Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G54730.1
CDS Infomation	\| yeast autophagy 18 F-like protein \| Chr5:22233977-22236804 REVERSE LENGTH=2292 \| 201606
Sequence	ATGAAGAAAAACGGTGACGGTTCTTCTCCCAAGTCGCCAGACGGAGTTGTATCACGATCA GCTCGTAGCTCGTTTCGTGCTTTGTCTAATTGCCTTAAGGTGATTTCTTCTGGTGCTTCT ACTGTTGCTCGCTCCGCCGTATCTGCCGCTTCTTCCGCCGTTGAATCTCATCACGATCAG GTACTATGGGCGGGGTTTGATAATCTACAGAAAGAGGATGGTGATACACGAAGAGTTCTT CTACTAGCATTTAAGTCTGGATTTCAAGTTTGGGATGTTGAAGATACAGAGAATGTTCAT GTTATAGTTTCTGCACATGATGGACAAGCATTCTTTATGCAAATGCTACTGAATCCAATA AACTCTGGAGTTTTAGATGATAGGTTTTATAAGAGCCGTCCTCTTTTGGCTGTGTGTGGT GATTATTCAAGTAAAAAGATCAGTTCTGATAACCCCGGAAGTGAAACCGTAGCTACTCCT ACTAATGTCTATGTCTACTCGTTAAAGTCTCAGTCTTATGTGCATACGTTGAAATTCCGG GCTACCATCTATTCGGTTAGGTGCTGTTCTCGGATTGTTGCTGTACTACAAGCAGCTCAG ATAGATTGCTTTGATGCTGCAACACTGGAAATGGATTACAGGATTGTAACTAACTCCATT GTGTGTGGCTCCTTGGGTGTTGGATATGGCCCTCTTGCTGTTGGTCCACGATGGATTGCG TATAGTGGAAGTCGTATTGCTACCTCAAGTTCTGCAATTTTTACTTCAGAAATTGTCTCA CTGTCAACATCATCACCCAGTGTTGCACAATTTGCAAGAGACTCGAGTAAGCAGCTTGCT TCTGGGATAGCAAATCTTGGAGACAAAGGGTACAGATCATTGACTAAATACTGCTCAGAG GTTTTGCCCAATCCGTATATTCCTGGTTTGAAAGGCATTGGAGTTGGTAATGAAAAAGTA GCAGATGCAGAGAGCATAGGAATGGTTATTGTCAAAGATATCACAAACAAAAGCGTCATA ACGCAGTTTAAGGCACACAAGAGTCCGATTTCAGCTTTGTGCTTTGACCAAAGCGGCCTG CTTTTGGTGACTGCTTCGATTCAGGGGCATAATATTAACGTCTTTAGAATAATGCCAACA ATCTCTACAAGCAGAGCTGTGAAGACAACGACTTTTGCCCATCTGTTCAGGCTTCAGCGC GGTTTTACTAATGCGGTGATACAAGACATATGTTTCAGCAAGGATAGCAATTTGATTGTG GTTGGTTCTTCAAGAGGGACAAGTCATCTTTTTGAGATTAATCCTGAGAAAGAGGGGGAT GCTCCGGTTCCTATGTCTGCAATCAGTAGGATAAGAAGCGGAAACAGCAGCGGATGGATT GGGACTGTGAGCGGTGCAGCATCTGCAGCAGCTGGAATGGTTGCAGGCTCGGTTCCGGGT ACAGTCACATCCACTTTCTGTTACTGCGATGAAAAGAGTAACAATAACTACTATGGTTCT GTTGCTGATATGTGCTCCAAGACAAATCTTCTGGTGTTTGCTCCTTCTGGATGTATGACA CAGTATGCGTTACGGGAACATCAGGTTGGTGTTGGTCATGAGACTGCTGCAATGACGGGG TTTGATTCTGAGTCAGGTCTAGAGACAGAAGGAAAATTAGCGGTAGATCCAATAAGAAGG TGGTCCATGATCCAAAACCAATCTAGAAGAGAGACGCATGACCCCCACAGTGACATATAT GGAGGTGGAACATCAGTGGATTCTAAAAGTAAAGTGTTTCCAGAGGTTGTTAGAAAACAA AGTGTTGAGGAAGCTTGGAAAGTATCTAAGAAAGGAACTACCCGTGTGGTGGATAAGCGT CATTTGTACATATATGAAGCAGAACAACAGCAAACGCATCTGCCGACTCAGCTACCCTTA TGGGCAAGGCGAAAGTTTAGGTTTCAAGAATTGGTATTGAATCGGGGTGAAGAGATTAGT GGTGGAGGTGGAAGGGAGATGGAGATTGAAGGAATCCAAACTCGAACTATTGAAGCAAGA ACAAGAGATTTGGTTCCAGTCTGGGGTTATCTCCAATCTCCAAGGTCTCAGCAAGTGATA AACGAATCAATACAGAGTCCAAGTACCACTACACAAGATGACAAAGTGGCTACTCTGGAG GGTCATGGAACAGAGACTGATCTCGGTGCTGTACATAGCGAAGAACAGACACAAAGCGAG CCTGTAGATAAAGAAGGTATTGCAGAGGAGAAGAATCACAGTGAAGATGAGGATGAAGAG CAAGTGGATTAG

Peptide Sequence

PEP ID	AT5G54730.1
PEP Infomation	\| yeast autophagy 18 F-like protein \| Chr5:22233977-22236804 REVERSE LENGTH=763 \| 201606
Sequence	MKKNGDGSSPKSPDGVVSRSARSSFRALSNCLKVISSGASTVARSAVSAASSAVESHHDQ VLWAGFDNLQKEDGDTRRVLLLAFKSGFQVWDVEDTENVHVIVSAHDGQAFFMQMLLNPI NSGVLDDRFYKSRPLLAVCGDYSSKKISSDNPGSETVATPTNVYVYSLKSQSYVHTLKFR ATIYSVRCCSRIVAVLQAAQIDCFDAATLEMDYRIVTNSIVCGSLGVGYGPLAVGPRWIA YSGSRIATSSSAIFTSEIVSLSTSSPSVAQFARDSSKQLASGIANLGDKGYRSLTKYCSE VLPNPYIPGLKGIGVGNEKVADAESIGMVIVKDITNKSVITQFKAHKSPISALCFDQSGL LLVTASIQGHNINVFRIMPTISTSRAVKTTTFAHLFRLQRGFTNAVIQDICFSKDSNLIV VGSSRGTSHLFEINPEKEGDAPVPMSAISRIRSGNSSGWIGTVSGAASAAAGMVAGSVPG TVTSTFCYCDEKSNNNYYGSVADMCSKTNLLVFAPSGCMTQYALREHQVGVGHETAAMTG FDSESGLETEGKLAVDPIRRWSMIQNQSRRETHDPHSDIYGGGTSVDSKSKVFPEVVRKQ SVEEAWKVSKKGTTRVVDKRHLYIYEAEQQQTHLPTQLPLWARRKFRFQELVLNRGEEIS GGGGREMEIEGIQTRTIEARTRDLVPVWGYLQSPRSQQVINESIQSPSTTTQDDKVATLE GHGTETDLGAVHSEEQTQSEPVDKEGIAEEKNHSEDEDEEQVD

Transcript Sequence

Transcript ID	AT5G54730.1
Transcript Infomation	\| yeast autophagy 18 F-like protein \| Chr5:22233789-22237370 REVERSE LENGTH=3046 \| 201606
Sequence	AAATAAGAAACCAAAAACAAATCATTTATGAAGTTTTTTGAAACAACAGATTTCTAAAAC AACTCTTTAAAGGTCTTCTTCATCTTCGCTCTCTCTTCTTCTTATCCTCTAAATCTCTTC CCCTTTTCTTGCTCTTAAACGTTACCATAGTCCTAATCAGATTACTGTTTCCAAAGTCTT AATCTTTCTTTCTGGGTTTTTAATCTCTTCTAATTCTTTTCAATTTTTACAAGAAAAAAA AAACTCACAAATCATCGATTCGTTCTTCTGGGTTTTTGTAAAAATTCGATCTTTTTGTTT CTTTCTATTGATTGTGTGTGTTTCTTGCTTCGTGACATTTCAGAGTTTGCGTGTATTTTT GTTTCTATTTTTAAAAGATTCTAATCGAATTTGTTCAATTTCGCTCTTAAAAATTGTAAA TTTGATCTCTCCCCCGTCTTTCTCGTCGATTCATTTTTGCTTGGATATATCTCAGGCGTC GATATAGAGAATAAAAATCGACACTTTGTTTCATTTGGAGGCTAAAGATCAAAGCTTTTT GATAGTGAAGAGCCTCCTCCACCATTATGAAGAAAAACGGTGACGGTTCTTCTCCCAAGT CGCCAGACGGAGTTGTATCACGATCAGCTCGTAGCTCGTTTCGTGCTTTGTCTAATTGCC TTAAGGTGATTTCTTCTGGTGCTTCTACTGTTGCTCGCTCCGCCGTATCTGCCGCTTCTT CCGCCGTTGAATCTCATCACGATCAGGTACTATGGGCGGGGTTTGATAATCTACAGAAAG AGGATGGTGATACACGAAGAGTTCTTCTACTAGCATTTAAGTCTGGATTTCAAGTTTGGG ATGTTGAAGATACAGAGAATGTTCATGTTATAGTTTCTGCACATGATGGACAAGCATTCT TTATGCAAATGCTACTGAATCCAATAAACTCTGGAGTTTTAGATGATAGGTTTTATAAGA GCCGTCCTCTTTTGGCTGTGTGTGGTGATTATTCAAGTAAAAAGATCAGTTCTGATAACC CCGGAAGTGAAACCGTAGCTACTCCTACTAATGTCTATGTCTACTCGTTAAAGTCTCAGT CTTATGTGCATACGTTGAAATTCCGGGCTACCATCTATTCGGTTAGGTGCTGTTCTCGGA TTGTTGCTGTACTACAAGCAGCTCAGATAGATTGCTTTGATGCTGCAACACTGGAAATGG ATTACAGGATTGTAACTAACTCCATTGTGTGTGGCTCCTTGGGTGTTGGATATGGCCCTC TTGCTGTTGGTCCACGATGGATTGCGTATAGTGGAAGTCGTATTGCTACCTCAAGTTCTG CAATTTTTACTTCAGAAATTGTCTCACTGTCAACATCATCACCCAGTGTTGCACAATTTG CAAGAGACTCGAGTAAGCAGCTTGCTTCTGGGATAGCAAATCTTGGAGACAAAGGGTACA GATCATTGACTAAATACTGCTCAGAGGTTTTGCCCAATCCGTATATTCCTGGTTTGAAAG GCATTGGAGTTGGTAATGAAAAAGTAGCAGATGCAGAGAGCATAGGAATGGTTATTGTCA AAGATATCACAAACAAAAGCGTCATAACGCAGTTTAAGGCACACAAGAGTCCGATTTCAG CTTTGTGCTTTGACCAAAGCGGCCTGCTTTTGGTGACTGCTTCGATTCAGGGGCATAATA TTAACGTCTTTAGAATAATGCCAACAATCTCTACAAGCAGAGCTGTGAAGACAACGACTT TTGCCCATCTGTTCAGGCTTCAGCGCGGTTTTACTAATGCGGTGATACAAGACATATGTT TCAGCAAGGATAGCAATTTGATTGTGGTTGGTTCTTCAAGAGGGACAAGTCATCTTTTTG AGATTAATCCTGAGAAAGAGGGGGATGCTCCGGTTCCTATGTCTGCAATCAGTAGGATAA GAAGCGGAAACAGCAGCGGATGGATTGGGACTGTGAGCGGTGCAGCATCTGCAGCAGCTG GAATGGTTGCAGGCTCGGTTCCGGGTACAGTCACATCCACTTTCTGTTACTGCGATGAAA AGAGTAACAATAACTACTATGGTTCTGTTGCTGATATGTGCTCCAAGACAAATCTTCTGG TGTTTGCTCCTTCTGGATGTATGACACAGTATGCGTTACGGGAACATCAGGTTGGTGTTG GTCATGAGACTGCTGCAATGACGGGGTTTGATTCTGAGTCAGGTCTAGAGACAGAAGGAA AATTAGCGGTAGATCCAATAAGAAGGTGGTCCATGATCCAAAACCAATCTAGAAGAGAGA CGCATGACCCCCACAGTGACATATATGGAGGTGGAACATCAGTGGATTCTAAAAGTAAAG TGTTTCCAGAGGTTGTTAGAAAACAAAGTGTTGAGGAAGCTTGGAAAGTATCTAAGAAAG GAACTACCCGTGTGGTGGATAAGCGTCATTTGTACATATATGAAGCAGAACAACAGCAAA CGCATCTGCCGACTCAGCTACCCTTATGGGCAAGGCGAAAGTTTAGGTTTCAAGAATTGG TATTGAATCGGGGTGAAGAGATTAGTGGTGGAGGTGGAAGGGAGATGGAGATTGAAGGAA TCCAAACTCGAACTATTGAAGCAAGAACAAGAGATTTGGTTCCAGTCTGGGGTTATCTCC AATCTCCAAGGTCTCAGCAAGTGATAAACGAATCAATACAGAGTCCAAGTACCACTACAC AAGATGACAAAGTGGCTACTCTGGAGGGTCATGGAACAGAGACTGATCTCGGTGCTGTAC ATAGCGAAGAACAGACACAAAGCGAGCCTGTAGATAAAGAAGGTATTGCAGAGGAGAAGA ATCACAGTGAAGATGAGGATGAAGAGCAAGTGGATTAGAAGATTGGTTTATTTTTTCTCA CACATACTCGACTTCAACAACAGAATAGCAAAAAAATAACTCTGGAAAATTGTATAGAAA AGAAAGAGGAAAATTGACATATCTTTTAGATGTAAATAGCTTTAGTACTTTTTCTTCTTT TTTTTTTACAGAATATTATTAGCCCATTGATTCATGAACATAGTTA