Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G54200.1
CDS Infomation	\| Transducin/WD40 repeat-like superfamily protein \| Chr5:21993565-21997076 REVERSE LENGTH=2478 \| 201606
Sequence	ATGATGAAGATGATGATGATGAATCGAAGACGAAGCAACGTCGTTAGATTTGAAGCTAAG AAAGAAGACAAAGTAGAAGAAGAAGATAACAATGACGATTGTTTCTATGAGTCTCTAGAT CGTGTACTATCGTCTTGCTCTTGTTCAACTTCAAACTCTGATTACGACTCTGACCCGAAT GTTTCCGATTCGATCCACGATCCGACTCCGTTTCCTGTTCCTATGTTTACCTCTGGGTTC GAGCTGTGGAAATCTGAGCCTGAATCTGTGTCGGAGAGACGAATCAGGTTATTGCGTGGT TTGGGACTTAGTAATGAGCCGGATCTACCTCCGGCGAGTCAGTTACGTTCTAGAAGTCGG AGAAACAGTTCTCATTTCTCTAGATCGGTTCCTTCTGATGTTTTGACTTCGAATCATCAT GGTAAATGTGTGTTGAGATCAGATGTATCAGGTACTGACAATGTCGATCGAGAGTATACT GGATCTCGTATGCGAAACGATGGTGTTGATTTTATAAGCAAAGAGCCAATGGAAAGATCT CTTAGGGACATTGTAGAGAAAGAGAATGGTAGAGATGTTGTTTTAGAGGAGCAAATGTGT ACTATTAGGAATTTAGATACTGGGAGAGAGTTTGTGGTGAATGAAGTTCGAGAAGATGGG ATGTTGGAGAGGTTGAAGGAAGTAGGTACTGATCGGCAATTGACTCTGGAGGAGTTTGAG ATTTGTGTTGGTACGTCACCGATTGTGCTTGAGTTGATGAGGAGGCAAAATGTTGAAGAT GTTTGTAAAGACTCTGTGGATTTGGATACTAATGTTAGTGGAAGCAGGGTGACTAAACAT AGAAGGAGAGGGAGTTGGTTAAAGAGTATTAAGAATGTTGCTAGTAGTGTGACTGGGTAT AAAGAGCGACGGAGCACCGATGATAGGGATTCACCGTCTGAGAGAGGTGGTCAGAGGTTT AGCTCTGCAACTGATGATAGTCGAGATATGTCTTTTCATGACCCTGAGAGAGTTAAGGTT AGGCAGTATGGGAAGTCGTGTAAAGAGCTTACTGCACTTTTCAAGAGTCAAGAGATTCAA GCTCATAAAGGATCGATATGGAGTATTAAGTTTAGTTTGGATGGGAGGTATCTTGCTAGT GCTGGTGAGGATTGTGTTATTCAGATTTGGAAGGTTGTTGAGTCAGAAAGAAAAGGGGAA CTCTTGTCGATGGATAAACAAGAAGATGGAAGTATAAATTTGTTTCTTTTAGCAAATGGA TCACCCGAACCCGTTTCAATGTCTCCAAAGAGAAGAGGAAGAACATCTTTTAGCCGAAAA TCAGTGAGCTTGGACAATGTTCTTGTTCCAGAGGCAGTCTTTGGTCTTTCAGAGAAACCC GTGTGTTCATTTGTAGGGCATTTGGATGACGTACTTGATCTTTCGTGGTCAAAATCTCAG CACCTGCTTTCCTCTTCCATGGATAAGACTGTTCGTCTATGGGACTTATCTAGCAAGACA TGTTTGAAAGTCTTCTCACATAGTGACTACGTGACTTGCATCCAGTTTAATCCCGTGGAT GACAATTACTTCATCAGCGGATCATTGGATGCAAAAGTTCGGATATGGAGTATTCCTGAT CATCAAGTTGTTGATTGGAATGATCTTCATGAGATGGTCACAGCTGCTTGCTACACACCG GATGGACAGGGTGCATTGGTTGGTTCATACAAAGGAACATGCTGCTTATACAACACACAT GATAACAAACTGCAGCAGAGACGCGAAATCAATCTGAAGAACAGGAAAAAGAAAACCCAT CACAAGAAAATCACTGGTTTTCAGTTTGTGGCAGGAAGTTCATCGGAAGTTCTCGTCACA TCTGCAGATTCACGTACGCGTGTTGTTGATGGTGTTGACCTTGTTCACAAGTTTAAAGGA TTTCGCAACACGAATAGCCAAATCTCGGCTTCACTTACATCAAACGGGAAATTCCTAGTA TCAGCAAGCGAAGACTCTAATGTGTATGTATGGAACTACGACTCAGACTCTCGAGCAGGA AGAAGCAAACGTGTCACAGTCACAAACTCATACGAAAACTTTTATTGTCGTGACGTCTCT GTGGCTGCACCTTGGCCTGGCAAAATCAGTAACAACCACACTAACAACAGCCCCGAACAG TCATCCTTCACAGCCAATAATAACCCTCCGACACCTGTCAACGATCCAACCAACAACAAA ACCGTCACCAACGGTATCATTTCAAGCGCCACAAACCGATACTTCTTCGATAGAGTCTCA GCAACATGGCCTGAAGAAAAACTCTTGCTGGCTGCAAAAAACCGAGCCAGAACAAGCCCT CGTGTGAGCGTGGACATGTCTAACATACAGGTTAACACAAAACCGAGTGCCTCGGCGTGG TCTATGGTGATTGTGACTGGCAGTCTACGAGGCGAAATCAGAATATTTCAGAATTTTGGA TTTCCAGTTCGTCTATGA

Peptide Sequence

PEP ID	AT5G54200.1
PEP Infomation	\| Transducin/WD40 repeat-like superfamily protein \| Chr5:21993565-21997076 REVERSE LENGTH=825 \| 201606
Sequence	MMKMMMMNRRRSNVVRFEAKKEDKVEEEDNNDDCFYESLDRVLSSCSCSTSNSDYDSDPN VSDSIHDPTPFPVPMFTSGFELWKSEPESVSERRIRLLRGLGLSNEPDLPPASQLRSRSR RNSSHFSRSVPSDVLTSNHHGKCVLRSDVSGTDNVDREYTGSRMRNDGVDFISKEPMERS LRDIVEKENGRDVVLEEQMCTIRNLDTGREFVVNEVREDGMLERLKEVGTDRQLTLEEFE ICVGTSPIVLELMRRQNVEDVCKDSVDLDTNVSGSRVTKHRRRGSWLKSIKNVASSVTGY KERRSTDDRDSPSERGGQRFSSATDDSRDMSFHDPERVKVRQYGKSCKELTALFKSQEIQ AHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQEDGSINLFLLANG SPEPVSMSPKRRGRTSFSRKSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSWSKSQ HLLSSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPD HQVVDWNDLHEMVTAACYTPDGQGALVGSYKGTCCLYNTHDNKLQQRREINLKNRKKKTH HKKITGFQFVAGSSSEVLVTSADSRTRVVDGVDLVHKFKGFRNTNSQISASLTSNGKFLV SASEDSNVYVWNYDSDSRAGRSKRVTVTNSYENFYCRDVSVAAPWPGKISNNHTNNSPEQ SSFTANNNPPTPVNDPTNNKTVTNGIISSATNRYFFDRVSATWPEEKLLLAAKNRARTSP RVSVDMSNIQVNTKPSASAWSMVIVTGSLRGEIRIFQNFGFPVRL

Transcript Sequence

Transcript ID	AT5G54200.1
Transcript Infomation	\| Transducin/WD40 repeat-like superfamily protein \| Chr5:21993154-21997326 REVERSE LENGTH=3139 \| 201606
Sequence	CCTCCTTCCTCTCTCTGGAGTCTGGACATTAAACACTAAAACAGTTTATTTCTATTTTTC TCTTTCCTCTCTCCATTAATCTCCGATCTGACTCCTCTCTTACTCAACCTCCATTGGCGA ACTTCGTTTTTGATTCTCGTAATCCCTAATTCCTCTTCTCGAACCTCTCACAGTCAAAAA TTTCTCCAACCAAAGACTGTAGCAGAGAGAGACAAAGTCATTTTCAGATGATAATACTTT TGCTTCAGTCATGATGAAGATGATGATGATGAATCGAAGACGAAGCAACGTCGTTAGATT TGAAGCTAAGAAAGAAGACAAAGTAGAAGAAGAAGATAACAATGACGATTGTTTCTATGA GTCTCTAGATCGTGTACTATCGTCTTGCTCTTGTTCAACTTCAAACTCTGATTACGACTC TGACCCGAATGTTTCCGATTCGATCCACGATCCGACTCCGTTTCCTGTTCCTATGTTTAC CTCTGGGTTCGAGCTGTGGAAATCTGAGCCTGAATCTGTGTCGGAGAGACGAATCAGGTT ATTGCGTGGTTTGGGACTTAGTAATGAGCCGGATCTACCTCCGGCGAGTCAGTTACGTTC TAGAAGTCGGAGAAACAGTTCTCATTTCTCTAGATCGGTTCCTTCTGATGTTTTGACTTC GAATCATCATGGTAAATGTGTGTTGAGATCAGATGTATCAGGTACTGACAATGTCGATCG AGAGTATACTGGATCTCGTATGCGAAACGATGGTGTTGATTTTATAAGCAAAGAGCCAAT GGAAAGATCTCTTAGGGACATTGTAGAGAAAGAGAATGGTAGAGATGTTGTTTTAGAGGA GCAAATGTGTACTATTAGGAATTTAGATACTGGGAGAGAGTTTGTGGTGAATGAAGTTCG AGAAGATGGGATGTTGGAGAGGTTGAAGGAAGTAGGTACTGATCGGCAATTGACTCTGGA GGAGTTTGAGATTTGTGTTGGTACGTCACCGATTGTGCTTGAGTTGATGAGGAGGCAAAA TGTTGAAGATGTTTGTAAAGACTCTGTGGATTTGGATACTAATGTTAGTGGAAGCAGGGT GACTAAACATAGAAGGAGAGGGAGTTGGTTAAAGAGTATTAAGAATGTTGCTAGTAGTGT GACTGGGTATAAAGAGCGACGGAGCACCGATGATAGGGATTCACCGTCTGAGAGAGGTGG TCAGAGGTTTAGCTCTGCAACTGATGATAGTCGAGATATGTCTTTTCATGACCCTGAGAG AGTTAAGGTTAGGCAGTATGGGAAGTCGTGTAAAGAGCTTACTGCACTTTTCAAGAGTCA AGAGATTCAAGCTCATAAAGGATCGATATGGAGTATTAAGTTTAGTTTGGATGGGAGGTA TCTTGCTAGTGCTGGTGAGGATTGTGTTATTCAGATTTGGAAGGTTGTTGAGTCAGAAAG AAAAGGGGAACTCTTGTCGATGGATAAACAAGAAGATGGAAGTATAAATTTGTTTCTTTT AGCAAATGGATCACCCGAACCCGTTTCAATGTCTCCAAAGAGAAGAGGAAGAACATCTTT TAGCCGAAAATCAGTGAGCTTGGACAATGTTCTTGTTCCAGAGGCAGTCTTTGGTCTTTC AGAGAAACCCGTGTGTTCATTTGTAGGGCATTTGGATGACGTACTTGATCTTTCGTGGTC AAAATCTCAGCACCTGCTTTCCTCTTCCATGGATAAGACTGTTCGTCTATGGGACTTATC TAGCAAGACATGTTTGAAAGTCTTCTCACATAGTGACTACGTGACTTGCATCCAGTTTAA TCCCGTGGATGACAATTACTTCATCAGCGGATCATTGGATGCAAAAGTTCGGATATGGAG TATTCCTGATCATCAAGTTGTTGATTGGAATGATCTTCATGAGATGGTCACAGCTGCTTG CTACACACCGGATGGACAGGGTGCATTGGTTGGTTCATACAAAGGAACATGCTGCTTATA CAACACACATGATAACAAACTGCAGCAGAGACGCGAAATCAATCTGAAGAACAGGAAAAA GAAAACCCATCACAAGAAAATCACTGGTTTTCAGTTTGTGGCAGGAAGTTCATCGGAAGT TCTCGTCACATCTGCAGATTCACGTACGCGTGTTGTTGATGGTGTTGACCTTGTTCACAA GTTTAAAGGATTTCGCAACACGAATAGCCAAATCTCGGCTTCACTTACATCAAACGGGAA ATTCCTAGTATCAGCAAGCGAAGACTCTAATGTGTATGTATGGAACTACGACTCAGACTC TCGAGCAGGAAGAAGCAAACGTGTCACAGTCACAAACTCATACGAAAACTTTTATTGTCG TGACGTCTCTGTGGCTGCACCTTGGCCTGGCAAAATCAGTAACAACCACACTAACAACAG CCCCGAACAGTCATCCTTCACAGCCAATAATAACCCTCCGACACCTGTCAACGATCCAAC CAACAACAAAACCGTCACCAACGGTATCATTTCAAGCGCCACAAACCGATACTTCTTCGA TAGAGTCTCAGCAACATGGCCTGAAGAAAAACTCTTGCTGGCTGCAAAAAACCGAGCCAG AACAAGCCCTCGTGTGAGCGTGGACATGTCTAACATACAGGTTAACACAAAACCGAGTGC CTCGGCGTGGTCTATGGTGATTGTGACTGGCAGTCTACGAGGCGAAATCAGAATATTTCA GAATTTTGGATTTCCAGTTCGTCTATGATGCAAGGAGAAGGTTTTACAATATCAAAATCC TAAGGCAAAGTGAAATTTTCCCTTAGTAAAACCATCTCCTGTCAAAAGTGTATAGATTGA GAGAAGGTTTGGTTCATCCACTGACTTCTCTCGTTTTTTTTTTTTACCACGCTTCTTTTA TTTATCTGATTTGTTATCTCTAAAATTCAAATCTCTAGCAAATATATATAATGTTATTTT TAAGAAAGATTCAAATAGGCAGAAAAAGAAACTTCATATACCAATATAGTTTGCTTCGAT GAAAGTCTGTGCTATTCAACTTGAAGTTTGTAGAATTTGTCTCTGATATTATAACTCTTC AAGGAGAGAATATATGGTAAACTTTTGTATACACATTTTGTAATTGTCTTTAGGTTTATC TTTACATGTAAAATAATTG