Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G55750.1
CDS Infomation

| hydroxyproline-rich glycoprotein family protein | Chr5:22564838-22566021 REVERSE LENGTH=528 | 201606
Sequence

ATGCACAAGCAAATCATGAGTTTGGTGGATACTTTTTCCAAACTTGTCCAAAAAGCCATC
ATCGATGCCTTCACTACATGGGCCAGAGCGATTGAATGTAATTGCAACTCGGGAGCATGC
AACAGCTTAGTTGGAGCCACATATTATCCATCGTGTAAACCCCGTCTTCAACGCTACTCT
CCATATGGTAACCCTCCTCCACCGTCTCCACAGTATTCACCACCCCCACCGCCTTCACAG
TCTTCACCGCCACGTTCTCGCTGCCCTCCTGTTCCGACGACAGGCTGTTGCAACCAACCA
CCAGGTCCACCACCTTCGACGATGTATTCTCCTCCGTATCCTTATTTTTATACTCCTCCT
TATCCTTACGGTACTATTGGCGGAGGGGGACAAGGCGGTGGCGGCCAAGGAGGAGGAGGA
GGAGGAGCCGAAGGCGGTACAACCGGTTCAGCGATGGCTTACTATTCCTCTTCCATTCCC
GTATATGTTTTGATGCTTGTGTTAGCTAATGCTTTTATTGTCTTTTAG

Peptide Sequence

PEP ID

AT5G55750.1
PEP Infomation

| hydroxyproline-rich glycoprotein family protein | Chr5:22564838-22566021 REVERSE LENGTH=175 | 201606
Sequence

MHKQIMSLVDTFSKLVQKAIIDAFTTWARAIECNCNSGACNSLVGATYYPSCKPRLQRYS
PYGNPPPPSPQYSPPPPPSQSSPPRSRCPPVPTTGCCNQPPGPPPSTMYSPPYPYFYTPP
YPYGTIGGGGQGGGGQGGGGGGAEGGTTGSAMAYYSSSIPVYVLMLVLANAFIVF

Transcript Sequence

Transcript ID

AT5G55750.1
Transcript Infomation

| hydroxyproline-rich glycoprotein family protein | Chr5:22564801-22566021 REVERSE LENGTH=565 | 201606
Sequence

ATGCACAAGCAAATCATGAGTTTGGTGGATACTTTTTCCAAACTTGTCCAAAAAGCCATC
ATCGATGCCTTCACTACATGGGCCAGAGCGATTGAATGTAATTGCAACTCGGGAGCATGC
AACAGCTTAGTTGGAGCCACATATTATCCATCGTGTAAACCCCGTCTTCAACGCTACTCT
CCATATGGTAACCCTCCTCCACCGTCTCCACAGTATTCACCACCCCCACCGCCTTCACAG
TCTTCACCGCCACGTTCTCGCTGCCCTCCTGTTCCGACGACAGGCTGTTGCAACCAACCA
CCAGGTCCACCACCTTCGACGATGTATTCTCCTCCGTATCCTTATTTTTATACTCCTCCT
TATCCTTACGGTACTATTGGCGGAGGGGGACAAGGCGGTGGCGGCCAAGGAGGAGGAGGA
GGAGGAGCCGAAGGCGGTACAACCGGTTCAGCGATGGCTTACTATTCCTCTTCCATTCCC
GTATATGTTTTGATGCTTGTGTTAGCTAATGCTTTTATTGTCTTTTAGGTCATACATAGG
TTTCAGATAAATATTAAAAGCCTAT