCGCGGTTTCGATTTCACGTTTCTGGGTTTTCTTC ATCGACCCAGAAAAACAAAAAAAATTCAAACCGCAACGATCAGGTAGTGAATCCTTGATT TTATAGTCTATATAAAGAAAGAAAATGCAAAATGGTTGCTAAGAAGGGACGTAGAGATTC TTCAGACTCTTCTCCAATTGTGGAGGTTGGAGAGATTGACACAAGTGCTCCTTTTCAATC TGTTAAAGATGCGGTTAACCTTTTCGGTGAAGCTGCTTTCTCCGCTGAGAAACCGGTTTT TCGAAAACCGAATCCTCAGTCTGCTGAGAAAGTTTTGGTGAAGCAAACAGAGCTTCACTT GGCTCAGAAAGAGTTGAATAAGTTGAAGGAACAGCTTAAGAATGCTGAAACTATTAGAGA GCAAGCGTTGAGTGAGCTTGAATGGTCTAAAAGAACTGTTGATGAACTTACTCGTAAGCT TGAAGCGGTTAATGAGTCTAGAGATTCTGCAAATAAAGCTACTGAAGCTGCTAAGAGTCT AATTGAAGAAGCGAAACCGGGGAATGTTTCTGTAGCTAGTAGTAGTGATGCTCAGACTCG GGATATGGAAGAGTATGGGGAAGTATGTAAGGAACTTGATACCGCCAAGCAAGAGCTGAG GAAAATCCGTCAGGTTTCGAATGAGATTTTGGAAACAAAGACTGTTGCTTTAAGTAAAGT AGAGGAAGCTAAGAAAGTGAGTAAAGTTCATTCTGAGAAGATTGAGTTGCTTAGAAAAGA AATTGCAGCTGTTAATGAATCAGTTGAACAGACGAAGCTTGCGTGTTCTCAAGCCCGAAA GGAACAATCTGAGATATTTGCGGAGAAGGAGATTCAGCAGAAATCGTATAAAGCTGGCAT GGAAGAATCTGCCAAGAAATCACTTGCTTTGAAGAATGAATTTGACCCTGAATTTGCAAA GAAGCTTGAAGTGCAGTTGACTGAGACATATAATGAGATCGATGAACTGCAGAAGCAAAT GGAGACTGCGAAAGCATCGGATATAGATTCCGTAAATGGTGTGAGTTTGGAGTTGAATGA AGCTAAAGGTTTATTCGAGAAACTTGTGGAAGAAGAGAAGTCTTTGCAAGAGTTAGTGGA ATCTCTTAAAGCAGAATTAAAGAATGTGAAGATGGAGCATGATGAAGTTGAAGCGAAGGA AGCTGAAATTGAATCTGTGGCTGGAGATCTTCATCTGAAGCTTAGCAGAAGTAAGAGTGA GCTAGAACAATGTGTTACAGAGGAATCTAAAGCAAAGGCTGCTTTGGAAGATATGATGTT AACCATCAATCAGATATCTTCTGAGACTGAAGCTGCTCGACGAGAAGCTGAGGGAATGAG AAACAAAGCTAAGGAGTTAATGAAGGAAGCAGAATCTGCGCATCTGGCTCTTGAAGACTC AGAGCTACATCTAAGGGTCGCGTTAGATGAAGCCGAAGAAGCGAAAGCTGCCGAGACAAA GGCGCTTGAACAGATAAAGTCAATGTCTGAAAAAACCAACGCTGCACGTAATTCGACTTC ATCTGAGTCTGGATCTCAGAGCATCACACTGTCTCAAGAGGAGTTCAAATCACTGAGCAA GAGAGCTGAGGTATTCGATAAGCTAGCAGAAATGAAAGTGGCTGCTGCATTGGCTCAGGT GGAAGCAGTGAGAGCTAGCGAAAACGAGACACTGAAGAAGTTAGAGACAACACAAGAAGA GATTAAGAAGCTAAAGACTGCAACAGAAGAGGCACTGAAGAAAGCAGCTATGGCTGATGC TGCCAAGAAAGCGGTTGAAGGAGAACTCAGGAGATGGCGAGAAAGAGATCAGAAGAAAGC AGAGGAAGCGGCGACAAGGATTCTCGCAGAAGCTGAGATGAAGATGGCCAGTGAATCATC ACCGCAACAACATTACAAAGCTCCGAAACAGAAACCTGTCAATAACAAACTGGAGAAGAC AAAAACATCTGTGGTATCAAAGAAAGTGCTTATGCCGAATCTAAGTGGAATCTTCAACAG AAAGAAGAATCAAGTGGAATGGGGTTCTCCTTCATATCTCCCTGGAGAGAAACCCTTTTG ATGATTTCTTCTTTTTCGAGAATTGAACTTTTTGTTTGTTGTGAACAATCCAGAAAGTTG TGTGCTTTTTTTGGTAAAAGAAGGTTTGTGGTTTGAGATCAGAAGCAGTTGCAGCTTTGG TCTAACGTGAGAAAACTGGTTGTTGCTGTAAATTGGATCAAAGCTATTTAGGTGGTTGTT TTACTTTGGCTCTTTGTTATGATTGTGAATGCTATTTGTTATTCTTGCATAAGCTTCAAC TTTACGATAAAATATAGAAATTAAATGGATTACACACTGAGCTAAGTTTATGAAGTCCTC CTAGGACCGAAATATTCTCGA