Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G54560.1
CDS Infomation

| hypothetical protein (DUF295) | Chr5:22161134-22162216 FORWARD LENGTH=1083 | 201606
Sequence

ATGTCTCTGCTTCTCAGCCGGCTCTCGAAGATTGCCCTTGGGAAACCTGCGTCCGTAAGA
TCTTCTCTTGTTCTTATTCTCTCTAATGGCTTCTCATCTTCCGCGCTACAAACCCATCCT
TGTCGCATCATGACTGCTCGTCCTTGTGGAGAGGATCTCGGAAAACTTATGATTATGGAG
AATGCTACTGATTGTAAAGTCACTCTTTTGGAAAAGAAGGTACCCATGGAGTTGGTGTAT
GTAGATGAAATTATAACGGTGGGATCATCTCATGGATGGGTAGCTTCTTTGAAGGACGAC
GGAATATTGCGTCTCCAAGACGATCTAAATCCATATGCATCGTATACAGACCCTAAACGC
ATCTCTCTGCCTCCTTTTGTAACTTTGCCTCGTTGCCAAACCCAAATTGTTACCAACGTG
GCCATGTCCTCCTCTTGTCCTGAGGATGAGAACTGTGTTGTGGCTGTCAAATTCTTGGGT
CCTCAACTCAGCTTTTGCAGACCGGCACAAAGTAACTCTGAGTGGACCAACATCAAGATC
GCAAGCCCTAGCTTCTTCTCGTCCGATGTCATGTATTCCAAGAAAGATGACATGTTTCGT
ATTCCCGGATCTGGAGGCCACCTCATCGGATCATGGGATCCCCGCACAGAGGATCACAAT
CCCAAGATTCAGAGGCTGCGATTCCGAAACCTTCCCGAGCTACCTAGGGCCAAGCGGGAG
CTTCTGGATTCGTGTTACAGGAGTGAACACTTGGTGGAGTCAAGAAACACCGGTGAAACT
TTCTTGGTAAAGCGGTACAAAAAGGCCACGACCAGAGATACGGTAAAAATGAAAACAAAA
GGTGTAATGGTGTTCAAGCTAGACGAAAAAGGGAACGCTGTTTACACTGAAGACATTGGA
GATCTTTGCATTTTTCTCTCAAAGTCTAAACCTTTCTGTGCTAGCAGCTCCAGGTTCCCT
AACTGCGTTGATATATGTGATGTCGACGAATTAGCAATTGCGTCTCTGACGTTTGACTCC
ATCAATGGTGTAACTCGTACAAACGGGGCACCTTACCATATTCCACCTCAAATTATAGTC
TAG

Peptide Sequence

PEP ID

AT5G54560.1
PEP Infomation

| hypothetical protein (DUF295) | Chr5:22161134-22162216 FORWARD LENGTH=360 | 201606
Sequence

MSLLLSRLSKIALGKPASVRSSLVLILSNGFSSSALQTHPCRIMTARPCGEDLGKLMIME
NATDCKVTLLEKKVPMELVYVDEIITVGSSHGWVASLKDDGILRLQDDLNPYASYTDPKR
ISLPPFVTLPRCQTQIVTNVAMSSSCPEDENCVVAVKFLGPQLSFCRPAQSNSEWTNIKI
ASPSFFSSDVMYSKKDDMFRIPGSGGHLIGSWDPRTEDHNPKIQRLRFRNLPELPRAKRE
LLDSCYRSEHLVESRNTGETFLVKRYKKATTRDTVKMKTKGVMVFKLDEKGNAVYTEDIG
DLCIFLSKSKPFCASSSRFPNCVDICDVDELAIASLTFDSINGVTRTNGAPYHIPPQIIV

Transcript Sequence

Transcript ID

AT5G54560.1
Transcript Infomation

| hypothetical protein (DUF295) | Chr5:22160931-22162513 FORWARD LENGTH=1583 | 201606
Sequence

TTTAGCATTAAAAGTAGAAAACCAGAAAAGGGAAGCTAATGATAGGTCGAGAGAAAAATC
TCAAAAAAAAGATCGTGTGTGAACACAATTAATTAGAAGATGGAAGACTTGGTGGGCAAG
GCCATTCCTCTGTATTAATTTTAGGTGGAGAAGATGTGAACATGTAAGGGTTTTGTTGCT
TCTCGCTAAGAACATCCTAATTCATGTCTCTGCTTCTCAGCCGGCTCTCGAAGATTGCCC
TTGGGAAACCTGCGTCCGTAAGATCTTCTCTTGTTCTTATTCTCTCTAATGGCTTCTCAT
CTTCCGCGCTACAAACCCATCCTTGTCGCATCATGACTGCTCGTCCTTGTGGAGAGGATC
TCGGAAAACTTATGATTATGGAGAATGCTACTGATTGTAAAGTCACTCTTTTGGAAAAGA
AGGTACCCATGGAGTTGGTGTATGTAGATGAAATTATAACGGTGGGATCATCTCATGGAT
GGGTAGCTTCTTTGAAGGACGACGGAATATTGCGTCTCCAAGACGATCTAAATCCATATG
CATCGTATACAGACCCTAAACGCATCTCTCTGCCTCCTTTTGTAACTTTGCCTCGTTGCC
AAACCCAAATTGTTACCAACGTGGCCATGTCCTCCTCTTGTCCTGAGGATGAGAACTGTG
TTGTGGCTGTCAAATTCTTGGGTCCTCAACTCAGCTTTTGCAGACCGGCACAAAGTAACT
CTGAGTGGACCAACATCAAGATCGCAAGCCCTAGCTTCTTCTCGTCCGATGTCATGTATT
CCAAGAAAGATGACATGTTTCGTATTCCCGGATCTGGAGGCCACCTCATCGGATCATGGG
ATCCCCGCACAGAGGATCACAATCCCAAGATTCAGAGGCTGCGATTCCGAAACCTTCCCG
AGCTACCTAGGGCCAAGCGGGAGCTTCTGGATTCGTGTTACAGGAGTGAACACTTGGTGG
AGTCAAGAAACACCGGTGAAACTTTCTTGGTAAAGCGGTACAAAAAGGCCACGACCAGAG
ATACGGTAAAAATGAAAACAAAAGGTGTAATGGTGTTCAAGCTAGACGAAAAAGGGAACG
CTGTTTACACTGAAGACATTGGAGATCTTTGCATTTTTCTCTCAAAGTCTAAACCTTTCT
GTGCTAGCAGCTCCAGGTTCCCTAACTGCGTTGATATATGTGATGTCGACGAATTAGCAA
TTGCGTCTCTGACGTTTGACTCCATCAATGGTGTAACTCGTACAAACGGGGCACCTTACC
ATATTCCACCTCAAATTATAGTCTAGTTGTTGTTTGGGATTTAGAGTTTGAGTCTAGAGT
CTGTTTTTTCTCTTAAACCTTGGAAACACCAAATCTATTATTTCAGTTTTCTCATGAAGT
AACTTGTTGATGGGTTTTCTTTTTACGGTTCTTCAGAAGGCTTTAACGTCTCTGCTACAG
TTTGTTGTTATCTGAATAAACGAAAAGATATTGAGTTCAAACCTGGATGCAAGTCACTAT
GCCCAGGAAACACGACAGAGTTCAAAATCCTTTAGTAACGTGTTTGTGTGTAATAGCTTT
CCAAAGTGACTTTAATATTCTTC