Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G55780.1
CDS Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr5:22576611-22578668 FORWARD LENGTH=2058 \| 201606
Sequence	ATGAGTGAAGTCGGTGTATTTCGTAAGGAGGAAATTGATGGAAAATTGTTTTTGGCTTAC ACATTAACACAAACAGAAACCCCAACGTCCTCCGGTGAAGCAGCTGCGGCGGCCAAAAAA GCTATGTATTTTGGCGTCGACGACCTCCCTCTTCAACCTCTTTTTTTCTGTCCTTCTGTC CGCATCAAATTTCTCCATTCCAAACCAAAAAACCATGATGATGATCATCATCATGGTGGT TTCATGCCTCATCCGTTAAATTCTACCCCTCACTTCCCTTGTACAAGAAGCCATGATCAA CAAGGCGAGTCGTTGCTTGATTGCGACAAAGATTATATCTGTAAGCTCCCTGTAATCCCT CTTTTTTGGTGCAACAATAAAGAATTTCGCTATGGCAAATTCGATTGTCGTGCATGTAAT GGGAATATTTTCAGCACAAGCTATTTTACATGTCTCCAGTGTCAAGGAAAGTTCCACAAA GAATGTGTAGAGTCTCCACTTGAGATCAAACACCCTTCCCACCCTTTTCATTCTCTTCGA CTTTTCAGTGGTTCAAGTAATCAGAAGTGTAGTTGCTGTAAAGTATATACACCAAATATG TATTATCATTGTACTACCTGCGAGTTGAGTATGAATCCAGTATGTGCAATGAGGCCGGTA CCCTTAGTTGTAGACCACCCAAAAAGCCACCCCCACCCTCTCTCCTTTTTCCCTACACAA GCTTCTACAGTTTGCAATATTTGTGCAATGATTAAGAAGCTTGATCCCACATACATCTGT ATCCAATGTGTTTTCGTAATCCATAAAGGTTGTATGGGTTTCCCACATATCATAAGGATA TCTCGTCACCCCCACCGTATCTCCTTTACCTCTTCTCTTCCACCTGGAAACTTTTCCTGC GGAGTATGTAGGCAACAAGTTGACAACAATTATGGTGCATACTCTTGCGAGATATGTGAT GATTATTTTGTTCATTCGAAATGTTCATTACTTCCAAGGATTTGGGACGGAAAAGAACTT GAAGGAGTACCAGAAGAAGATGATAAGATAGATGATGGGGAGCCGTTCAAGAGGATAGCT GATGGAATAATACTCCATCCTTTTCATAGTCACCATATGCGGCTTGAGATCGACAAAGCT TATGATGGAAATAAGTATTGTCGAGGATGTGCCCTTCCAATCTATGAAGGTCAATTCTAT TCATGCATGGAATGCGACTTCATCCTCCACGAAAGCTGTGCAAATGCTCCACGCATGAAA CGGTATCCCTTATATCCACATCCACTTACACTAAAAGGTACCACCACGAGACATGAGAAT CAAAAAGGTAAAGTTTGTTGTAGCGAATGCCGACGTGATTGCAATGGCTTCTTCTATGAG TATCGTAAAGAAAAAGAAATCTTCCAGCTAGACCTACGATGTGCCTCGATTATTGAACCA TTTGATTATCAAGGCCACCAACATCCCTTATTTCTACCTTGGGACACAAAGAAAAAGACA CGATGTCAAATGTGCAAATACGAAAGCAAGGAGTCAAAGTTAATTTGCTTGGAATGCGAT TATTCTATATGCTTCCGTTGTGCTACTTTTCCGTACAAGGCAAGGTATAAACATGATAGT CATTTCCTCACAATTTGTGATGGGAAAGAGGAAAGTGACGAACCAGATTGGTGTGAGGTT TGCGAAGGCAAAATAGAAGAAGTAAAAGAGACAGGGTATAACTGGAAAGGTAAAAAAACA GAATTGCGATACTACAAATGCAATGACTGCTGCACCGCTCTTCATGTTGATTGTTTATTT GGGAGAGACATGTACATTAAACCTGGTGAAACAGAAAAAGAGTATCTCTCTTTTTCCGAT TTCTCATTTAGCGAAGACGTTTGGAAATGGATGGATGTTCGGGCTCTTCTCAATAGTTCC CTCTCTCGACCAATTTGCAATGGATGCAAGTGCCGTTGTCCATTCCCAATATTTTACAAA GGGGACAAACTAATATTCTGTTCTTGGTATTGTCTTAAGATTGAGCATCCACCGACTCCC TCCCGTGTTTCTTGGTAA

Peptide Sequence

PEP ID	AT5G55780.1
PEP Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr5:22576611-22578668 FORWARD LENGTH=685 \| 201606
Sequence	MSEVGVFRKEEIDGKLFLAYTLTQTETPTSSGEAAAAAKKAMYFGVDDLPLQPLFFCPSV RIKFLHSKPKNHDDDHHHGGFMPHPLNSTPHFPCTRSHDQQGESLLDCDKDYICKLPVIP LFWCNNKEFRYGKFDCRACNGNIFSTSYFTCLQCQGKFHKECVESPLEIKHPSHPFHSLR LFSGSSNQKCSCCKVYTPNMYYHCTTCELSMNPVCAMRPVPLVVDHPKSHPHPLSFFPTQ ASTVCNICAMIKKLDPTYICIQCVFVIHKGCMGFPHIIRISRHPHRISFTSSLPPGNFSC GVCRQQVDNNYGAYSCEICDDYFVHSKCSLLPRIWDGKELEGVPEEDDKIDDGEPFKRIA DGIILHPFHSHHMRLEIDKAYDGNKYCRGCALPIYEGQFYSCMECDFILHESCANAPRMK RYPLYPHPLTLKGTTTRHENQKGKVCCSECRRDCNGFFYEYRKEKEIFQLDLRCASIIEP FDYQGHQHPLFLPWDTKKKTRCQMCKYESKESKLICLECDYSICFRCATFPYKARYKHDS HFLTICDGKEESDEPDWCEVCEGKIEEVKETGYNWKGKKTELRYYKCNDCCTALHVDCLF GRDMYIKPGETEKEYLSFSDFSFSEDVWKWMDVRALLNSSLSRPICNGCKCRCPFPIFYK GDKLIFCSWYCLKIEHPPTPSRVSW

Transcript Sequence

Transcript ID	AT5G55780.1
Transcript Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr5:22576493-22578682 FORWARD LENGTH=2190 \| 201606
Sequence	CAAGCATATAAAAAGACCAAGCTTAGCTGTATTCACAAGTTTGTATCATAAATGGCTGGC TAATATATGAGAAGAAGAAGATCACACAAAAGAAATCCAAATCCCCATCGTAGCAAACAT GAGTGAAGTCGGTGTATTTCGTAAGGAGGAAATTGATGGAAAATTGTTTTTGGCTTACAC ATTAACACAAACAGAAACCCCAACGTCCTCCGGTGAAGCAGCTGCGGCGGCCAAAAAAGC TATGTATTTTGGCGTCGACGACCTCCCTCTTCAACCTCTTTTTTTCTGTCCTTCTGTCCG CATCAAATTTCTCCATTCCAAACCAAAAAACCATGATGATGATCATCATCATGGTGGTTT CATGCCTCATCCGTTAAATTCTACCCCTCACTTCCCTTGTACAAGAAGCCATGATCAACA AGGCGAGTCGTTGCTTGATTGCGACAAAGATTATATCTGTAAGCTCCCTGTAATCCCTCT TTTTTGGTGCAACAATAAAGAATTTCGCTATGGCAAATTCGATTGTCGTGCATGTAATGG GAATATTTTCAGCACAAGCTATTTTACATGTCTCCAGTGTCAAGGAAAGTTCCACAAAGA ATGTGTAGAGTCTCCACTTGAGATCAAACACCCTTCCCACCCTTTTCATTCTCTTCGACT TTTCAGTGGTTCAAGTAATCAGAAGTGTAGTTGCTGTAAAGTATATACACCAAATATGTA TTATCATTGTACTACCTGCGAGTTGAGTATGAATCCAGTATGTGCAATGAGGCCGGTACC CTTAGTTGTAGACCACCCAAAAAGCCACCCCCACCCTCTCTCCTTTTTCCCTACACAAGC TTCTACAGTTTGCAATATTTGTGCAATGATTAAGAAGCTTGATCCCACATACATCTGTAT CCAATGTGTTTTCGTAATCCATAAAGGTTGTATGGGTTTCCCACATATCATAAGGATATC TCGTCACCCCCACCGTATCTCCTTTACCTCTTCTCTTCCACCTGGAAACTTTTCCTGCGG AGTATGTAGGCAACAAGTTGACAACAATTATGGTGCATACTCTTGCGAGATATGTGATGA TTATTTTGTTCATTCGAAATGTTCATTACTTCCAAGGATTTGGGACGGAAAAGAACTTGA AGGAGTACCAGAAGAAGATGATAAGATAGATGATGGGGAGCCGTTCAAGAGGATAGCTGA TGGAATAATACTCCATCCTTTTCATAGTCACCATATGCGGCTTGAGATCGACAAAGCTTA TGATGGAAATAAGTATTGTCGAGGATGTGCCCTTCCAATCTATGAAGGTCAATTCTATTC ATGCATGGAATGCGACTTCATCCTCCACGAAAGCTGTGCAAATGCTCCACGCATGAAACG GTATCCCTTATATCCACATCCACTTACACTAAAAGGTACCACCACGAGACATGAGAATCA AAAAGGTAAAGTTTGTTGTAGCGAATGCCGACGTGATTGCAATGGCTTCTTCTATGAGTA TCGTAAAGAAAAAGAAATCTTCCAGCTAGACCTACGATGTGCCTCGATTATTGAACCATT TGATTATCAAGGCCACCAACATCCCTTATTTCTACCTTGGGACACAAAGAAAAAGACACG ATGTCAAATGTGCAAATACGAAAGCAAGGAGTCAAAGTTAATTTGCTTGGAATGCGATTA TTCTATATGCTTCCGTTGTGCTACTTTTCCGTACAAGGCAAGGTATAAACATGATAGTCA TTTCCTCACAATTTGTGATGGGAAAGAGGAAAGTGACGAACCAGATTGGTGTGAGGTTTG CGAAGGCAAAATAGAAGAAGTAAAAGAGACAGGGTATAACTGGAAAGGTAAAAAAACAGA ATTGCGATACTACAAATGCAATGACTGCTGCACCGCTCTTCATGTTGATTGTTTATTTGG GAGAGACATGTACATTAAACCTGGTGAAACAGAAAAAGAGTATCTCTCTTTTTCCGATTT CTCATTTAGCGAAGACGTTTGGAAATGGATGGATGTTCGGGCTCTTCTCAATAGTTCCCT CTCTCGACCAATTTGCAATGGATGCAAGTGCCGTTGTCCATTCCCAATATTTTACAAAGG GGACAAACTAATATTCTGTTCTTGGTATTGTCTTAAGATTGAGCATCCACCGACTCCCTC CCGTGTTTCTTGGTAATTTGAAGTATTTTT