Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G55310.1
CDS Infomation	\| DNA topoisomerase 1 beta \| Chr5:22430389-22434590 REVERSE LENGTH=2754 \| 201606
Sequence	ATGGCCACTGAGGCGTTTGTGAAACCCGTTGTACCAAATGGTCATGACGGGTACGAAGAT GAAGATGAAGATGACATTCCTTTGGTTTTTAAGAGAAACAGTAATACAGCAGCTACAACA AATCGTCCTAGCCCTATTAATAATGCTATGAGAAACTCGGCTATTGGTTCCACCAAGTCC TCACCACCAATGAGGTCTCCTTTAACAAGCCCGAATAGGTCAGCTTCTTCATCCACTAGA AGTTCAATGATGAAACCAGCATTACCGTCATCTTCATCTGTTCAACGTTCGACTCTGAAG TCACCGTTGCGAGATGATAGATCTGTTGTTGCTAAGGAGAGGAACGGTTTTGGGAAAGCT CCTTCTGTGTCTAAAAGTGATGATGAGGATTCTGAGGATGATAAACCATTGAGTGCTAGG CTTAAATTGGATTCTAAAGAGGTTACCAAACAGCCAAGCTCTTCAGGACGTGGGAGTACG CAGCAAGCAGTACAAAAGAGCAACATGAGGCCTCAGGGATTGAGTGATTACACTAAAAAG AAAGTTTTGGATGAGAGAGCTCCCATGTCCTCAACGGTTCAGACAAAGACCAGTGTGGGT ACATCAAGTAGCAAGCCTGTTCATATTGAACAGAAGAGACCTTTGGTTAACAATATTGAT CGGAATGGTTTGAAACCTAAGACTGAAGGGCACAGTTCTCAGGCACCTGCTAAGAGACCT CTTGAAAAGGGGAGTTCTTCGAATCAATCTTCTGTTAAGAGGCCCAAGCTGTCAGAGCCA GCTAGACCAGTGAAAGTGGAGCAAGGTTCACATATTTCAGCTACGCAAGATGCCAAAGGA AAGAATCTGGATGCATCGAAGCCGTTGAGAGCTAACCAAGCAACTGTTAAAGAAGATAAC TCAGATGGTGATGATCATGTTCCTATTGCCTCAAGGATGAAGTCAGATTCCTCAAATAAT AAATCGTCTTCCGCAAAGCCAAGTTCTAGTAAAATGATAGCGTCTTCATCCAGAACAATA GCTCAAAAGCCCAACAAATGGGTGAAAGATTCTAAATATTCGAAATCTTCTAAATCATTA CCTTCTGGAGATGGGCAAAAGAAATGGAAAACTCTACAGCACAATGGTGTTATTTTTCCA CCTCCATATAAGCGTCATGGGGTTAAGATATTGTTCCAGGGAAAGCCTGTTGACTTAACT CCTGAACAAGAAGAGGTTGCAACTATGTTTGCGGTGATGAGGGAAACAGAATATTATAAA AAACCAAAGTTCAGAGAGAATTTCTGGAATGATTGGCGGAAACTACTTGGAAAGAACCAT ATGATTAAAAGTTTAGATGATTGTGACTTCACTCCCATATATGAATGGTATATGCAGGAG AAGGAGACAAAGAAACAAATGACTGCAGAAGAGAAAAGGATTGTGAAAGAGGAGAAATTA AAGCAGGAGGAGAAATATATGTGGGCTGTTCTTGATGGTGTCAGGGAGAGGATTGGAAAT TTCAGAGTTGAGCCCCCTGGGTTGTTTCGAGGCCGGGGAGAACATCCCAAGATGGGGAAA CTGAAAAAGCGGATTCGTCCTTGTGATATTACAATCAACATTGGTAAAGAGGCGCCTATT CCAGAATGCCCTATCCCTGGTGAAAGATGGAAAGAAGTTAAGCATGACAATACTGTTACC TGGCTTGCTTTTTGGAGTGATCCTATCAATCCAAAAGAGTTCAAGTATGTATTCTTGGCA GCTAGCAGTTCGTTGAAGGGACAAAGCGACAAAGAGAAGTATGAGAAAGCGAGGAAGCTA CATAACCATATAGGGAGTATTAGAGCAGCATACACCAAAGATTTTAATAACAAGGATGTA ACAAAGCGGCAAATAGCAGTGGCAACATATCTCATCGATAAGCTAGCCCTTAGGGCTGGA AATGAGAAGGATGACGATGAGGCAGATACTGTTGGTTGTTGTACATTGAAAGTAGGAAAC GTGGAGTGTATTCCTCCAAATAAGTTAAAGTTTGACTTCCTTGGTAAAGACTCTATTCAG TATGTAAACACAGTTGAGGTTGAGCCTCTGGTGTATAAGGCAATTGGGCAGTTCCAAGCA GGAAAATCGAAAACCGATGATCTCTTTGATGAGCTAGATACTTCAAAACTCAATACTCAT CTTAAGGAGCTTATGGCTGGTCTCACAGCCAAAGTATTCCGTACGTATAATGCATCCATC ACATTGGATTTAATGTTGAGTAAAGAAACCAGAGACGGTGACGTTCCTGAAAAAGTGGTG GTTTATCAGCAAGCGAACAAGGAGGTTGCTATCATTTGTAACCATCAACGTACTGTCTCG AAATCTCACGGAGCACAAGTGGAGAAGCTGGCTGTGAAAATAGAAGAACTAAGGGAGCAA ATAAAAGAGCTGAATATTGATCTCGACAGGGCTAAGAAAGGAAGAACACCGTTAATGGGA TCTGATGGAAAGAGAAAGAGGAACTTAACACCTGAAGCATTGGAGAAGAAGATAATGCAA ACGCAAGGTAAGATCGAGAAGATGGAAAGAGATATGCAAACAAAAGAAGATATGAAAACT GTCGCATTGGGCACATCTAAGATCAACTACATGGATCCTAGGATCACTGTTGCGTGGTGC AAACGACATGATGTCCCCATTGAGAAGATATTTAACAAGTCTCTTCTGGCTAAGTTCGCT TGGGCAATGGATGTTGATCCTGAGTTCAGATTCTGTTCAAGTACCGATGAATAA

Peptide Sequence

PEP ID	AT5G55310.1
PEP Infomation	\| DNA topoisomerase 1 beta \| Chr5:22430389-22434590 REVERSE LENGTH=917 \| 201606
Sequence	MATEAFVKPVVPNGHDGYEDEDEDDIPLVFKRNSNTAATTNRPSPINNAMRNSAIGSTKS SPPMRSPLTSPNRSASSSTRSSMMKPALPSSSSVQRSTLKSPLRDDRSVVAKERNGFGKA PSVSKSDDEDSEDDKPLSARLKLDSKEVTKQPSSSGRGSTQQAVQKSNMRPQGLSDYTKK KVLDERAPMSSTVQTKTSVGTSSSKPVHIEQKRPLVNNIDRNGLKPKTEGHSSQAPAKRP LEKGSSSNQSSVKRPKLSEPARPVKVEQGSHISATQDAKGKNLDASKPLRANQATVKEDN SDGDDHVPIASRMKSDSSNNKSSSAKPSSSKMIASSSRTIAQKPNKWVKDSKYSKSSKSL PSGDGQKKWKTLQHNGVIFPPPYKRHGVKILFQGKPVDLTPEQEEVATMFAVMRETEYYK KPKFRENFWNDWRKLLGKNHMIKSLDDCDFTPIYEWYMQEKETKKQMTAEEKRIVKEEKL KQEEKYMWAVLDGVRERIGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKEAPI PECPIPGERWKEVKHDNTVTWLAFWSDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKL HNHIGSIRAAYTKDFNNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGN VECIPPNKLKFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNTH LKELMAGLTAKVFRTYNASITLDLMLSKETRDGDVPEKVVVYQQANKEVAIICNHQRTVS KSHGAQVEKLAVKIEELREQIKELNIDLDRAKKGRTPLMGSDGKRKRNLTPEALEKKIMQ TQGKIEKMERDMQTKEDMKTVALGTSKINYMDPRITVAWCKRHDVPIEKIFNKSLLAKFA WAMDVDPEFRFCSSTDE

Transcript Sequence

Transcript ID	AT5G55310.1
Transcript Infomation	\| DNA topoisomerase 1 beta \| Chr5:22430105-22435134 REVERSE LENGTH=3197 \| 201606
Sequence	GGAGAGTCTTTCGTTAACTTAGCCTCTACAACACAAAAAACGGACAGAAATCAAAGGCAG GTAAGAAATCCGTGAGGCGTGTCCTGAGATTCATATCTGCTTCATCGCCGATTTCGTCGT GGCCTCAGTTTTGCTTGTGAATAACTTGCCTTGTTGGGTATGGCCACTGAGGCGTTTGTG AAACCCGTTGTACCAAATGGTCATGACGGGTACGAAGATGAAGATGAAGATGACATTCCT TTGGTTTTTAAGAGAAACAGTAATACAGCAGCTACAACAAATCGTCCTAGCCCTATTAAT AATGCTATGAGAAACTCGGCTATTGGTTCCACCAAGTCCTCACCACCAATGAGGTCTCCT TTAACAAGCCCGAATAGGTCAGCTTCTTCATCCACTAGAAGTTCAATGATGAAACCAGCA TTACCGTCATCTTCATCTGTTCAACGTTCGACTCTGAAGTCACCGTTGCGAGATGATAGA TCTGTTGTTGCTAAGGAGAGGAACGGTTTTGGGAAAGCTCCTTCTGTGTCTAAAAGTGAT GATGAGGATTCTGAGGATGATAAACCATTGAGTGCTAGGCTTAAATTGGATTCTAAAGAG GTTACCAAACAGCCAAGCTCTTCAGGACGTGGGAGTACGCAGCAAGCAGTACAAAAGAGC AACATGAGGCCTCAGGGATTGAGTGATTACACTAAAAAGAAAGTTTTGGATGAGAGAGCT CCCATGTCCTCAACGGTTCAGACAAAGACCAGTGTGGGTACATCAAGTAGCAAGCCTGTT CATATTGAACAGAAGAGACCTTTGGTTAACAATATTGATCGGAATGGTTTGAAACCTAAG ACTGAAGGGCACAGTTCTCAGGCACCTGCTAAGAGACCTCTTGAAAAGGGGAGTTCTTCG AATCAATCTTCTGTTAAGAGGCCCAAGCTGTCAGAGCCAGCTAGACCAGTGAAAGTGGAG CAAGGTTCACATATTTCAGCTACGCAAGATGCCAAAGGAAAGAATCTGGATGCATCGAAG CCGTTGAGAGCTAACCAAGCAACTGTTAAAGAAGATAACTCAGATGGTGATGATCATGTT CCTATTGCCTCAAGGATGAAGTCAGATTCCTCAAATAATAAATCGTCTTCCGCAAAGCCA AGTTCTAGTAAAATGATAGCGTCTTCATCCAGAACAATAGCTCAAAAGCCCAACAAATGG GTGAAAGATTCTAAATATTCGAAATCTTCTAAATCATTACCTTCTGGAGATGGGCAAAAG AAATGGAAAACTCTACAGCACAATGGTGTTATTTTTCCACCTCCATATAAGCGTCATGGG GTTAAGATATTGTTCCAGGGAAAGCCTGTTGACTTAACTCCTGAACAAGAAGAGGTTGCA ACTATGTTTGCGGTGATGAGGGAAACAGAATATTATAAAAAACCAAAGTTCAGAGAGAAT TTCTGGAATGATTGGCGGAAACTACTTGGAAAGAACCATATGATTAAAAGTTTAGATGAT TGTGACTTCACTCCCATATATGAATGGTATATGCAGGAGAAGGAGACAAAGAAACAAATG ACTGCAGAAGAGAAAAGGATTGTGAAAGAGGAGAAATTAAAGCAGGAGGAGAAATATATG TGGGCTGTTCTTGATGGTGTCAGGGAGAGGATTGGAAATTTCAGAGTTGAGCCCCCTGGG TTGTTTCGAGGCCGGGGAGAACATCCCAAGATGGGGAAACTGAAAAAGCGGATTCGTCCT TGTGATATTACAATCAACATTGGTAAAGAGGCGCCTATTCCAGAATGCCCTATCCCTGGT GAAAGATGGAAAGAAGTTAAGCATGACAATACTGTTACCTGGCTTGCTTTTTGGAGTGAT CCTATCAATCCAAAAGAGTTCAAGTATGTATTCTTGGCAGCTAGCAGTTCGTTGAAGGGA CAAAGCGACAAAGAGAAGTATGAGAAAGCGAGGAAGCTACATAACCATATAGGGAGTATT AGAGCAGCATACACCAAAGATTTTAATAACAAGGATGTAACAAAGCGGCAAATAGCAGTG GCAACATATCTCATCGATAAGCTAGCCCTTAGGGCTGGAAATGAGAAGGATGACGATGAG GCAGATACTGTTGGTTGTTGTACATTGAAAGTAGGAAACGTGGAGTGTATTCCTCCAAAT AAGTTAAAGTTTGACTTCCTTGGTAAAGACTCTATTCAGTATGTAAACACAGTTGAGGTT GAGCCTCTGGTGTATAAGGCAATTGGGCAGTTCCAAGCAGGAAAATCGAAAACCGATGAT CTCTTTGATGAGCTAGATACTTCAAAACTCAATACTCATCTTAAGGAGCTTATGGCTGGT CTCACAGCCAAAGTATTCCGTACGTATAATGCATCCATCACATTGGATTTAATGTTGAGT AAAGAAACCAGAGACGGTGACGTTCCTGAAAAAGTGGTGGTTTATCAGCAAGCGAACAAG GAGGTTGCTATCATTTGTAACCATCAACGTACTGTCTCGAAATCTCACGGAGCACAAGTG GAGAAGCTGGCTGTGAAAATAGAAGAACTAAGGGAGCAAATAAAAGAGCTGAATATTGAT CTCGACAGGGCTAAGAAAGGAAGAACACCGTTAATGGGATCTGATGGAAAGAGAAAGAGG AACTTAACACCTGAAGCATTGGAGAAGAAGATAATGCAAACGCAAGGTAAGATCGAGAAG ATGGAAAGAGATATGCAAACAAAAGAAGATATGAAAACTGTCGCATTGGGCACATCTAAG ATCAACTACATGGATCCTAGGATCACTGTTGCGTGGTGCAAACGACATGATGTCCCCATT GAGAAGATATTTAACAAGTCTCTTCTGGCTAAGTTCGCTTGGGCAATGGATGTTGATCCT GAGTTCAGATTCTGTTCAAGTACCGATGAATAAATACATGTTCGTTGAGGCCAGTTTCAC CTAACTACCATTCACCATACATTTACAGAGATATAGAGAGAAAGAGTTAAAAAGAGAAGA AGAATGATAGCAAGACCCTGTAAAAGAGGTTTCTTCTCTCTTATTAGTAAACCAAAGACT AATCTATGGATGTTTTATAGAAAAACAGTTACAATTTTTTACTCCAATAAATAAATAATT CAGGTTAATAATATTAAGAATTATACATAAAATGGTAGTACCTTTCTTTAATCTATATAC TATGGATGATTAATAAG