Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G53130.1
CDS Infomation	\| cyclic nucleotide gated channel 1 \| Chr5:21537830-21540490 REVERSE LENGTH=2151 \| 201606
Sequence	ATGAATTTCCGACAAGAGAAGTTTGTAAGGTTTCAAGATTGGAAGTCGGATAAGACTTCC TCCGACGTGGAATATTCCGGTAAAAACGAGATTCAAACTGGAATATTCCAGAGAACAATA AGCTCAATCTCCGACAAGTTTTACAGAAGCTTTGAATCAAGCTCTGCAAGGATCAAACTA TTCAAAAGATCTTACAAGTCTTACTCTTTTAAAGAAGCTGTTTCAAAAGGGATTGGTTCT ACTCACAAAATTCTTGACCCACAAGGACCTTTTCTTCAGAGATGGAACAAGATCTTTGTT TTAGCTTGTATCATCGCTGTCTCGCTTGACCCTTTGTTCTTCTACGTGCCTATCATCGAT GATGCTAAGAAATGTCTTGGTATTGACAAGAAAATGGAAATAACAGCAAGCGTTTTGCGC TCTTTCACTGATGTTTTTTATGTCCTTCACATCATTTTCCAGTTCCGTACTGGCTTTATC GCTCCTTCGTCTCGTGTTTTTGGGAGAGGTGTTCTTGTTGAGGACAAGCGAGAGATCGCT AAACGTTACTTGTCCTCACATTTCATAATTGACATTCTTGCTGTTCTTCCGCTTCCGCAG ATGGTGATTTTGATAATCATTCCACATATGAGAGGTTCATCGTCTTTGAACACGAAGAAT ATGTTGAAGTTTATTGTTTTCTTCCAATATATACCGAGGTTTATAAGAATATATCCGCTC TACAAGGAAGTTACAAGAACTTCAGGCATACTCACTGAGACAGCTTGGGCTGGAGCTGCT TTCAATCTCTTCCTCTACATGCTTGCTAGTCATGTGTTTGGTGCTTTCTGGTATTTGTTC TCAATCGAACGCGAAACGGTGTGCTGGAAACAAGCTTGTGAGAGGAATAACCCTCCGTGC ATTTCGAAGTTGTTGTACTGTGACCCTGAAACTGCAGGAGGCAATGCTTTCCTCAATGAG TCTTGTCCGATTCAGACACCAAACACAACACTCTTCGACTTTGGGATATTCCTTGACGCA CTTCAATCCGGTGTAGTGGAATCTCAAGATTTCCCTCAAAAGTTTTTTTACTGTTTCTGG TGGGGTCTGCAGAACCTCAGTTCGCTCGGTCAGAACCTTAAAACAAGTACATATATTTGG GAAATCTGTTTCGCGGTGTTCATTTCTATTGCGGGGCTGGTTTTGTTCTCCTTCTTGATT GGAAATATGCAGACGTATCTGCAATCCACTACCACGAGATTGGAGGAGATGAGGGTAAAG AGAAGAGACGCAGAACAATGGATGTCACACCGTTTGCTACCTGAGAACTTGAGAAAAAGA ATCCGGCGATACGAGCAGTACAAATGGCAAGAGACAAGAGGTGTTGACGAAGAGAATCTT CTTAGTAATCTTCCCAAAGATCTTAGACGCGACATCAAACGTCATCTCTGTCTCGCCCTT CTCATGCGGGTCCCCATGTTTGAGAAAATGGACGAACAGCTTCTTGATGCGCTCTGTGAC CGTTTGCAACCTGTGTTATACACAGAGGAAAGCTACATAGTAAGAGAAGGAGATCCGGTA GACGAAATGCTCTTCATAATGCGCGGGAAGCTTCTAACAATCACAACAAACGGTGGAAGA ACCGGTTTTTTAAATTCCGAGTATCTTGGAGCCGGTGATTTCTGTGGTGAGGAGCTTTTA ACCTGGGCTTTAGACCCACACTCATCCTCAAACCTCCCAATCTCAACAAGAACTGTTCGA GCTCTCATGGAAGTTGAAGCTTTCGCACTTAAAGCTGATGACCTCAAATTCGTGGCTTCC CAGTTCAGACGTCTTCACAGCAAACAGCTAAGACATACTTTCAGGTACTACTCACAACAA TGGAAGACTTGGGCCGCTTGCTTCATACAAGCCGCTTGGAGAAGATACATTAAGAAGAAA CTCGAAGAGTCTCTTAAAGAAGAAGAGAATCGGTTGCAGGATGCTTTGGCTAAAGAAGCT TGTGGAAGTTCCCCAAGCCTCGGTGCTACAATATACGCATCACGGTTTGCTGCAAATATC TTGCGCACAATACGTAGGAGCGGATCAGTAAGGAAACCAAGGATGCCGGAACGAATGCCA CCTATGCTACTTCAGAAACCAGCAGAGCCAGATTTCAACAGTGATGATTAA

Peptide Sequence

PEP ID	AT5G53130.1
PEP Infomation	\| cyclic nucleotide gated channel 1 \| Chr5:21537830-21540490 REVERSE LENGTH=716 \| 201606
Sequence	MNFRQEKFVRFQDWKSDKTSSDVEYSGKNEIQTGIFQRTISSISDKFYRSFESSSARIKL FKRSYKSYSFKEAVSKGIGSTHKILDPQGPFLQRWNKIFVLACIIAVSLDPLFFYVPIID DAKKCLGIDKKMEITASVLRSFTDVFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDKREIA KRYLSSHFIIDILAVLPLPQMVILIIIPHMRGSSSLNTKNMLKFIVFFQYIPRFIRIYPL YKEVTRTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACERNNPPC ISKLLYCDPETAGGNAFLNESCPIQTPNTTLFDFGIFLDALQSGVVESQDFPQKFFYCFW WGLQNLSSLGQNLKTSTYIWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVK RRDAEQWMSHRLLPENLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLAL LMRVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGR TGFLNSEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFVAS QFRRLHSKQLRHTFRYYSQQWKTWAACFIQAAWRRYIKKKLEESLKEEENRLQDALAKEA CGSSPSLGATIYASRFAANILRTIRRSGSVRKPRMPERMPPMLLQKPAEPDFNSDD

Transcript Sequence

Transcript ID	AT5G53130.1
Transcript Infomation	\| cyclic nucleotide gated channel 1 \| Chr5:21537721-21541029 REVERSE LENGTH=2653 \| 201606
Sequence	GGAAACTCCTTCCCCGTCCTCTCTGTCCTCTGATAAAGGCTTCACTTTCATCATTCAATC TCTTCTTCTTCTTTCTTCTTCATCACTCTCTCTCTTTCTCCAATTTCTTCATTTTATCAG CTTCCTCTCTTCTTTAGTTTCTGGGTCACTTTAGTTTCGCTCTTTCCGAGGAAAAACAAA ACAAAGATTTGATTTTTCTTTTTGGTGGGTTTAAACAGTGATTTCTTCTTTTGCCCTTTT ATTGGTTCTTATTGTTCTCCTCAAAAGTCTACAGGATTGTCGGAAGCAAACACACTTGTC CATGTTCGGGTTATGAATTTCCCTCTAATTGGTGAAGAAGACACATGAAGCAGTGAAATC TCTGTTTGTATTGAATCTTATTAGTCTCAAACTATGAATTTCCGACAAGAGAAGTTTGTA AGGTTTCAAGATTGGAAGTCGGATAAGACTTCCTCCGACGTGGAATATTCCGGTAAAAAC GAGATTCAAACTGGAATATTCCAGAGAACAATAAGCTCAATCTCCGACAAGTTTTACAGA AGCTTTGAATCAAGCTCTGCAAGGATCAAACTATTCAAAAGATCTTACAAGTCTTACTCT TTTAAAGAAGCTGTTTCAAAAGGGATTGGTTCTACTCACAAAATTCTTGACCCACAAGGA CCTTTTCTTCAGAGATGGAACAAGATCTTTGTTTTAGCTTGTATCATCGCTGTCTCGCTT GACCCTTTGTTCTTCTACGTGCCTATCATCGATGATGCTAAGAAATGTCTTGGTATTGAC AAGAAAATGGAAATAACAGCAAGCGTTTTGCGCTCTTTCACTGATGTTTTTTATGTCCTT CACATCATTTTCCAGTTCCGTACTGGCTTTATCGCTCCTTCGTCTCGTGTTTTTGGGAGA GGTGTTCTTGTTGAGGACAAGCGAGAGATCGCTAAACGTTACTTGTCCTCACATTTCATA ATTGACATTCTTGCTGTTCTTCCGCTTCCGCAGATGGTGATTTTGATAATCATTCCACAT ATGAGAGGTTCATCGTCTTTGAACACGAAGAATATGTTGAAGTTTATTGTTTTCTTCCAA TATATACCGAGGTTTATAAGAATATATCCGCTCTACAAGGAAGTTACAAGAACTTCAGGC ATACTCACTGAGACAGCTTGGGCTGGAGCTGCTTTCAATCTCTTCCTCTACATGCTTGCT AGTCATGTGTTTGGTGCTTTCTGGTATTTGTTCTCAATCGAACGCGAAACGGTGTGCTGG AAACAAGCTTGTGAGAGGAATAACCCTCCGTGCATTTCGAAGTTGTTGTACTGTGACCCT GAAACTGCAGGAGGCAATGCTTTCCTCAATGAGTCTTGTCCGATTCAGACACCAAACACA ACACTCTTCGACTTTGGGATATTCCTTGACGCACTTCAATCCGGTGTAGTGGAATCTCAA GATTTCCCTCAAAAGTTTTTTTACTGTTTCTGGTGGGGTCTGCAGAACCTCAGTTCGCTC GGTCAGAACCTTAAAACAAGTACATATATTTGGGAAATCTGTTTCGCGGTGTTCATTTCT ATTGCGGGGCTGGTTTTGTTCTCCTTCTTGATTGGAAATATGCAGACGTATCTGCAATCC ACTACCACGAGATTGGAGGAGATGAGGGTAAAGAGAAGAGACGCAGAACAATGGATGTCA CACCGTTTGCTACCTGAGAACTTGAGAAAAAGAATCCGGCGATACGAGCAGTACAAATGG CAAGAGACAAGAGGTGTTGACGAAGAGAATCTTCTTAGTAATCTTCCCAAAGATCTTAGA CGCGACATCAAACGTCATCTCTGTCTCGCCCTTCTCATGCGGGTCCCCATGTTTGAGAAA ATGGACGAACAGCTTCTTGATGCGCTCTGTGACCGTTTGCAACCTGTGTTATACACAGAG GAAAGCTACATAGTAAGAGAAGGAGATCCGGTAGACGAAATGCTCTTCATAATGCGCGGG AAGCTTCTAACAATCACAACAAACGGTGGAAGAACCGGTTTTTTAAATTCCGAGTATCTT GGAGCCGGTGATTTCTGTGGTGAGGAGCTTTTAACCTGGGCTTTAGACCCACACTCATCC TCAAACCTCCCAATCTCAACAAGAACTGTTCGAGCTCTCATGGAAGTTGAAGCTTTCGCA CTTAAAGCTGATGACCTCAAATTCGTGGCTTCCCAGTTCAGACGTCTTCACAGCAAACAG CTAAGACATACTTTCAGGTACTACTCACAACAATGGAAGACTTGGGCCGCTTGCTTCATA CAAGCCGCTTGGAGAAGATACATTAAGAAGAAACTCGAAGAGTCTCTTAAAGAAGAAGAG AATCGGTTGCAGGATGCTTTGGCTAAAGAAGCTTGTGGAAGTTCCCCAAGCCTCGGTGCT ACAATATACGCATCACGGTTTGCTGCAAATATCTTGCGCACAATACGTAGGAGCGGATCA GTAAGGAAACCAAGGATGCCGGAACGAATGCCACCTATGCTACTTCAGAAACCAGCAGAG CCAGATTTCAACAGTGATGATTAATTAATTAGCATATATGTATATGAAAGATTTTATTGC GAACCATAGAGCCAATATATAAATATAAGTCTTTTTATAAAGGAGTAAACTTAGAGATAC AAAGCCTTCAATG