Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G54250.1
CDS Infomation	\| cyclic nucleotide-gated cation channel 4 \| Chr5:22025684-22029971 REVERSE LENGTH=2085 \| 201606
Sequence	ATGGCCACAGAACAAGAATTCACACGCGCATCACGCTTCTCACGTGACTCAAGCAGCGTT GGATATTACTCAGAAGAAGATAACACGGAGGAGGAAGATGAAGAAGAAGAAGAGATGGAA GAAATCGAAGAAGAGGAGGAAGAAGAGGAAGAAGAAGACCCACGTATAGGGCTCACGTGC GGAGGAAGAAGAAACGGGTCAAGTAATAACAACAAATGGATGATGTTGGGTCGAATACTT GACCCGAGATCCAAATGGGTTCGAGAATGGAACAAAGTCTTTCTCCTTGTATGCGCAACG GGTCTATTCGTAGACCCACTTTTTCTCTATACCCTATCAGTGAGCGACACGTGTATGTGT CTCCTCGTCGACGGTTGGCTTGCTCTTACCGTCACTGCCTTACGCTCCATGACCGATCTT TTGCACCTTTGGAACATTTGGATTCAGTTCAAGATTGCTCGCCGGTGGCCTTATCCCGGC GGAGATAGCGACGGCGATACCAACAAAGGAGGAGGGACACGTGGCTCTACGAGGGTTGCT CCACCTTACGTTAAGAAGAATGGGTTCTTCTTCGATCTCTTCGTCATATTACCATTACCT CAGGTGGTGTTGTGGGTAGTGATACCTTCTCTTCTAAAGAGAGGCTCTGTGACTTTAGTG GTGTCAGTTTTGCTTGTAACATTCCTCTTCCAATATCTACCGAAAATATATCACTCAATC CGCCATCTCCGCCGCAATGCTACTCTCTCGGGTTACATCTTCGGCACCGTTTGGTGGGGC ATTGCACTCAACATGATCGCTTATTTCGTCGCGGCTCATGCGGCAGGAGCGTGTTGGTAC TTGTTAGGAGTTCAAAGGTCAGCGAAATGTCTTAAGGAACAATGTGAAAACACGATAGGA TGCGACTTAAGGATGTTGTCATGTAAGGAACCGGTGTACTATGGAACGACCGTGATGGTC CTTGACAGAGCTAGACTTGCTTGGGCACAAAACCATCAAGCTCGATCTGTTTGCTTAGAT ATTAACACCAATTACACATATGGTGCTTATCAATGGACCATTCAACTTGTGAGCAGTGAG AGTCGGTTGGAGAAAATCCTTTTTCCTATCTTTTGGGGTCTCATGACTCTCAGCACATTT GGGAATTTGGAGAGCACAACAGAATGGTCGGAGGTTGTCTTCAATATCATAGTTCTAACA AGTGGTCTTCTTCTCGTTACCATGTTGATTGGTAACATCAAGGTATTTCTGCACGCTACA ACTTCAAAGAAGCAAGCAATGCACTTGAAAATGAGGAACATAGAGTGGTGGATGAAGAAG AGACATTTGCCAATAGGGTTTAGACAGCGAGTCCGCAACTATGAGCGGCAAAGATGGGCT GCTATGCGCGGTGTAGACGAGTGTGAAATGGTTCAGAACCTTCCAGAAGGTCTTAGGAGA GACATCAAGTACCACCTCTGTCTAGACTTAGTCCGGCAGGTTCCATTGTTTCAGCATATG GATGATTTGGTGCTTGAGAATATATGCGACCGTGTGAAGTCTCTCATTTTCACCAAAGGA GAAACAATTCAGAAAGAAGGAGATGCAGTACAGAGAATGTTATTCGTAGTGAGAGGTCAT CTTCAAAGCAGTCAGTTACTAAGAGACGGTGTCAAGAGCTGTTGCATGTTAGGTCCGGGA AATTTCAGCGGCGACGAGCTTCTCTCGTGGTGTCTCCGACGACCCTTCGTGGAGAGGCTA CCGCCTTCTTCTTCAACGCTTGTAACACTCGAGACCACCGAAGCGTTTGGCCTCGACGCC GAAGACGTTAAGTACGTGACGCAGCATTTTCGTTACACTTTTGTTAACGAGAAAGTCAAA CGTAGTGCTCGCTATTATTCTCCCGGATGGCGGACTTGGGCCGCGGTTGCGGTTCAGCTA GCTTGGCGAAGGTACAAGCATAGGCTAACGTTGACATCACTGTCGTTCATAAGGCCGAGA AGACCATTGTCAAGATGTGCGTCCTTAGGAGAAGACAAATTGAGGCTCTATGCAGCAATA TTAACCTCTCCTAAACCCAATCCCGACGATTTTGATGATTATTGA

Peptide Sequence

PEP ID	AT5G54250.1
PEP Infomation	\| cyclic nucleotide-gated cation channel 4 \| Chr5:22025684-22029971 REVERSE LENGTH=694 \| 201606
Sequence	MATEQEFTRASRFSRDSSSVGYYSEEDNTEEEDEEEEEMEEIEEEEEEEEEEDPRIGLTC GGRRNGSSNNNKWMMLGRILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVSDTCMC LLVDGWLALTVTALRSMTDLLHLWNIWIQFKIARRWPYPGGDSDGDTNKGGGTRGSTRVA PPYVKKNGFFFDLFVILPLPQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSI RHLRRNATLSGYIFGTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIG CDLRMLSCKEPVYYGTTVMVLDRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSSE SRLEKILFPIFWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHAT TSKKQAMHLKMRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRR DIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGH LQSSQLLRDGVKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDA EDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPR RPLSRCASLGEDKLRLYAAILTSPKPNPDDFDDY

Transcript Sequence

Transcript ID	AT5G54250.1
Transcript Infomation	\| cyclic nucleotide-gated cation channel 4 \| Chr5:22025536-22030080 REVERSE LENGTH=2342 \| 201606
Sequence	GAAAATTCTTCTTCATAATTAAGACAACGTTCATCTCCAAGATTTCTCTCCATTGTCGAC CTTCACAAAATAACTATCTCTCTCTGTGTTGCATGCGTTAGTACTTTCAATGGCCACAGA ACAAGAATTCACACGCGCATCACGCTTCTCACGTGACTCAAGCAGCGTTGGATATTACTC AGAAGAAGATAACACGGAGGAGGAAGATGAAGAAGAAGAAGAGATGGAAGAAATCGAAGA AGAGGAGGAAGAAGAGGAAGAAGAAGACCCACGTATAGGGCTCACGTGCGGAGGAAGAAG AAACGGGTCAAGTAATAACAACAAATGGATGATGTTGGGTCGAATACTTGACCCGAGATC CAAATGGGTTCGAGAATGGAACAAAGTCTTTCTCCTTGTATGCGCAACGGGTCTATTCGT AGACCCACTTTTTCTCTATACCCTATCAGTGAGCGACACGTGTATGTGTCTCCTCGTCGA CGGTTGGCTTGCTCTTACCGTCACTGCCTTACGCTCCATGACCGATCTTTTGCACCTTTG GAACATTTGGATTCAGTTCAAGATTGCTCGCCGGTGGCCTTATCCCGGCGGAGATAGCGA CGGCGATACCAACAAAGGAGGAGGGACACGTGGCTCTACGAGGGTTGCTCCACCTTACGT TAAGAAGAATGGGTTCTTCTTCGATCTCTTCGTCATATTACCATTACCTCAGGTGGTGTT GTGGGTAGTGATACCTTCTCTTCTAAAGAGAGGCTCTGTGACTTTAGTGGTGTCAGTTTT GCTTGTAACATTCCTCTTCCAATATCTACCGAAAATATATCACTCAATCCGCCATCTCCG CCGCAATGCTACTCTCTCGGGTTACATCTTCGGCACCGTTTGGTGGGGCATTGCACTCAA CATGATCGCTTATTTCGTCGCGGCTCATGCGGCAGGAGCGTGTTGGTACTTGTTAGGAGT TCAAAGGTCAGCGAAATGTCTTAAGGAACAATGTGAAAACACGATAGGATGCGACTTAAG GATGTTGTCATGTAAGGAACCGGTGTACTATGGAACGACCGTGATGGTCCTTGACAGAGC TAGACTTGCTTGGGCACAAAACCATCAAGCTCGATCTGTTTGCTTAGATATTAACACCAA TTACACATATGGTGCTTATCAATGGACCATTCAACTTGTGAGCAGTGAGAGTCGGTTGGA GAAAATCCTTTTTCCTATCTTTTGGGGTCTCATGACTCTCAGCACATTTGGGAATTTGGA GAGCACAACAGAATGGTCGGAGGTTGTCTTCAATATCATAGTTCTAACAAGTGGTCTTCT TCTCGTTACCATGTTGATTGGTAACATCAAGGTATTTCTGCACGCTACAACTTCAAAGAA GCAAGCAATGCACTTGAAAATGAGGAACATAGAGTGGTGGATGAAGAAGAGACATTTGCC AATAGGGTTTAGACAGCGAGTCCGCAACTATGAGCGGCAAAGATGGGCTGCTATGCGCGG TGTAGACGAGTGTGAAATGGTTCAGAACCTTCCAGAAGGTCTTAGGAGAGACATCAAGTA CCACCTCTGTCTAGACTTAGTCCGGCAGGTTCCATTGTTTCAGCATATGGATGATTTGGT GCTTGAGAATATATGCGACCGTGTGAAGTCTCTCATTTTCACCAAAGGAGAAACAATTCA GAAAGAAGGAGATGCAGTACAGAGAATGTTATTCGTAGTGAGAGGTCATCTTCAAAGCAG TCAGTTACTAAGAGACGGTGTCAAGAGCTGTTGCATGTTAGGTCCGGGAAATTTCAGCGG CGACGAGCTTCTCTCGTGGTGTCTCCGACGACCCTTCGTGGAGAGGCTACCGCCTTCTTC TTCAACGCTTGTAACACTCGAGACCACCGAAGCGTTTGGCCTCGACGCCGAAGACGTTAA GTACGTGACGCAGCATTTTCGTTACACTTTTGTTAACGAGAAAGTCAAACGTAGTGCTCG CTATTATTCTCCCGGATGGCGGACTTGGGCCGCGGTTGCGGTTCAGCTAGCTTGGCGAAG GTACAAGCATAGGCTAACGTTGACATCACTGTCGTTCATAAGGCCGAGAAGACCATTGTC AAGATGTGCGTCCTTAGGAGAAGACAAATTGAGGCTCTATGCAGCAATATTAACCTCTCC TAAACCCAATCCCGACGATTTTGATGATTATTGATTGAACTATTTTTTTGTTACGTTTGA TATACCTCAATTCTGGAACACTTAAGTGGTAACTATTTCCTCTTCTCATAGTTCATGTGG ATATTTTTTTCTCCTGCCGCCTTTTTATTTAGGTTTAACAAGTCATTAATGCCTCTACTA AT