Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G54090.1
CDS Infomation	\| DNA mismatch repair protein MutS%2C type 2 \| Chr5:21948283-21952550 REVERSE LENGTH=2391 \| 201606
Sequence	ATGCAGACTTTATCAATAGCTTTCTGCAACAGTGCCCTAGTGATAAGAAGAAGAAACTCT ATCGGAAACAGAAACAGAGTAAAGTTGAGTTTAATCTCGTCTTCTTCTCCGACTCTTGTT TGCCATTCAAAGTCTAAATCTCAAACCGATAGCTTGAGGGTGTTGGAATGGGACAAGCTC TGCGATGTTGTCGCTTCTTTTGCTCGTACTTCTTTAGGCCGAGAAGCTACAAAGAAAAAG CTTTGGTCTCTTGACCAGAGTTTCAGTGAAAGTTTGAAACTTTTAGATGAAACTGATGCC GCCATTAAAATGCTTGAACATGGTTCCTTCTGTCTTGACCTCTCCAGTATTCATATCTCC CTCGTTGAATCGGGAATTCGTCATGCTAAGAGGAGGCTTTCTTTACGAGCAGACCAAGCA CTTGAAGTTGCTTCTCTTCTTAGGTTCTTCGAAAATTTGCAGCTTGATTTGAAAGCTGCC ATTAAGCAAGATGGAGATTGGTACAAACGGTTTATGCCTTTATCTGAATTGATAGTGCAC CCTGTGATTAATAGATCATTTGTCAAGTTGGTTGAACAAGTTATAGATCCTGATGGTACA ATCAAAGATTCCGCGAGTAGTGCCCTGAGACAATCACGTGAACGAGTGCAGACACTTGAA AGAAAGCTGCAGCAACTGCTGGATGCTATCATAAGGAGCCAAAAGGATGACGAATCTGTC ATGTTAGCGGCTGAAATTGATGGAAGATGGTGTATACAAATGAGCTCAAATCAGCTAACT TCTGTTAATGGTCTTCTGCTTTCCAGTGGTTCAGGTGGAGGGACTGCGGCGGAGCCAATA GCTGCGGTGTCTATGAATGATGACCTTCAAAGTGCGAGAGCATCAGTTGCAAAGGCTGAG GCAGAGATTCTTTCAATGTTAACTGAAAAGATGCAAGATGGTCTTTGTCAAATCGAGGTG GTGTTGAGCTACTCGATTCAGCTGGATGTGATAAACGCTCGAGCAACTTACAGTCGTGCA TATGGTGGTGCACATCCTGATATATACTTGCCACCTGAAGATGAGGTTGAATCTTTGTCT GCTGGAGAAAACTCGCCGGATATTAACTTACCGAGTGAGAAACCGCTTTCTAAAAAAGAA TGGTTGCTGTATCTACCTAGATGTTATCATCCTCTATTGCTTTACCAACACAAGAAAGGC ATAAGAAAGACGCGGGAGACGGTAAAATTTCATAAAACAGCAGACACTGTATTATCAGGA GCTCCACCAATTCCGGCTGATTTCCAGATCTCTAAGGGCACTAGAGTTTTGGTTATTACC GGTCCAAACACAGGAGGTAAAACCATTTGCTTGAAATCAGTTGGGCTCGCTGCGATGATG GCAAAATCGGGTCTTTATGTTCTAGCAACTGAATCTGCACGCATACCTTGGTTTGACAAT ATTTATGCTGATATTGGTGATGAACAATCTTTGCTGCAGTCACTTTCTACCTTTTCTGGT CATTTGAAACAAATAAGTGAAATTCTCTCGCATTCAACGAGCAGATCACTTGTGTTGTTA GATGAAGTTGGAGCTGGAACAAATCCCCTTGAAGGAGCTGCATTAGGGATGGCAATTCTC GAATCTTTTGCAGAAAGCGGTTCTTTACTCACGATGGCAACCACACATCATGGAGAGCTT AAGACGCTTAAATACAGCAATTCCGCCTTTGAGAATGCTTGCATGGAGTTTGATGACCTG AACCTAAAACCCACTTACAAAATTCTATGGGGAGTACCAGGTCGGTCGAATGCAATAAAC ATAGCCGATAGGTTGGGGCTTCCATGTGATATCATCGAAAGTGCTCGTGAACTCTATGGC TCTGCAAGTGCTGAGATCAATGAGGTCATACTTGACATGGAACGGTACAAGCAAGAATAT CAGAGACTTTTGAATGAGTCACGTGTTTATATAAGGCTCTCAAGAGAGCTTCATGAGAAT CTACTCACAGCACAAAAGAACATTAACGATCATTCCACCAAAGAGAGACGAAAAATGAGA CAAGAACTAACTCAGGCTGGTTCGATGACTCGTTCTACACTTCGCAGAACATTGCAACAG TTTCGCTCATCTGCTGGAAAATCTTCTCAGTCAAAGGTAGCTACGCAACTCCAAACAAAA GTCAAAACGACGAAGGATGAAGATAATGGAATTCGTTCATCATCTGTGGTAGAGAGACGA CCACTTCCTGAAGCTGCGGCTCAAAAGGTTCCTGAAGTCGGTAGCTCGGTGTTTGTTTCT TCTCTTGGTAAAAAAGCGACCGTTTTGAAGGTAGAACATTCGAAGAAAGAGATCTTAGTG CAAGTAGGCATCATGAAGATGAAAGTGAAACTGACTGATGTTGTGGCCTGA

Peptide Sequence

PEP ID	AT5G54090.1
PEP Infomation	\| DNA mismatch repair protein MutS%2C type 2 \| Chr5:21948283-21952550 REVERSE LENGTH=796 \| 201606
Sequence	MQTLSIAFCNSALVIRRRNSIGNRNRVKLSLISSSSPTLVCHSKSKSQTDSLRVLEWDKL CDVVASFARTSLGREATKKKLWSLDQSFSESLKLLDETDAAIKMLEHGSFCLDLSSIHIS LVESGIRHAKRRLSLRADQALEVASLLRFFENLQLDLKAAIKQDGDWYKRFMPLSELIVH PVINRSFVKLVEQVIDPDGTIKDSASSALRQSRERVQTLERKLQQLLDAIIRSQKDDESV MLAAEIDGRWCIQMSSNQLTSVNGLLLSSGSGGGTAAEPIAAVSMNDDLQSARASVAKAE AEILSMLTEKMQDGLCQIEVVLSYSIQLDVINARATYSRAYGGAHPDIYLPPEDEVESLS AGENSPDINLPSEKPLSKKEWLLYLPRCYHPLLLYQHKKGIRKTRETVKFHKTADTVLSG APPIPADFQISKGTRVLVITGPNTGGKTICLKSVGLAAMMAKSGLYVLATESARIPWFDN IYADIGDEQSLLQSLSTFSGHLKQISEILSHSTSRSLVLLDEVGAGTNPLEGAALGMAIL ESFAESGSLLTMATTHHGELKTLKYSNSAFENACMEFDDLNLKPTYKILWGVPGRSNAIN IADRLGLPCDIIESARELYGSASAEINEVILDMERYKQEYQRLLNESRVYIRLSRELHEN LLTAQKNINDHSTKERRKMRQELTQAGSMTRSTLRRTLQQFRSSAGKSSQSKVATQLQTK VKTTKDEDNGIRSSSVVERRPLPEAAAQKVPEVGSSVFVSSLGKKATVLKVEHSKKEILV QVGIMKMKVKLTDVVA

Transcript Sequence

Transcript ID	AT5G54090.1
Transcript Infomation	\| DNA mismatch repair protein MutS%2C type 2 \| Chr5:21948124-21952594 REVERSE LENGTH=2594 \| 201606
Sequence	ATTTGATACAATTCTTCTCTGAAACCAAAAGGGGGAGGTCAAAAATGCAGACTTTATCAA TAGCTTTCTGCAACAGTGCCCTAGTGATAAGAAGAAGAAACTCTATCGGAAACAGAAACA GAGTAAAGTTGAGTTTAATCTCGTCTTCTTCTCCGACTCTTGTTTGCCATTCAAAGTCTA AATCTCAAACCGATAGCTTGAGGGTGTTGGAATGGGACAAGCTCTGCGATGTTGTCGCTT CTTTTGCTCGTACTTCTTTAGGCCGAGAAGCTACAAAGAAAAAGCTTTGGTCTCTTGACC AGAGTTTCAGTGAAAGTTTGAAACTTTTAGATGAAACTGATGCCGCCATTAAAATGCTTG AACATGGTTCCTTCTGTCTTGACCTCTCCAGTATTCATATCTCCCTCGTTGAATCGGGAA TTCGTCATGCTAAGAGGAGGCTTTCTTTACGAGCAGACCAAGCACTTGAAGTTGCTTCTC TTCTTAGGTTCTTCGAAAATTTGCAGCTTGATTTGAAAGCTGCCATTAAGCAAGATGGAG ATTGGTACAAACGGTTTATGCCTTTATCTGAATTGATAGTGCACCCTGTGATTAATAGAT CATTTGTCAAGTTGGTTGAACAAGTTATAGATCCTGATGGTACAATCAAAGATTCCGCGA GTAGTGCCCTGAGACAATCACGTGAACGAGTGCAGACACTTGAAAGAAAGCTGCAGCAAC TGCTGGATGCTATCATAAGGAGCCAAAAGGATGACGAATCTGTCATGTTAGCGGCTGAAA TTGATGGAAGATGGTGTATACAAATGAGCTCAAATCAGCTAACTTCTGTTAATGGTCTTC TGCTTTCCAGTGGTTCAGGTGGAGGGACTGCGGCGGAGCCAATAGCTGCGGTGTCTATGA ATGATGACCTTCAAAGTGCGAGAGCATCAGTTGCAAAGGCTGAGGCAGAGATTCTTTCAA TGTTAACTGAAAAGATGCAAGATGGTCTTTGTCAAATCGAGGTGGTGTTGAGCTACTCGA TTCAGCTGGATGTGATAAACGCTCGAGCAACTTACAGTCGTGCATATGGTGGTGCACATC CTGATATATACTTGCCACCTGAAGATGAGGTTGAATCTTTGTCTGCTGGAGAAAACTCGC CGGATATTAACTTACCGAGTGAGAAACCGCTTTCTAAAAAAGAATGGTTGCTGTATCTAC CTAGATGTTATCATCCTCTATTGCTTTACCAACACAAGAAAGGCATAAGAAAGACGCGGG AGACGGTAAAATTTCATAAAACAGCAGACACTGTATTATCAGGAGCTCCACCAATTCCGG CTGATTTCCAGATCTCTAAGGGCACTAGAGTTTTGGTTATTACCGGTCCAAACACAGGAG GTAAAACCATTTGCTTGAAATCAGTTGGGCTCGCTGCGATGATGGCAAAATCGGGTCTTT ATGTTCTAGCAACTGAATCTGCACGCATACCTTGGTTTGACAATATTTATGCTGATATTG GTGATGAACAATCTTTGCTGCAGTCACTTTCTACCTTTTCTGGTCATTTGAAACAAATAA GTGAAATTCTCTCGCATTCAACGAGCAGATCACTTGTGTTGTTAGATGAAGTTGGAGCTG GAACAAATCCCCTTGAAGGAGCTGCATTAGGGATGGCAATTCTCGAATCTTTTGCAGAAA GCGGTTCTTTACTCACGATGGCAACCACACATCATGGAGAGCTTAAGACGCTTAAATACA GCAATTCCGCCTTTGAGAATGCTTGCATGGAGTTTGATGACCTGAACCTAAAACCCACTT ACAAAATTCTATGGGGAGTACCAGGTCGGTCGAATGCAATAAACATAGCCGATAGGTTGG GGCTTCCATGTGATATCATCGAAAGTGCTCGTGAACTCTATGGCTCTGCAAGTGCTGAGA TCAATGAGGTCATACTTGACATGGAACGGTACAAGCAAGAATATCAGAGACTTTTGAATG AGTCACGTGTTTATATAAGGCTCTCAAGAGAGCTTCATGAGAATCTACTCACAGCACAAA AGAACATTAACGATCATTCCACCAAAGAGAGACGAAAAATGAGACAAGAACTAACTCAGG CTGGTTCGATGACTCGTTCTACACTTCGCAGAACATTGCAACAGTTTCGCTCATCTGCTG GAAAATCTTCTCAGTCAAAGGTAGCTACGCAACTCCAAACAAAAGTCAAAACGACGAAGG ATGAAGATAATGGAATTCGTTCATCATCTGTGGTAGAGAGACGACCACTTCCTGAAGCTG CGGCTCAAAAGGTTCCTGAAGTCGGTAGCTCGGTGTTTGTTTCTTCTCTTGGTAAAAAAG CGACCGTTTTGAAGGTAGAACATTCGAAGAAAGAGATCTTAGTGCAAGTAGGCATCATGA AGATGAAAGTGAAACTGACTGATGTTGTGGCCTGAATCTAAATGGCACAGTTATATTCAT TAGTATCTAAACCAACACCGTTATATTAGCTTCAGAGTACAAATAGTGTATTTAAAGTGA CATGAAGAAACATTACCTACTTATTATTACATATGTACTTGTTATATGCTTCTTTCTTAT ACAAGTATATGGTG