Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G54680.1
CDS Infomation

| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr5:22217270-22218993 FORWARD LENGTH=705 | 201606
Sequence

ATGGTGTCACCCGAAAACGCTAATTGGATTTGTGACTTGATCGATGCTGATTACGGAAGT
TTCACAATCCAAGGTCCTGGTTTCTCTTGGCCTGTTCAGCAACCTATTGGTGTTTCTTCT
AACTCCAGTGCTGGAGTTGATGGCTCGGCTGGAAACTCAGAAGCTAGCAAAGAACCTGGA
TCCAAAAAGAGGGGGAGATGTGAATCATCCTCTGCCACTAGCTCGAAAGCATGTAGAGAG
AAGCAGCGACGGGACAGGTTGAATGACAAGTTTATGGAATTGGGTGCAATTTTGGAGCCT
GGAAATCCTCCCAAAACAGACAAGGCTGCTATCTTGGTTGATGCTGTCCGCATGGTGACA
CAGCTACGGGGCGAGGCCCAGAAGCTGAAGGACTCCAATTCAAGTCTTCAGGACAAAATC
AAAGAGTTAAAGACTGAGAAAAACGAGCTGCGAGATGAGAAACAGAGGCTGAAGACAGAG
AAAGAAAAGCTGGAGCAGCAGCTGAAAGCCATGAATGCTCCTCAACCAAGTTTTTTCCCA
GCCCCACCTATGATGCCTACTGCTTTTGCTTCAGCGCAAGGCCAAGCTCCTGGAAACAAG
ATGGTGCCAATCATCAGTTACCCAGGAGTTGCCATGTGGCAGTTCATGCCTCCTGCTTCA
GTCGATACTTCTCAGGATCATGTCCTTCGTCCTCCTGTTGCTTAA

Peptide Sequence

PEP ID

AT5G54680.1
PEP Infomation

| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr5:22217270-22218993 FORWARD LENGTH=234 | 201606
Sequence

MVSPENANWICDLIDADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEASKEPG
SKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVT
QLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFP
APPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA

Transcript Sequence

Transcript ID

AT5G54680.1
Transcript Infomation

| basic helix-loop-helix (bHLH) DNA-binding superfamily protein | Chr5:22216934-22219274 FORWARD LENGTH=1322 | 201606
Sequence

CGTAAAATGAATTAAAAATAAACTAACAAATAAAATAAAAACCCTTGGTATGATGGGCCT
TGGAAAGCCCAAAAAAAAAGGAAGAGTGCGCGTGAAAACCACTCTAATTTCTCTGGATTC
CAAGATTCCCCAATTCGTCTCCTCCAACAGTTTTCTTCTTCTCTTCTTCTTTGGGTGTTC
CTTCCACCAACGGCAGAAATCGATTTGGCTTAAATCTCCCCCTCCTTTCGATCTCTCTGA
TCGCCGCCGGGAACATTCAATTTCCCGGGAGTTCAACAAAAAAAAAACTCTCCGTTTTTA
TTTTTCCCCCTTTTTCACCGGTGGAAGTTTCCGGAGATGGTGTCACCCGAAAACGCTAAT
TGGATTTGTGACTTGATCGATGCTGATTACGGAAGTTTCACAATCCAAGGTCCTGGTTTC
TCTTGGCCTGTTCAGCAACCTATTGGTGTTTCTTCTAACTCCAGTGCTGGAGTTGATGGC
TCGGCTGGAAACTCAGAAGCTAGCAAAGAACCTGGATCCAAAAAGAGGGGGAGATGTGAA
TCATCCTCTGCCACTAGCTCGAAAGCATGTAGAGAGAAGCAGCGACGGGACAGGTTGAAT
GACAAGTTTATGGAATTGGGTGCAATTTTGGAGCCTGGAAATCCTCCCAAAACAGACAAG
GCTGCTATCTTGGTTGATGCTGTCCGCATGGTGACACAGCTACGGGGCGAGGCCCAGAAG
CTGAAGGACTCCAATTCAAGTCTTCAGGACAAAATCAAAGAGTTAAAGACTGAGAAAAAC
GAGCTGCGAGATGAGAAACAGAGGCTGAAGACAGAGAAAGAAAAGCTGGAGCAGCAGCTG
AAAGCCATGAATGCTCCTCAACCAAGTTTTTTCCCAGCCCCACCTATGATGCCTACTGCT
TTTGCTTCAGCGCAAGGCCAAGCTCCTGGAAACAAGATGGTGCCAATCATCAGTTACCCA
GGAGTTGCCATGTGGCAGTTCATGCCTCCTGCTTCAGTCGATACTTCTCAGGATCATGTC
CTTCGTCCTCCTGTTGCTTAATCAAGAAAAATCATCAACCGGTTTGCTTCTTGCTTCCGC
TTAAAAGAAAAGTCTCCATTTGTTTTGCTCTCCTCTCTTTCTCGGCTTTCTTAGTCTTAT
CCTTTTGCTTTGTCGTGTTATCATCGTAACTGTTATCTGTTGAACAATGATATGACATTG
TAAACTCCAATTGCTTCGCGCAATGTTATCTATTCACATGTAAATTTAAGTAGAGTTTGG
CAGATCGTCTCTCACTTTATGTGTTCTTACATTAATACATAGAATGTGGTTACTTCCTCG
CC