Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G53170.1
CDS Infomation	\| FTSH protease 11 \| Chr5:21563023-21567922 REVERSE LENGTH=2421 \| 201606
Sequence	ATGTCTTCTTCTACTCTTCAAGCTTCTCTTTTTCTTCGTCCTCCTCTCCATACTTCTTCG TTTAAGCTTTACCCTTGTCTATTCTCTTCTTCTTCATTGAGTTTTTGTCCACAATCTCTC TCAAGTTTCTACCGTCTTTCTTCAGTTCTTCACAACTCTCGATTTCGTCCCCTTCCTTGC TCATTGCGTCAAGACAATGTCGCTTCCGATTCTGATTTCATTCCCAAAGACTCCGCTTTT GAGGTTACGGATTCAGCTGAGAGTAATAGATTGGTTTCCGATACGGAGGTTTCGGAATTA GAGACGAATGATAGATTTGTGGGTGGTGAGGAGACGAAAAGTGGAGGAGAAGAAGCGGAG GTTAGTAATGGAGTAACGGAAGGTAAGGAGGAAGATCAGAAGAAGAGCAAGTTTAGGATT GTGGTGTTGATGATGGCACTATGGGCGGCTATAAAGAGAGCTATAGAGAAGGTAATGGAG TGGGAATGGTTAAGCTGGTGGCCTTTCTCTCGCCAGGAGAAGCGGCTCGAGAAACTTATT GCTGAGGCTGATGCTAATCCAAAGGACGCAGCTTTGCAGGGTGCTTTATTGGCTGAGCTC AATAAGCATATTCCTGAGGCTGTAGTTCAACGGTTTGAACAAAGGGAACACACAGTGGAT AGTAGAGGAGTTGCTGAATATATTCGAGCTCTTGTCATTACAAATGCTATCTCGGAGTAT CTTCCTGATGAACAAACGGGGAAGCCATCTAGTCTTCCCGCACTGCTGCAAGAGCTGAAG CATCGTGCATCAGGCAATATGGACGAATCATTTGTGAACCCTGGTATATCTGAGAAGCAA CCACTGCATGTTACCATGGTTAATCCTAAAGTTTCAAACAAATCAAGATTTGCGCAAGAG CTTGTCTCTACGATCTTGTTCACTGTTGCGGTGGGATTAGTGTGGATTATGGGTGCAGCT GCTCTGCAAAAGTATATTGGAAGTCTTGGAGGAATTGGAACTTCGGGTGTTGGTTCAAGC TCTTCATATTCCCCAAAAGAGCTGAACAAAGAAATAACGCCAGAAAAGAATGTCAAAACA TTTAAGGACGTAAAGGGTTGTGATGATGCAAAACAAGAGCTCGAAGAGGTAGTTGAATAT CTCAAAAATCCATCAAAGTTTACCCGCCTTGGAGGAAAGTTGCCAAAGGGAATTCTTCTA ACCGGGGCACCTGGTACTGGAAAGACATTGCTGGCCAAAGCAATTGCTGGAGAAGCTGGA GTACCCTTCTTCTATAGAGCTGGATCTGAATTTGAAGAGATGTTTGTTGGGGTAGGAGCT CGCCGTGTGAGATCCTTGTTTCAGGCAGCCAAGAAGAAGGCACCTTGTATTATTTTCATT GACGAAATTGATGCTGTTGGATCCACAAGAAAACAATGGGAAGGGCATACAAAGAAGACA TTGCATCAACTACTTGTTGAAATGGATGGTTTTGAGCAGAATGAGGGAATAATAGTTATG GCTGCAACAAACTTGCCTGATATACTTGATCCAGCTCTGACAAGACCGGGTAGATTTGAT AGACATATTGTCGTACCCAGTCCGGATGTCCGTGGACGCGAAGAGATTTTGGAACTCTAC CTCCAAGGCAAACCTATGTCAGAAGATGTTGATGTTAAAGCAATTGCTCGTGGAACTCCT GGATTCAATGGTGCTGATCTTGCAAACCTGGTAAATATTGCTGCCATAAAAGCAGCTGTT GAAGGTGCTGAGAAGTTATCTTCTGAACAGTTGGAATTCGCAAAGGACCGAATTGTCATG GGCACAGAGAGGAAGACAATGTTCGTATCAGAGGACTCAAAAAAGCTCACTGCATACCAT GAGAGTGGTCATGCTATTGTCGCTTTAAATACGAAAGGTGCGCACCCGATCCACAAAGCG ACTATAATGCCACGTGGATCTGCATTGGGAATGGTTACACAGTTACCTTCAAACGATGAA ACATCAGTGAGCAAGAGGCAGTTATTAGCTCGTCTCGATGTATGTATGGGAGGAAGAGTT GCAGAGGAGCTCATCTTTGGCTTGGACCATATTACCACTGGAGCGAGTAGCGATCTGTCA CAGGCCACTGAACTTGCACAATACATGGTATCGAGTTGTGGGATGAGTGAGGCAATAGGA CCAGTTCATATAAAAGAAAGACCAAGCTCTGATATGCAATCACGCATTGATGCCGAGGTT GTGAAGCTTCTTAGAGAAGCATATGAGAGAGTGAAATCTCTCTTGAAACGGCATGAGAAG CAGCTACACACGTTAGCAAACGCACTTCTAGAGTATGAAACGCTAACCGCAGAGGACATA AAGCGTATTCTCCTTCCAAAGCAGGAAGGCGAGAAATTTGAAGAGCAACAACAAGAAGAA GGAGACTTGGTATTGGCCTAA

Peptide Sequence

PEP ID	AT5G53170.1
PEP Infomation	\| FTSH protease 11 \| Chr5:21563023-21567922 REVERSE LENGTH=806 \| 201606
Sequence	MSSSTLQASLFLRPPLHTSSFKLYPCLFSSSSLSFCPQSLSSFYRLSSVLHNSRFRPLPC SLRQDNVASDSDFIPKDSAFEVTDSAESNRLVSDTEVSELETNDRFVGGEETKSGGEEAE VSNGVTEGKEEDQKKSKFRIVVLMMALWAAIKRAIEKVMEWEWLSWWPFSRQEKRLEKLI AEADANPKDAALQGALLAELNKHIPEAVVQRFEQREHTVDSRGVAEYIRALVITNAISEY LPDEQTGKPSSLPALLQELKHRASGNMDESFVNPGISEKQPLHVTMVNPKVSNKSRFAQE LVSTILFTVAVGLVWIMGAAALQKYIGSLGGIGTSGVGSSSSYSPKELNKEITPEKNVKT FKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKT LHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELY LQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLEFAKDRIVM GTERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGSALGMVTQLPSNDE TSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQYMVSSCGMSEAIG PVHIKERPSSDMQSRIDAEVVKLLREAYERVKSLLKRHEKQLHTLANALLEYETLTAEDI KRILLPKQEGEKFEEQQQEEGDLVLA

Transcript Sequence

Transcript ID	AT5G53170.1
Transcript Infomation	\| FTSH protease 11 \| Chr5:21562718-21568023 REVERSE LENGTH=2827 \| 201606
Sequence	CCCGAGTCTCCAAGTAAAGTCTTCTCTTTTGCTCTGAAATAAAAAGAGTAAGAGAAGAAG GAAGAAGAAGATAAAGGATTCAAAAAACCCTAAACACTCCAATGTCTTCTTCTACTCTTC AAGCTTCTCTTTTTCTTCGTCCTCCTCTCCATACTTCTTCGTTTAAGCTTTACCCTTGTC TATTCTCTTCTTCTTCATTGAGTTTTTGTCCACAATCTCTCTCAAGTTTCTACCGTCTTT CTTCAGTTCTTCACAACTCTCGATTTCGTCCCCTTCCTTGCTCATTGCGTCAAGACAATG TCGCTTCCGATTCTGATTTCATTCCCAAAGACTCCGCTTTTGAGGTTACGGATTCAGCTG AGAGTAATAGATTGGTTTCCGATACGGAGGTTTCGGAATTAGAGACGAATGATAGATTTG TGGGTGGTGAGGAGACGAAAAGTGGAGGAGAAGAAGCGGAGGTTAGTAATGGAGTAACGG AAGGTAAGGAGGAAGATCAGAAGAAGAGCAAGTTTAGGATTGTGGTGTTGATGATGGCAC TATGGGCGGCTATAAAGAGAGCTATAGAGAAGGTAATGGAGTGGGAATGGTTAAGCTGGT GGCCTTTCTCTCGCCAGGAGAAGCGGCTCGAGAAACTTATTGCTGAGGCTGATGCTAATC CAAAGGACGCAGCTTTGCAGGGTGCTTTATTGGCTGAGCTCAATAAGCATATTCCTGAGG CTGTAGTTCAACGGTTTGAACAAAGGGAACACACAGTGGATAGTAGAGGAGTTGCTGAAT ATATTCGAGCTCTTGTCATTACAAATGCTATCTCGGAGTATCTTCCTGATGAACAAACGG GGAAGCCATCTAGTCTTCCCGCACTGCTGCAAGAGCTGAAGCATCGTGCATCAGGCAATA TGGACGAATCATTTGTGAACCCTGGTATATCTGAGAAGCAACCACTGCATGTTACCATGG TTAATCCTAAAGTTTCAAACAAATCAAGATTTGCGCAAGAGCTTGTCTCTACGATCTTGT TCACTGTTGCGGTGGGATTAGTGTGGATTATGGGTGCAGCTGCTCTGCAAAAGTATATTG GAAGTCTTGGAGGAATTGGAACTTCGGGTGTTGGTTCAAGCTCTTCATATTCCCCAAAAG AGCTGAACAAAGAAATAACGCCAGAAAAGAATGTCAAAACATTTAAGGACGTAAAGGGTT GTGATGATGCAAAACAAGAGCTCGAAGAGGTAGTTGAATATCTCAAAAATCCATCAAAGT TTACCCGCCTTGGAGGAAAGTTGCCAAAGGGAATTCTTCTAACCGGGGCACCTGGTACTG GAAAGACATTGCTGGCCAAAGCAATTGCTGGAGAAGCTGGAGTACCCTTCTTCTATAGAG CTGGATCTGAATTTGAAGAGATGTTTGTTGGGGTAGGAGCTCGCCGTGTGAGATCCTTGT TTCAGGCAGCCAAGAAGAAGGCACCTTGTATTATTTTCATTGACGAAATTGATGCTGTTG GATCCACAAGAAAACAATGGGAAGGGCATACAAAGAAGACATTGCATCAACTACTTGTTG AAATGGATGGTTTTGAGCAGAATGAGGGAATAATAGTTATGGCTGCAACAAACTTGCCTG ATATACTTGATCCAGCTCTGACAAGACCGGGTAGATTTGATAGACATATTGTCGTACCCA GTCCGGATGTCCGTGGACGCGAAGAGATTTTGGAACTCTACCTCCAAGGCAAACCTATGT CAGAAGATGTTGATGTTAAAGCAATTGCTCGTGGAACTCCTGGATTCAATGGTGCTGATC TTGCAAACCTGGTAAATATTGCTGCCATAAAAGCAGCTGTTGAAGGTGCTGAGAAGTTAT CTTCTGAACAGTTGGAATTCGCAAAGGACCGAATTGTCATGGGCACAGAGAGGAAGACAA TGTTCGTATCAGAGGACTCAAAAAAGCTCACTGCATACCATGAGAGTGGTCATGCTATTG TCGCTTTAAATACGAAAGGTGCGCACCCGATCCACAAAGCGACTATAATGCCACGTGGAT CTGCATTGGGAATGGTTACACAGTTACCTTCAAACGATGAAACATCAGTGAGCAAGAGGC AGTTATTAGCTCGTCTCGATGTATGTATGGGAGGAAGAGTTGCAGAGGAGCTCATCTTTG GCTTGGACCATATTACCACTGGAGCGAGTAGCGATCTGTCACAGGCCACTGAACTTGCAC AATACATGGTATCGAGTTGTGGGATGAGTGAGGCAATAGGACCAGTTCATATAAAAGAAA GACCAAGCTCTGATATGCAATCACGCATTGATGCCGAGGTTGTGAAGCTTCTTAGAGAAG CATATGAGAGAGTGAAATCTCTCTTGAAACGGCATGAGAAGCAGCTACACACGTTAGCAA ACGCACTTCTAGAGTATGAAACGCTAACCGCAGAGGACATAAAGCGTATTCTCCTTCCAA AGCAGGAAGGCGAGAAATTTGAAGAGCAACAACAAGAAGAAGGAGACTTGGTATTGGCCT AATCACATCATTCATTACCATAAACACACTTCTTTGGGTGAAAAAGGGAGATTCAAAGCT TTGTACAGAGTAAATCTCCCATAGCTTCTACAACAACAACCAAAAGAAAAACATATGAAA TTATTGATCTCATGTTACAAAATTATTGTAGTTTTTATTTCATTAGCTCATTAGTTTTCG CTTCGACCTTGAACCTTTTGCCCTTTTTGACATTCTGTTCAATTCTATGAAGAAAAATGT AAAACAACATTGAAAAGAAAGTAATAATTGTTGTCTTTATTCTCTGATGTGATTTTGAAA GCCAATG