Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G55300.2
CDS Infomation	\| DNA topoisomerase I alpha \| Chr5:22424701-22429045 REVERSE LENGTH=2802 \| 201606
Sequence	ATGGGCACTGAAACAGTTTCAAAACCTGTGATGGATAATGGGTCTGGAGACAGTGATGAT GACAAGCCTTTAGCGTTCAAGAGGAATAATACAGTGGCTTCTAATTCGAATCAATCTAAA TCCAATTCCCAGAGAAGCAAGGCAGTTCCTACCACCAAGGTATCACCTATGAGATCACCT GTGACTAGCCCAAATGGAACCACTCCTTCGAATAAAACTTCTATAGTGAAATCCTCTATG CCATCATCTTCTTCTAAGGCTTCACCAGCAAAGTCACCATTGCGGAATGATATGCCCTCT ACTGTTAAGGATAGGAGCCAGTTACAGAAAGATCAGTCTGAATGTAAAATTGAGCATGAG GATTCTGAGGATGATAGACCTTTAAGTTCCATACTATCTGGAAATAAAGGGCCAACCTCT TCGCGGCAGGTTTCTTCACCGCAGCCAGAGAAAAAGAATAATGGTGATCGACCTCTTGAT AGAGCAAGCAGAATTATAAAAGACGAGTCAGATGATGAAACTCCAATCTCGTCAATGTTT CGGAAGAAGATTGATAGTGGGATGTCAGGGGGCAACCAGCTCTCCAATGATGAAAAGAAA CCTTTGGTTCAAAAGTTGCATCAGAATGGTTCCACAGTTAAGAATGAAGTGCCGAATGGT AAGGTATTAGGTAAGAGACCTCTGGAGAAGAATAGTTCTGCAGATCAATCTTCCTTGAAG AAGGCCAAAATATCAGCTTCACCTACTTCAGTGAAAATGAAACAAGATTCTGTCAAGAAA GAGATAGATGATAAGGGAAGGGTTTTGGTTTCACCAAAAATGAAAGCTAAACAGTTATCT ACCAGAGAAGATGGAACTGATGATGATGATGATGATGATGTTCCGATATCCAAGAGATTC AAATCAGATTCCTCCAACAGTAACACATCATCTGCAAAGCCAAAAGCAGTAAAACTAAAT TCTACTTCATCAGCTGCAAAGCCAAAAGCGAGAAATGTCGTTTCTCCTAGGTCCAGAGCA ATGACCAAAAACACTAAGAAAGTAACGAAGGACTCAAAATATTCCACGTCTTCAAAATCA TCACCTTCCTCTGGAGATGGGCAAAAGAAATGGACTACTTTGGTGCACAACGGTGTAATA TTTCCACCGCCATACAAGCCTCATGGCATTAAGATTTTGTACAAGGGGAAACCTGTTGAC CTAACTATTGAACAAGAAGAGGTTGCGACTATGTTTGCAGTGATGAGAGAGACAGATTAT TATACTAAACCTCAATTTCGGGAGAATTTCTGGAATGACTGGCGAAGACTGCTTGGCAAG AAACATGTGATACAGAAGTTGGATGATTGTGACTTTACTCCCATATATGAGTGGCATTTG GAAGAGAAAGAGAAGAAGAAACAAATGAGCACAGAGGAGAAAAAAGCTTTGAAAGAGGAG AAAATGAAGCAAGAGGAGAAATATATGTGGGCTGTTGTTGATGGTGTCAAAGAGAAGATT GGTAATTTCAGAGTGGAACCGCCTGGCCTTTTCAGAGGCCGTGGAGAACATCCCAAGATG GGAAAACTAAAGAAGCGTATCCATCCATGCGAGATCACCTTAAATATCGGGAAAGGTGCT CCTATTCCAGAATGTCCAATTGCTGGTGAAAGATGGAAAGAAGTAAAGCATGATAACACA GTCACCTGGCTAGCTTTCTGGGCTGATCCTATTAACCCAAAAGAATTCAAGTATGTATTT TTGGGAGCTGGCAGTTCTCTGAAAGGGCTGAGCGACAAAGAGAAGTACGAGAAAGCTAGG AATCTTACGGATCATATAGATAATATAAGAACAACATACACCAAGAATTTTACTGCCAAG GATGTTAAAATGAGGCAAATTGCTGTGGCGACATATCTCATTGATAAATTGGCGCTTAGG GCTGGAAATGAGAAGGATGATGATGAGGCCGACACTGTTGGTTGTTGTACTTTAAAAGTT GGAAATGTGGAGTGTATTCCTCCAAATAAAATAAAGTTTGATTTTCTTGGTAAGGATTCA ATCCAGTATGTGAACACAGTCGAGGTTGAGCCTCTTGTTTACAAGGCCATTGGACAGTTC CAGGCGGGAAAATCCAAAACAGATGATCTTTTTGATGAGTTAGACACAAGTAAACTGAAT GCTCATTTGAAGGAACTTGTGCCTGGTCTCACAGCTAAAGTATTCCGTACATATAATGCT TCCATCACTTTGGATGAAATGCTGAGTCAAGAAACCAAAGATGGCGATGTTACTCAAAAA ATAGTAGTTTATCAGAAAGCAAATAAGGAGGTTGCCATAATCTGCAATCATCAGCGTACT GTATCAAAGACACATGGTGCGCAAATTGAAAAATTGACTGCGAGAATAGAAGAACTCAAG GAGGTTCTTAAAGAGCTCAAAACTAATCTTGACCGGGCTAAAAAGGGAAAACCACCATTG GAAGGTTCTGATGGAAAGAAGATTAGAAGCTTAGAACCAAACGCGTGGGAGAAGAAGATT GCTCAACAGAGTGCTAAGATCGAGAAAATGGAACGAGACATGCATACAAAAGAGGACTTG AAAACAGTGGCACTGGGCACGTCTAAGATCAACTACCTGGATCCTAGAATCACAGTTGCA TGGTGCAAACGTCATGAAGTACCAATCGAAAAGATATTCACCAAGTCTCTTTTGGAGAAG TTTGCGTGGGCAATGGATGTAGAACCCGAAGCAAAGAGAAAACCGGCCTTTCTTCTATTC ATCTTCCTCCCTTGTTTAGAATTTTATTACCTTAGTGAGTAA

Peptide Sequence

PEP ID	AT5G55300.2
PEP Infomation	\| DNA topoisomerase I alpha \| Chr5:22424701-22429045 REVERSE LENGTH=933 \| 201606
Sequence	MGTETVSKPVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPMRSP VTSPNGTTPSNKTSIVKSSMPSSSSKASPAKSPLRNDMPSTVKDRSQLQKDQSECKIEHE DSEDDRPLSSILSGNKGPTSSRQVSSPQPEKKNNGDRPLDRASRIIKDESDDETPISSMF RKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTVKNEVPNGKVLGKRPLEKNSSADQSSLK KAKISASPTSVKMKQDSVKKEIDDKGRVLVSPKMKAKQLSTREDGTDDDDDDDVPISKRF KSDSSNSNTSSAKPKAVKLNSTSSAAKPKARNVVSPRSRAMTKNTKKVTKDSKYSTSSKS SPSSGDGQKKWTTLVHNGVIFPPPYKPHGIKILYKGKPVDLTIEQEEVATMFAVMRETDY YTKPQFRENFWNDWRRLLGKKHVIQKLDDCDFTPIYEWHLEEKEKKKQMSTEEKKALKEE KMKQEEKYMWAVVDGVKEKIGNFRVEPPGLFRGRGEHPKMGKLKKRIHPCEITLNIGKGA PIPECPIAGERWKEVKHDNTVTWLAFWADPINPKEFKYVFLGAGSSLKGLSDKEKYEKAR NLTDHIDNIRTTYTKNFTAKDVKMRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV GNVECIPPNKIKFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLN AHLKELVPGLTAKVFRTYNASITLDEMLSQETKDGDVTQKIVVYQKANKEVAIICNHQRT VSKTHGAQIEKLTARIEELKEVLKELKTNLDRAKKGKPPLEGSDGKKIRSLEPNAWEKKI AQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFTKSLLEK FAWAMDVEPEAKRKPAFLLFIFLPCLEFYYLSE

Transcript Sequence

Transcript ID	AT5G55300.2
Transcript Infomation	\| DNA topoisomerase I alpha \| Chr5:22424577-22429502 REVERSE LENGTH=3077 \| 201606
Sequence	TCTCCTCGTCCTTAAAACGATAGAAACCATCGAAGCAGAAGAGAAGAGAGAACAGAGAGA CGGAGGAGAGAGATAGGCTTCGCTAGACAATTTCTTCAATCTCTGGAAGAAGAAGTTGGT CTGAGCCTTCATCAACGTTGTTCTTTCGGGAATGGGCACTGAAACAGTTTCAAAACCTGT GATGGATAATGGGTCTGGAGACAGTGATGATGACAAGCCTTTAGCGTTCAAGAGGAATAA TACAGTGGCTTCTAATTCGAATCAATCTAAATCCAATTCCCAGAGAAGCAAGGCAGTTCC TACCACCAAGGTATCACCTATGAGATCACCTGTGACTAGCCCAAATGGAACCACTCCTTC GAATAAAACTTCTATAGTGAAATCCTCTATGCCATCATCTTCTTCTAAGGCTTCACCAGC AAAGTCACCATTGCGGAATGATATGCCCTCTACTGTTAAGGATAGGAGCCAGTTACAGAA AGATCAGTCTGAATGTAAAATTGAGCATGAGGATTCTGAGGATGATAGACCTTTAAGTTC CATACTATCTGGAAATAAAGGGCCAACCTCTTCGCGGCAGGTTTCTTCACCGCAGCCAGA GAAAAAGAATAATGGTGATCGACCTCTTGATAGAGCAAGCAGAATTATAAAAGACGAGTC AGATGATGAAACTCCAATCTCGTCAATGTTTCGGAAGAAGATTGATAGTGGGATGTCAGG GGGCAACCAGCTCTCCAATGATGAAAAGAAACCTTTGGTTCAAAAGTTGCATCAGAATGG TTCCACAGTTAAGAATGAAGTGCCGAATGGTAAGGTATTAGGTAAGAGACCTCTGGAGAA GAATAGTTCTGCAGATCAATCTTCCTTGAAGAAGGCCAAAATATCAGCTTCACCTACTTC AGTGAAAATGAAACAAGATTCTGTCAAGAAAGAGATAGATGATAAGGGAAGGGTTTTGGT TTCACCAAAAATGAAAGCTAAACAGTTATCTACCAGAGAAGATGGAACTGATGATGATGA TGATGATGATGTTCCGATATCCAAGAGATTCAAATCAGATTCCTCCAACAGTAACACATC ATCTGCAAAGCCAAAAGCAGTAAAACTAAATTCTACTTCATCAGCTGCAAAGCCAAAAGC GAGAAATGTCGTTTCTCCTAGGTCCAGAGCAATGACCAAAAACACTAAGAAAGTAACGAA GGACTCAAAATATTCCACGTCTTCAAAATCATCACCTTCCTCTGGAGATGGGCAAAAGAA ATGGACTACTTTGGTGCACAACGGTGTAATATTTCCACCGCCATACAAGCCTCATGGCAT TAAGATTTTGTACAAGGGGAAACCTGTTGACCTAACTATTGAACAAGAAGAGGTTGCGAC TATGTTTGCAGTGATGAGAGAGACAGATTATTATACTAAACCTCAATTTCGGGAGAATTT CTGGAATGACTGGCGAAGACTGCTTGGCAAGAAACATGTGATACAGAAGTTGGATGATTG TGACTTTACTCCCATATATGAGTGGCATTTGGAAGAGAAAGAGAAGAAGAAACAAATGAG CACAGAGGAGAAAAAAGCTTTGAAAGAGGAGAAAATGAAGCAAGAGGAGAAATATATGTG GGCTGTTGTTGATGGTGTCAAAGAGAAGATTGGTAATTTCAGAGTGGAACCGCCTGGCCT TTTCAGAGGCCGTGGAGAACATCCCAAGATGGGAAAACTAAAGAAGCGTATCCATCCATG CGAGATCACCTTAAATATCGGGAAAGGTGCTCCTATTCCAGAATGTCCAATTGCTGGTGA AAGATGGAAAGAAGTAAAGCATGATAACACAGTCACCTGGCTAGCTTTCTGGGCTGATCC TATTAACCCAAAAGAATTCAAGTATGTATTTTTGGGAGCTGGCAGTTCTCTGAAAGGGCT GAGCGACAAAGAGAAGTACGAGAAAGCTAGGAATCTTACGGATCATATAGATAATATAAG AACAACATACACCAAGAATTTTACTGCCAAGGATGTTAAAATGAGGCAAATTGCTGTGGC GACATATCTCATTGATAAATTGGCGCTTAGGGCTGGAAATGAGAAGGATGATGATGAGGC CGACACTGTTGGTTGTTGTACTTTAAAAGTTGGAAATGTGGAGTGTATTCCTCCAAATAA AATAAAGTTTGATTTTCTTGGTAAGGATTCAATCCAGTATGTGAACACAGTCGAGGTTGA GCCTCTTGTTTACAAGGCCATTGGACAGTTCCAGGCGGGAAAATCCAAAACAGATGATCT TTTTGATGAGTTAGACACAAGTAAACTGAATGCTCATTTGAAGGAACTTGTGCCTGGTCT CACAGCTAAAGTATTCCGTACATATAATGCTTCCATCACTTTGGATGAAATGCTGAGTCA AGAAACCAAAGATGGCGATGTTACTCAAAAAATAGTAGTTTATCAGAAAGCAAATAAGGA GGTTGCCATAATCTGCAATCATCAGCGTACTGTATCAAAGACACATGGTGCGCAAATTGA AAAATTGACTGCGAGAATAGAAGAACTCAAGGAGGTTCTTAAAGAGCTCAAAACTAATCT TGACCGGGCTAAAAAGGGAAAACCACCATTGGAAGGTTCTGATGGAAAGAAGATTAGAAG CTTAGAACCAAACGCGTGGGAGAAGAAGATTGCTCAACAGAGTGCTAAGATCGAGAAAAT GGAACGAGACATGCATACAAAAGAGGACTTGAAAACAGTGGCACTGGGCACGTCTAAGAT CAACTACCTGGATCCTAGAATCACAGTTGCATGGTGCAAACGTCATGAAGTACCAATCGA AAAGATATTCACCAAGTCTCTTTTGGAGAAGTTTGCGTGGGCAATGGATGTAGAACCCGA AGCAAAGAGAAAACCGGCCTTTCTTCTATTCATCTTCCTCCCTTGTTTAGAATTTTATTA CCTTAGTGAGTAAAAAACATGAACATGTCAAGCTGTTTCATTAGTGTCTTTTTTAACATT ACTATGACTCAAATGTTATGTTATTTGTAACATTACTATGATTAAAGAAATAGAAAATCC GAAGAAGAACAAAAACA