Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT5G52970.1
CDS Infomation

| thylakoid lumen 15.0 kDa protein | Chr5:21479620-21481018 FORWARD LENGTH=672 | 201606
Sequence

ATGGCGATGCTTTTTCGACCTCCTCCTTCACAATGTAGAAGCTTCTCTCCTTTTGTCTTC
AACTACAGCTCCAGAGAAGTTTCTTCGTCGTCTCGTCTCTCCTTGAAAACCTCCGGCGAC
GAAGAAAACTGGGTTTCACGTTTCCGGTCGAAATCTCTCAGTTTGGTGTTCTCTGGAGCT
CTTGCTCTCGGTTTATCTCTATCAGGCGTGGGGTTTGCAGATGCAAAAGTTGGTGTTAAC
AAACCAGAATTGCTTCCTAAAGAGTTCACTTCTGTTATAGATGTTGCTGATTTCCTCTCT
AATGGTCAGGAGAAGAGAATTGCTCAAGAAATCGCTAATCTTGAGAAAGATACAGGATTC
AAGTTGAGAGTCTTGGCTCAAAACTATCCCGTTACCCCTGGACTAGCAATCAAAGATTTC
TGGCAGGTGGATGATAGCACAATTGTGTTTGTCGCTGACCCGACTTTTGGGAACATATTG
AATTTCAATGTTGGAGCTACGGTTGATTTAGACATACCTCGTAGTTTCTGGAGTCGACTG
GCTGGGAAATACGGCAATATGTTTTACTGGAAAGAGAAGGGAGAAGATGCATCTATTGAA
GCTGCAGTGATGGCGATATCAAGTTGCTTACGAGAACCAGTTGGTCGAAACAACTGTGCA
GAGATCCAATGA

Peptide Sequence

PEP ID

AT5G52970.1
PEP Infomation

| thylakoid lumen 15.0 kDa protein | Chr5:21479620-21481018 FORWARD LENGTH=223 | 201606
Sequence

MAMLFRPPPSQCRSFSPFVFNYSSREVSSSSRLSLKTSGDEENWVSRFRSKSLSLVFSGA
LALGLSLSGVGFADAKVGVNKPELLPKEFTSVIDVADFLSNGQEKRIAQEIANLEKDTGF
KLRVLAQNYPVTPGLAIKDFWQVDDSTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRL
AGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGRNNCAEIQ

Transcript Sequence

Transcript ID

AT5G52970.1
Transcript Infomation

| thylakoid lumen 15.0 kDa protein | Chr5:21479382-21481256 FORWARD LENGTH=1122 | 201606
Sequence

AATGTGTTTTGTTGGTTGCACAAAAGAAAAACATTGGAACCGACCAAAAAAAAAAACATT
GGAAAATCGTACCTCAAAATGCAATAACCAAACAAACCTTCTCATATGGATCCTATAGTA
TGGTTATTTCCGGTTTAGTTGGTTCGGTTCTGTACCGAAATTATATCGAGCGTTTTAACG
TTATCCAGAACGAAGCAGAGTAACGAAGAGTCATGGCGATGCTTTTTCGACCTCCTCCTT
CACAATGTAGAAGCTTCTCTCCTTTTGTCTTCAACTACAGCTCCAGAGAAGTTTCTTCGT
CGTCTCGTCTCTCCTTGAAAACCTCCGGCGACGAAGAAAACTGGGTTTCACGTTTCCGGT
CGAAATCTCTCAGTTTGGTGTTCTCTGGAGCTCTTGCTCTCGGTTTATCTCTATCAGGCG
TGGGGTTTGCAGATGCAAAAGTTGGTGTTAACAAACCAGAATTGCTTCCTAAAGAGTTCA
CTTCTGTTATAGATGTTGCTGATTTCCTCTCTAATGGTCAGGAGAAGAGAATTGCTCAAG
AAATCGCTAATCTTGAGAAAGATACAGGATTCAAGTTGAGAGTCTTGGCTCAAAACTATC
CCGTTACCCCTGGACTAGCAATCAAAGATTTCTGGCAGGTGGATGATAGCACAATTGTGT
TTGTCGCTGACCCGACTTTTGGGAACATATTGAATTTCAATGTTGGAGCTACGGTTGATT
TAGACATACCTCGTAGTTTCTGGAGTCGACTGGCTGGGAAATACGGCAATATGTTTTACT
GGAAAGAGAAGGGAGAAGATGCATCTATTGAAGCTGCAGTGATGGCGATATCAAGTTGCT
TACGAGAACCAGTTGGTCGAAACAACTGTGCAGAGATCCAATGAAGTATATGACCCCATC
AAGCGTATATGTTATTATCATAATATCATTGTATAGATTGGCACCAAAGAGATACAGAAT
TTGTAAGAATGAATCCACGTCTAGTAGTAACCTCTCTCCATTTCTCAGCTTCACCTACTC
AAACAAACAGTTTCAATTGGTTACTTGTATCTTTTAAAACAAACAAATAGAGAAACCAAA
ATCAATAAACTGGAATAAGATATTTCAAATTGTAACAGCGAA