Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G55480.1
CDS Infomation	\| SHV3-like 1 \| Chr5:22474277-22477819 FORWARD LENGTH=2301 \| 201606
Sequence	ATGATAAACATGCGAGATAATCCAACAATGCATGTCTTACAAGCTTCAAAGTTTCTATTT TTAGCTCTTATTTTGATCCAGTTGCTGTCTACTCAACTCTTTGCTCAAAGATCTAAAAGT CCATGGCAAACACTCACTGGAGATGCTCCCCTTGTCATTGCTCGTGGTGGGTTTTCTGGG TTGTTGCCAGATTCAAGTCTCGATGCTTACAGTTTTGTATCGCAGACTAGTGTTCCTGGT GCTGTTCTTTGGTGTGATGTGCAACTAACGAAAGATGCAATTGGACTTTGCTTCCCTGAT GTGAAGATGATGAATGCTTCCAATATTCAAGATGTTTACCCTAAACGGAAAACTTCTTAC TTGCTTAATGGAGTCCCTACTCAGGATTGGTTCACCATTGATTTCAACTTCAAGGATCTG ACAAAAGTTATCTTGAAACAAGGAATATTATCACGGTCAGCGGCATTCGATGGAAACAGT TACGGGATATCGACAGTTAAAGATATATCTACGCAGTTAAAACCTGAGGGTTTTTGGTTA AATGTTCAGCACGACGCATTCTATGCTCAACATAATCTGAGCATGAGCAGCTTTCTGCTA TCAATTTCCAAGACTGTGATTATTGACTATCTCTCTTCCCCTGAGGTGAATTTCTTTCGG AACATTGGTAGGCGTTTTGGACGCAATGGGCCAAAGTTTGTGTTCCGGTTTCTTGAAAAA GATGATGTTGAGGTGTCAACCAACCAAACCTATGGATCTCTTGCGGGAAACCTAACATTC CTCAAGACTTTTGCTTCAGGAGTTCTTGTTCCCAAGTCTTACATATGGCCAATCGAAAGC CAATACTTGCTTCCCCGTACATCTTTTGTTCAAGATGCTCACAAAGCAGGATTAGAAGTA TATGCATCAGGTTTTGGAAACGATTTTGATCTTGCATACAACTACAGTTTTGATCCATTG GCCGAGTACTTATCTTTCATGGACAATGGAGATTTCTCCGTGGATGGCTTGCTTTCTGAT TTCCCACTAACAGCATCTTCAGCTGTTGACTGCTTCTCCCATCTTGGAAGTAATGCTTCA TCACAAGTGGATTTTCTTGTTATATCCAAAAATGGAGCAAGTGGAGACTACCCTGGCTGT ACTGACTTGGCCTATACAAAGGCTATCAAAGATGGTGCTGATGTTATCGATTGTTCTCTT CAAATGTCATCAGACGGGATTCCGTTTTGCTTAAGTTCAATAAATCTTGGGGAGAGCACG AACGTTGTCCAAAGTCCTTTCAGAAACCGTTCTACAACTGTTCCTGAGATCGGCTCACTT CCTGGAATATACAGCTTTAGTCTGGCATGGTCTGAGATTCAGACCTTGAGACCTGCTATT GAAAACCCCTACAGCAGGGAATTCACTATGTTTAGGAATCCAAGGGAGAGAAGTTCCGGG AAGTTTGTTTCACTTTCTGATTTCTTGAACTTGGCAAAAAACTCCAGCTCTCTCACCGGT GTTTTGATCAGCGTGGAGAATGCAACATATCTGAGAGAGAAGCAAGGGCTCGATGCTGTT AAGGCAGTTCTCGATACACTCACAGAAGCTGGTTACAGCAACAAGACAACAACCACAAGG GTTATGATTCAGTCAACTAACAGCTCAGTCTTAATTGACTTCAAGAAACAGAGCCGGTAT GAGACAGTGTACAAAGTCGAAGAAACCATCCGCGACATTCTCGACACTGCAATCGAAGAC ATTAAGAAATTTGCGGATGCTGTTGTCATTAGTAAAAAATCAGTCTTCCCCACCAGCGAA AGTTTCACCACTGGACAAACTAAACTAGTGGAGAGGCTGCAGAAGTTTCAGCTCCCCGTT TACGTTGAAGTGTTCCGAAATGAGTTTGTTTCTCAACCATGGGATTTCTTCGCTGATGCA ACTGTCGAGATAAACTCGCATGTTACTGGAGCTGGTATCAATGGAACCATCACTGAGTTC CCTCTCACAGCCGCGAGATACAAAAGGAACTCGTGCTTGACCCGCAAAGACGTGCCTCCT TACATGATCCCAGTTCAGCCCGCTGGCCTCTTAACCATCGTGAGTCCTGCTTCGTTACCT CCAGCCGAAGCACCAAGCCCAGTTTTCACAGATGCTGATGTCACTGAACCACCATTACCT CCAGTCTCAGCCAGAGCCCCAACCACCACCCCTGGACCTCAATCAACAGGTGAAAAGTCT CCCAACGGACAAACCCGAGTCGCTCTATCTCTTCTTCTCTCTGCATTCGCTACGGTTTTC GCCTCTCTTCTACTTCTGTGA

Peptide Sequence

PEP ID	AT5G55480.1
PEP Infomation	\| SHV3-like 1 \| Chr5:22474277-22477819 FORWARD LENGTH=766 \| 201606
Sequence	MINMRDNPTMHVLQASKFLFLALILIQLLSTQLFAQRSKSPWQTLTGDAPLVIARGGFSG LLPDSSLDAYSFVSQTSVPGAVLWCDVQLTKDAIGLCFPDVKMMNASNIQDVYPKRKTSY LLNGVPTQDWFTIDFNFKDLTKVILKQGILSRSAAFDGNSYGISTVKDISTQLKPEGFWL NVQHDAFYAQHNLSMSSFLLSISKTVIIDYLSSPEVNFFRNIGRRFGRNGPKFVFRFLEK DDVEVSTNQTYGSLAGNLTFLKTFASGVLVPKSYIWPIESQYLLPRTSFVQDAHKAGLEV YASGFGNDFDLAYNYSFDPLAEYLSFMDNGDFSVDGLLSDFPLTASSAVDCFSHLGSNAS SQVDFLVISKNGASGDYPGCTDLAYTKAIKDGADVIDCSLQMSSDGIPFCLSSINLGEST NVVQSPFRNRSTTVPEIGSLPGIYSFSLAWSEIQTLRPAIENPYSREFTMFRNPRERSSG KFVSLSDFLNLAKNSSSLTGVLISVENATYLREKQGLDAVKAVLDTLTEAGYSNKTTTTR VMIQSTNSSVLIDFKKQSRYETVYKVEETIRDILDTAIEDIKKFADAVVISKKSVFPTSE SFTTGQTKLVERLQKFQLPVYVEVFRNEFVSQPWDFFADATVEINSHVTGAGINGTITEF PLTAARYKRNSCLTRKDVPPYMIPVQPAGLLTIVSPASLPPAEAPSPVFTDADVTEPPLP PVSARAPTTTPGPQSTGEKSPNGQTRVALSLLLSAFATVFASLLLL

Transcript Sequence

Transcript ID	AT5G55480.1
Transcript Infomation	\| SHV3-like 1 \| Chr5:22474142-22478216 FORWARD LENGTH=2833 \| 201606
Sequence	CAACGATCATATAAATTCGAATCCCACAAACCAAAAAGCTCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTGAGTAAATCTCAGTTTTTGGTCGAAGTTGGTGAAGTCGCCGCCGGGACAA CTCAGGTTGTTACAGATGATAAACATGCGAGATAATCCAACAATGCATGTCTTACAAGCT TCAAAGTTTCTATTTTTAGCTCTTATTTTGATCCAGTTGCTGTCTACTCAACTCTTTGCT CAAAGATCTAAAAGTCCATGGCAAACACTCACTGGAGATGCTCCCCTTGTCATTGCTCGT GGTGGGTTTTCTGGGTTGTTGCCAGATTCAAGTCTCGATGCTTACAGTTTTGTATCGCAG ACTAGTGTTCCTGGTGCTGTTCTTTGGTGTGATGTGCAACTAACGAAAGATGCAATTGGA CTTTGCTTCCCTGATGTGAAGATGATGAATGCTTCCAATATTCAAGATGTTTACCCTAAA CGGAAAACTTCTTACTTGCTTAATGGAGTCCCTACTCAGGATTGGTTCACCATTGATTTC AACTTCAAGGATCTGACAAAAGTTATCTTGAAACAAGGAATATTATCACGGTCAGCGGCA TTCGATGGAAACAGTTACGGGATATCGACAGTTAAAGATATATCTACGCAGTTAAAACCT GAGGGTTTTTGGTTAAATGTTCAGCACGACGCATTCTATGCTCAACATAATCTGAGCATG AGCAGCTTTCTGCTATCAATTTCCAAGACTGTGATTATTGACTATCTCTCTTCCCCTGAG GTGAATTTCTTTCGGAACATTGGTAGGCGTTTTGGACGCAATGGGCCAAAGTTTGTGTTC CGGTTTCTTGAAAAAGATGATGTTGAGGTGTCAACCAACCAAACCTATGGATCTCTTGCG GGAAACCTAACATTCCTCAAGACTTTTGCTTCAGGAGTTCTTGTTCCCAAGTCTTACATA TGGCCAATCGAAAGCCAATACTTGCTTCCCCGTACATCTTTTGTTCAAGATGCTCACAAA GCAGGATTAGAAGTATATGCATCAGGTTTTGGAAACGATTTTGATCTTGCATACAACTAC AGTTTTGATCCATTGGCCGAGTACTTATCTTTCATGGACAATGGAGATTTCTCCGTGGAT GGCTTGCTTTCTGATTTCCCACTAACAGCATCTTCAGCTGTTGACTGCTTCTCCCATCTT GGAAGTAATGCTTCATCACAAGTGGATTTTCTTGTTATATCCAAAAATGGAGCAAGTGGA GACTACCCTGGCTGTACTGACTTGGCCTATACAAAGGCTATCAAAGATGGTGCTGATGTT ATCGATTGTTCTCTTCAAATGTCATCAGACGGGATTCCGTTTTGCTTAAGTTCAATAAAT CTTGGGGAGAGCACGAACGTTGTCCAAAGTCCTTTCAGAAACCGTTCTACAACTGTTCCT GAGATCGGCTCACTTCCTGGAATATACAGCTTTAGTCTGGCATGGTCTGAGATTCAGACC TTGAGACCTGCTATTGAAAACCCCTACAGCAGGGAATTCACTATGTTTAGGAATCCAAGG GAGAGAAGTTCCGGGAAGTTTGTTTCACTTTCTGATTTCTTGAACTTGGCAAAAAACTCC AGCTCTCTCACCGGTGTTTTGATCAGCGTGGAGAATGCAACATATCTGAGAGAGAAGCAA GGGCTCGATGCTGTTAAGGCAGTTCTCGATACACTCACAGAAGCTGGTTACAGCAACAAG ACAACAACCACAAGGGTTATGATTCAGTCAACTAACAGCTCAGTCTTAATTGACTTCAAG AAACAGAGCCGGTATGAGACAGTGTACAAAGTCGAAGAAACCATCCGCGACATTCTCGAC ACTGCAATCGAAGACATTAAGAAATTTGCGGATGCTGTTGTCATTAGTAAAAAATCAGTC TTCCCCACCAGCGAAAGTTTCACCACTGGACAAACTAAACTAGTGGAGAGGCTGCAGAAG TTTCAGCTCCCCGTTTACGTTGAAGTGTTCCGAAATGAGTTTGTTTCTCAACCATGGGAT TTCTTCGCTGATGCAACTGTCGAGATAAACTCGCATGTTACTGGAGCTGGTATCAATGGA ACCATCACTGAGTTCCCTCTCACAGCCGCGAGATACAAAAGGAACTCGTGCTTGACCCGC AAAGACGTGCCTCCTTACATGATCCCAGTTCAGCCCGCTGGCCTCTTAACCATCGTGAGT CCTGCTTCGTTACCTCCAGCCGAAGCACCAAGCCCAGTTTTCACAGATGCTGATGTCACT GAACCACCATTACCTCCAGTCTCAGCCAGAGCCCCAACCACCACCCCTGGACCTCAATCA ACAGGTGAAAAGTCTCCCAACGGACAAACCCGAGTCGCTCTATCTCTTCTTCTCTCTGCA TTCGCTACGGTTTTCGCCTCTCTTCTACTTCTGTGATCACATTGATCCGATCACCCGCGC CTGTAGGATTTCATTGTGAGATTGATCGAGTCCTCAGGGAATTTTTTTTCCTTCTAACAG TTCTTGGGATTCTTTGCAGTGATGAGTTTCTTGTCTGTTCATATTATTCGTTGTCTTTTG TAGAATTTCTGGCCAAAGAGGTAAAATTCTTGGACGTAAATTTGTATCATTGTTGTAACA TTATTCACTGTAATGTTCTATTTAAACTCTTGTCTTGTGTGTACGTACTTGTAACATTAT GATTGTTCTTTGAATATTGTTGTCTAATCGTAAAGATTGGGCTTTTAATACAGGCTACTT ATGGATCCAAATTAACTAAAATGGGCTTTAGTTTAAAGCCCAAGTACGTGATAATTCAAC AAACTTGACAACT