Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G54040.1
CDS Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr5:21928847-21930637 REVERSE LENGTH=1791 \| 201606
Sequence	ATGACTCCTGATGATTTCCAACTAGCCACCATGCCTAAACTCACGGTTCCTTTTCATGAT CATCCTATGTCAAGTTCTTATTGTATTTTTTTGGAATCTTGCTCTTTGTGCTCTTTCTCT AAGAACTCTTCATGGCTAAGAAGAAGTGTTACTTGTATCAGTTACGAGTGTACGGATTGT GGCTTGACGTTGCACAAAGAATGCGTTGACCACCTCTTCCTCAACCGGCCATTTCTATGC AATCACGTTCTCAAGATCTACCGTAATACCTTCGCGTGGCCTGACCCTGACCGTAAAGAC GACCTTTCTTGTCATTTTTGTCGACGTAAGCTTACGTCTTTCTTTGCTCGGCTACGTAAT CTTCCGTCTTTCTTTGCTCGTTGCACGATATGCAACATAAACGTGGATAAAAAATGTTTA ATGGCATTGGGACCACCACTCGCAATTTTCGAACCAAAACACCACGAGCATAGTCTCACC CTCTTGTTAAGGTTAGTCACCTTTACTTGTAATGCTTGTGGTGTGGTAGATGACCGCAAT CCTTACGTATGTCTTGAATGCAATTTGATGGTCCACAAAGAGTGTGTTCAGAATCTACCG CGAGTCATAAGCATAAATCGTCATGACCATCGCATATCTCATACTTTTCACCTTGGTCAA GGAGAAGGAGATTGGGAGTGTGGAGTTTGTCGGAAGACGATCAATTGGGTCTATGGAGGT TATAAATGCTCTCGTTGTCCTAGTTATGCCGTTCATTCAAGATGTGCAACAAGATACGAA GTGTGGGATGGTTTAGAGCTCGAAGATGTGCCCGAAGAAGAAGAAGAAATCGAAGATCCA TTCAAGGTAATTAATGAAAAGGGAGATATCATTCATTTTAGTCATGAAGAGCATGTTCTC AGATTGGACGAGATTTATGTAACGGATGATGCTAACATGCGTTGTCGGTGTTGCGTTCTT GCTATCAACGGTGACCCATGCTACAGATGCGTTGAATGTGATTTCATCCTTCACAAAGCG TGTGCGAATCTTCCTCGAAAAATGCGACATTTATTGCATAAGCATAAACTCACTCTTTCA TCGACAGGTAACCGTTTTTTGAGATGTAAAGCTTGTGACATAAAAACTAATGGTTTCATT TACGAGTGTCTTCATGAAGGTTGCAAAAGTATTAGTTTTACGTACGATGTTCGGTGTAGT TCTGTATCGGAACCGTTTCACCATGATCTGCATCAACATCCCTTATATTTTACGTTGGAG AAAACCAATAAATGTCACGCTTGTAAAAGAAAAATAGATTGGAATCCCTTGAATTGTACG GTTTGTGATGATTACTCTTTATGCACGAGGTGCGCTGCTTTACCAAGAAAGGTAAAACAC AGATGTGATGATCATTATCTGTCACTATGTCAAGGTGTGGGAAGTGCAAGTGGTGACTTG TGGTGTGATATTTGTGAGACAAAGACAGACCCGAGTGTATTTTACTATACTTGTGATGAT TGTGGGCTAAGTCTCCATATTGATTGTGTACTTGGGGATTGCTATTATACCAAAGTCGGA TGCCCAGGTCCTAGGATGGAAGTACATCCTAACAATGGTGCTACTCGACCTATCTGCACC AAGTGTGAATTACGTTGCAAGTTCCCCTTCTTCATAAAGGGTACAGAAGAAGATCTTGGT ATTTGGTATTGTTCAAAAGATCTCTGCCCAAAGGAGTTTAATTTTGCAGTTTCACCTTAT AGATTCGCTCTCGACATCGGACTTCGGGACTGGGACTTGAGAGTCTTTTAA

Peptide Sequence

PEP ID	AT5G54040.1
PEP Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr5:21928847-21930637 REVERSE LENGTH=596 \| 201606
Sequence	MTPDDFQLATMPKLTVPFHDHPMSSSYCIFLESCSLCSFSKNSSWLRRSVTCISYECTDC GLTLHKECVDHLFLNRPFLCNHVLKIYRNTFAWPDPDRKDDLSCHFCRRKLTSFFARLRN LPSFFARCTICNINVDKKCLMALGPPLAIFEPKHHEHSLTLLLRLVTFTCNACGVVDDRN PYVCLECNLMVHKECVQNLPRVISINRHDHRISHTFHLGQGEGDWECGVCRKTINWVYGG YKCSRCPSYAVHSRCATRYEVWDGLELEDVPEEEEEIEDPFKVINEKGDIIHFSHEEHVL RLDEIYVTDDANMRCRCCVLAINGDPCYRCVECDFILHKACANLPRKMRHLLHKHKLTLS STGNRFLRCKACDIKTNGFIYECLHEGCKSISFTYDVRCSSVSEPFHHDLHQHPLYFTLE KTNKCHACKRKIDWNPLNCTVCDDYSLCTRCAALPRKVKHRCDDHYLSLCQGVGSASGDL WCDICETKTDPSVFYYTCDDCGLSLHIDCVLGDCYYTKVGCPGPRMEVHPNNGATRPICT KCELRCKFPFFIKGTEEDLGIWYCSKDLCPKEFNFAVSPYRFALDIGLRDWDLRVF

Transcript Sequence

Transcript ID	AT5G54040.1
Transcript Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr5:21928847-21930637 REVERSE LENGTH=1791 \| 201606
Sequence	ATGACTCCTGATGATTTCCAACTAGCCACCATGCCTAAACTCACGGTTCCTTTTCATGAT CATCCTATGTCAAGTTCTTATTGTATTTTTTTGGAATCTTGCTCTTTGTGCTCTTTCTCT AAGAACTCTTCATGGCTAAGAAGAAGTGTTACTTGTATCAGTTACGAGTGTACGGATTGT GGCTTGACGTTGCACAAAGAATGCGTTGACCACCTCTTCCTCAACCGGCCATTTCTATGC AATCACGTTCTCAAGATCTACCGTAATACCTTCGCGTGGCCTGACCCTGACCGTAAAGAC GACCTTTCTTGTCATTTTTGTCGACGTAAGCTTACGTCTTTCTTTGCTCGGCTACGTAAT CTTCCGTCTTTCTTTGCTCGTTGCACGATATGCAACATAAACGTGGATAAAAAATGTTTA ATGGCATTGGGACCACCACTCGCAATTTTCGAACCAAAACACCACGAGCATAGTCTCACC CTCTTGTTAAGGTTAGTCACCTTTACTTGTAATGCTTGTGGTGTGGTAGATGACCGCAAT CCTTACGTATGTCTTGAATGCAATTTGATGGTCCACAAAGAGTGTGTTCAGAATCTACCG CGAGTCATAAGCATAAATCGTCATGACCATCGCATATCTCATACTTTTCACCTTGGTCAA GGAGAAGGAGATTGGGAGTGTGGAGTTTGTCGGAAGACGATCAATTGGGTCTATGGAGGT TATAAATGCTCTCGTTGTCCTAGTTATGCCGTTCATTCAAGATGTGCAACAAGATACGAA GTGTGGGATGGTTTAGAGCTCGAAGATGTGCCCGAAGAAGAAGAAGAAATCGAAGATCCA TTCAAGGTAATTAATGAAAAGGGAGATATCATTCATTTTAGTCATGAAGAGCATGTTCTC AGATTGGACGAGATTTATGTAACGGATGATGCTAACATGCGTTGTCGGTGTTGCGTTCTT GCTATCAACGGTGACCCATGCTACAGATGCGTTGAATGTGATTTCATCCTTCACAAAGCG TGTGCGAATCTTCCTCGAAAAATGCGACATTTATTGCATAAGCATAAACTCACTCTTTCA TCGACAGGTAACCGTTTTTTGAGATGTAAAGCTTGTGACATAAAAACTAATGGTTTCATT TACGAGTGTCTTCATGAAGGTTGCAAAAGTATTAGTTTTACGTACGATGTTCGGTGTAGT TCTGTATCGGAACCGTTTCACCATGATCTGCATCAACATCCCTTATATTTTACGTTGGAG AAAACCAATAAATGTCACGCTTGTAAAAGAAAAATAGATTGGAATCCCTTGAATTGTACG GTTTGTGATGATTACTCTTTATGCACGAGGTGCGCTGCTTTACCAAGAAAGGTAAAACAC AGATGTGATGATCATTATCTGTCACTATGTCAAGGTGTGGGAAGTGCAAGTGGTGACTTG TGGTGTGATATTTGTGAGACAAAGACAGACCCGAGTGTATTTTACTATACTTGTGATGAT TGTGGGCTAAGTCTCCATATTGATTGTGTACTTGGGGATTGCTATTATACCAAAGTCGGA TGCCCAGGTCCTAGGATGGAAGTACATCCTAACAATGGTGCTACTCGACCTATCTGCACC AAGTGTGAATTACGTTGCAAGTTCCCCTTCTTCATAAAGGGTACAGAAGAAGATCTTGGT ATTTGGTATTGTTCAAAAGATCTCTGCCCAAAGGAGTTTAATTTTGCAGTTTCACCTTAT AGATTCGCTCTCGACATCGGACTTCGGGACTGGGACTTGAGAGTCTTTTAA