Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G52950.1
CDS Infomation	\| LIM domain protein \| Chr5:21473887-21476939 REVERSE LENGTH=2847 \| 201606
Sequence	ATGGCTGGAGATTTGTTATACGCCAAAACGCAGCGTTTTGTGCTTTTGATAGATCTTAAT CCGCTTCTGATCAAACCCAATTCGGAGCAATACCTAGCCGTCGTGATCTCCGCCGCCGAG AAGCTTCTCTTATTTCCTCCTTTATCTGCTTCTCTCTTCTCTTTCAAATTCTTCTTTTCT TCTCTTTCTTCTCTCTTATCATCCTCAAAGCTCTCGTCACTCTCAATTTCATCTTCTCCG CTTTCATTTGACCTTCCTAACCCTACACTCGTCTCTCTCAAACGCGCCATCGACGCGGTT AAAGGATATGAACTTCGATCTAGCTCCACGGTGGCGACGGCGGCATCGCCTCGTGGGGTT AATGTCGCGGCGAATTTGCGACAGATTGTTTATGATTACGCTTGGGAACCGGTGGTTCGA GATCCGGAGATAGGTATGATTCCTGGATTTACTGATGGTGGATTAGATGTTGTGAGGTCG AATTTGGTTGTGATGTTTTCCCCAATTTCTAGGGATTTGGATTGGGTTTCTGAGTTTCTT GATGTTAAGAGTGGTGATGAGTGTTTTAGCGACTTGGATTTGTTTAAGTCAAAGTTAAGG GAGATTTTTTATTGTGTGAATGAGTTATTTGATGATAGAGATATTCAATTAAGCTGGATT GATGTTAAATCTGGAGATGAAAGATGTGAATTGGGATTGAAGTCTGGGTTTTTCGATAGT GGGATTAGAGAATTGGGTTGGGGGCATTGTTCTACTGATTCAATTGTTTTTGGTTCTTCA GTTGTTCCCTTTGGATTAATATATCCAGCAATTGGTATTTCCCCAAAGCTATCTACTAGC CAGAAATTTACCCTTCAGGCTAGTCTTGAGATTGCAGATATTAATGGTAAACCTATGGAA TGCAAGTGTGGTGGTGAGTTAGAGTTTTCTTCTTCTGAAATATTTAGTGGGAAGAGGTGT GATGAGTTTATCAACTTAGCTAGTGGGACTGAGCCAGTCAATCATGACTCTCTAGTTGAA CAGTTTTGTGATGGGAGTACCAAACTCAGTATTAAGGCCTTGAGGATGTGTGATGATCTT ATTGAACTAGAGAGGTATACTTGCGATACTTTTGTTGTTCATCAAGTCTCCCAGGACTCT GATCAAGATCAGGAGGAGGAGAGTGCGTTTTGGGCTGACCTGGTTTTTCAGATATTAGGA AAGGAGACGGGTGAGAGAGTAGCCAAAAGATCATCACCCATTTGGCAGATCTTATTAAGT TATCTCTATAGGGAAGGTTTCTCAGCATTGGTATCTTTTTCAAATAGCAATGGTAGTTTG CGGACAGGAATCCTCAAGCCCTTCACTTTTTCCTCGGCCTTAATCTGTGTTTTTGACAAT GGAGTGTCTCCTCAAACTGTGGATCATGAAGATAGCAGGAAGAAAGTCAGTTGTAGCGAA TATAAAAGAAAACCAAGGAAAAATTCTCTTAATGACATTAGCTGGGAGGAGTTCTGCAGA TCAGTGAAAGATTATGGTCAAATAGATCTAGAAGATGTTTATTTCTTCAAGTATAGCAAG TCGAAGAAACTTAAGTTTCTGAAATGCTGGATGAAACAGATTAGTAAACCCAGAGGTTGC AGCTTATCCGTGGCTAGTAATTGCAATGCATTGGAGGATGTGGACGCAAATCCAATTGAG GAAAAGAACAACTCCTCTGAAGAGACAGATAAAGCTAGTTCTCCTTTACCTCTAGCTGAA GAGGACATTGCTTTGAGTGGAAATCGTATATCCGGAAAGCAGGAAAGTAATACGTATGTT CATGCATCAGAATCATCAGAGAATTTCTTCGTTAGTCTTCCTAGTAAAATCAAGCAAGGG ATAGAGTCTGAAGAAATAGACTTGTCAGCTCTTGCCGAGCGGCTTGTCAAGTCTTGTGTC TTCTACTCCTCTCAAAGAGCTGAGAAGGACTATAGCTGTGAGAGTGGAACCCTCTTGTTG GTCATTGACGAGCTAACCAAGATGTTACTGAAAGATCCGAAAGATTTAGTTGCCAAGTTC AAAAAGAAAGATTCATCATCAGTGGCTAGTGAGCGGAATTGTGATGAAGCTGGACCCAGT AGGATCGTTAGAGAATACGAGCTGCAGATTCTTTTCAGGATGGAGATTCTAAGATGTAAG AAAGGTTTGGGAAATGAAGAATCTGTGACACAGAAGTTTGCAAAACAGATTTGCATGTTC CTTGAGGGCATTCAGTGCAAGTTAGATGGCGGATTCTTTGGTGAATGGAGCCTTGATAAG TATGTAGACAAAACTATAAAAGCCAGGTATCAGCATATTCTGGGAGGAGCTGTCAATATA ATATATACAGAGATGGATCTGCTCATGTTCACTGATGAGGATCTTGAAGATAGTTTCATG AACAATGAAGACAGTAGTCAATCAGGGAGAGAAAATATCCATAGCAATTTCAAAAATCAT CATCATAGTCAAAGTAATGAAGATGTTCCTGGTACGAGTAAGCAGAAAAACACTGAGGAA AGCAGAGAAGCTAAGAAAGAGGTTGAAGCACAAGGAATGAGGGAGAGGGCAAGAAGATTC TCGAGTTTCACAAGTTGGATGCCTGATCTTTGTAGAGTCTGGGCACCAAAACAAACGAAG AACTCTAAAGGCAAGGCCGACCAGCAACAGAGAACGGCCAAAAGAAAGAAGGAGCAAAGA TCAGTGGAATATGATAGAGTATGTGAGACACCAATGACAACAATAGAGACCAAACGAATA CGAACTGGTAACAAAGATGACTACGAATGTGAGACTTTGCCTCGTAGTTCAGTACCAAAG GCTTTGTTTCAGGATGATTGTTCTTAG

Peptide Sequence

PEP ID	AT5G52950.1
PEP Infomation	\| LIM domain protein \| Chr5:21473887-21476939 REVERSE LENGTH=948 \| 201606
Sequence	MAGDLLYAKTQRFVLLIDLNPLLIKPNSEQYLAVVISAAEKLLLFPPLSASLFSFKFFFS SLSSLLSSSKLSSLSISSSPLSFDLPNPTLVSLKRAIDAVKGYELRSSSTVATAASPRGV NVAANLRQIVYDYAWEPVVRDPEIGMIPGFTDGGLDVVRSNLVVMFSPISRDLDWVSEFL DVKSGDECFSDLDLFKSKLREIFYCVNELFDDRDIQLSWIDVKSGDERCELGLKSGFFDS GIRELGWGHCSTDSIVFGSSVVPFGLIYPAIGISPKLSTSQKFTLQASLEIADINGKPME CKCGGELEFSSSEIFSGKRCDEFINLASGTEPVNHDSLVEQFCDGSTKLSIKALRMCDDL IELERYTCDTFVVHQVSQDSDQDQEEESAFWADLVFQILGKETGERVAKRSSPIWQILLS YLYREGFSALVSFSNSNGSLRTGILKPFTFSSALICVFDNGVSPQTVDHEDSRKKVSCSE YKRKPRKNSLNDISWEEFCRSVKDYGQIDLEDVYFFKYSKSKKLKFLKCWMKQISKPRGC SLSVASNCNALEDVDANPIEEKNNSSEETDKASSPLPLAEEDIALSGNRISGKQESNTYV HASESSENFFVSLPSKIKQGIESEEIDLSALAERLVKSCVFYSSQRAEKDYSCESGTLLL VIDELTKMLLKDPKDLVAKFKKKDSSSVASERNCDEAGPSRIVREYELQILFRMEILRCK KGLGNEESVTQKFAKQICMFLEGIQCKLDGGFFGEWSLDKYVDKTIKARYQHILGGAVNI IYTEMDLLMFTDEDLEDSFMNNEDSSQSGRENIHSNFKNHHHSQSNEDVPGTSKQKNTEE SREAKKEVEAQGMRERARRFSSFTSWMPDLCRVWAPKQTKNSKGKADQQQRTAKRKKEQR SVEYDRVCETPMTTIETKRIRTGNKDDYECETLPRSSVPKALFQDDCS

Transcript Sequence

Transcript ID	AT5G52950.1
Transcript Infomation	\| LIM domain protein \| Chr5:21473720-21477024 REVERSE LENGTH=3099 \| 201606
Sequence	AAAACATAACCTCGTAGCTCACTCCCTCCTCTCTTCTTCAACCTCAAAACCAAAATCGAA TCTTCTCTCTCTCTGCTTCATTTCAATGGCTGGAGATTTGTTATACGCCAAAACGCAGCG TTTTGTGCTTTTGATAGATCTTAATCCGCTTCTGATCAAACCCAATTCGGAGCAATACCT AGCCGTCGTGATCTCCGCCGCCGAGAAGCTTCTCTTATTTCCTCCTTTATCTGCTTCTCT CTTCTCTTTCAAATTCTTCTTTTCTTCTCTTTCTTCTCTCTTATCATCCTCAAAGCTCTC GTCACTCTCAATTTCATCTTCTCCGCTTTCATTTGACCTTCCTAACCCTACACTCGTCTC TCTCAAACGCGCCATCGACGCGGTTAAAGGATATGAACTTCGATCTAGCTCCACGGTGGC GACGGCGGCATCGCCTCGTGGGGTTAATGTCGCGGCGAATTTGCGACAGATTGTTTATGA TTACGCTTGGGAACCGGTGGTTCGAGATCCGGAGATAGGTATGATTCCTGGATTTACTGA TGGTGGATTAGATGTTGTGAGGTCGAATTTGGTTGTGATGTTTTCCCCAATTTCTAGGGA TTTGGATTGGGTTTCTGAGTTTCTTGATGTTAAGAGTGGTGATGAGTGTTTTAGCGACTT GGATTTGTTTAAGTCAAAGTTAAGGGAGATTTTTTATTGTGTGAATGAGTTATTTGATGA TAGAGATATTCAATTAAGCTGGATTGATGTTAAATCTGGAGATGAAAGATGTGAATTGGG ATTGAAGTCTGGGTTTTTCGATAGTGGGATTAGAGAATTGGGTTGGGGGCATTGTTCTAC TGATTCAATTGTTTTTGGTTCTTCAGTTGTTCCCTTTGGATTAATATATCCAGCAATTGG TATTTCCCCAAAGCTATCTACTAGCCAGAAATTTACCCTTCAGGCTAGTCTTGAGATTGC AGATATTAATGGTAAACCTATGGAATGCAAGTGTGGTGGTGAGTTAGAGTTTTCTTCTTC TGAAATATTTAGTGGGAAGAGGTGTGATGAGTTTATCAACTTAGCTAGTGGGACTGAGCC AGTCAATCATGACTCTCTAGTTGAACAGTTTTGTGATGGGAGTACCAAACTCAGTATTAA GGCCTTGAGGATGTGTGATGATCTTATTGAACTAGAGAGGTATACTTGCGATACTTTTGT TGTTCATCAAGTCTCCCAGGACTCTGATCAAGATCAGGAGGAGGAGAGTGCGTTTTGGGC TGACCTGGTTTTTCAGATATTAGGAAAGGAGACGGGTGAGAGAGTAGCCAAAAGATCATC ACCCATTTGGCAGATCTTATTAAGTTATCTCTATAGGGAAGGTTTCTCAGCATTGGTATC TTTTTCAAATAGCAATGGTAGTTTGCGGACAGGAATCCTCAAGCCCTTCACTTTTTCCTC GGCCTTAATCTGTGTTTTTGACAATGGAGTGTCTCCTCAAACTGTGGATCATGAAGATAG CAGGAAGAAAGTCAGTTGTAGCGAATATAAAAGAAAACCAAGGAAAAATTCTCTTAATGA CATTAGCTGGGAGGAGTTCTGCAGATCAGTGAAAGATTATGGTCAAATAGATCTAGAAGA TGTTTATTTCTTCAAGTATAGCAAGTCGAAGAAACTTAAGTTTCTGAAATGCTGGATGAA ACAGATTAGTAAACCCAGAGGTTGCAGCTTATCCGTGGCTAGTAATTGCAATGCATTGGA GGATGTGGACGCAAATCCAATTGAGGAAAAGAACAACTCCTCTGAAGAGACAGATAAAGC TAGTTCTCCTTTACCTCTAGCTGAAGAGGACATTGCTTTGAGTGGAAATCGTATATCCGG AAAGCAGGAAAGTAATACGTATGTTCATGCATCAGAATCATCAGAGAATTTCTTCGTTAG TCTTCCTAGTAAAATCAAGCAAGGGATAGAGTCTGAAGAAATAGACTTGTCAGCTCTTGC CGAGCGGCTTGTCAAGTCTTGTGTCTTCTACTCCTCTCAAAGAGCTGAGAAGGACTATAG CTGTGAGAGTGGAACCCTCTTGTTGGTCATTGACGAGCTAACCAAGATGTTACTGAAAGA TCCGAAAGATTTAGTTGCCAAGTTCAAAAAGAAAGATTCATCATCAGTGGCTAGTGAGCG GAATTGTGATGAAGCTGGACCCAGTAGGATCGTTAGAGAATACGAGCTGCAGATTCTTTT CAGGATGGAGATTCTAAGATGTAAGAAAGGTTTGGGAAATGAAGAATCTGTGACACAGAA GTTTGCAAAACAGATTTGCATGTTCCTTGAGGGCATTCAGTGCAAGTTAGATGGCGGATT CTTTGGTGAATGGAGCCTTGATAAGTATGTAGACAAAACTATAAAAGCCAGGTATCAGCA TATTCTGGGAGGAGCTGTCAATATAATATATACAGAGATGGATCTGCTCATGTTCACTGA TGAGGATCTTGAAGATAGTTTCATGAACAATGAAGACAGTAGTCAATCAGGGAGAGAAAA TATCCATAGCAATTTCAAAAATCATCATCATAGTCAAAGTAATGAAGATGTTCCTGGTAC GAGTAAGCAGAAAAACACTGAGGAAAGCAGAGAAGCTAAGAAAGAGGTTGAAGCACAAGG AATGAGGGAGAGGGCAAGAAGATTCTCGAGTTTCACAAGTTGGATGCCTGATCTTTGTAG AGTCTGGGCACCAAAACAAACGAAGAACTCTAAAGGCAAGGCCGACCAGCAACAGAGAAC GGCCAAAAGAAAGAAGGAGCAAAGATCAGTGGAATATGATAGAGTATGTGAGACACCAAT GACAACAATAGAGACCAAACGAATACGAACTGGTAACAAAGATGACTACGAATGTGAGAC TTTGCCTCGTAGTTCAGTACCAAAGGCTTTGTTTCAGGATGATTGTTCTTAGGTACACTT ACAAGTGAATGAAGCCTAAAAATGGGAAAAGAAAATGTATCATTAGAGTTTGAGTGGGAT GTTCTTTGTTAGAGTTAGTAATTCAAACCCTATACGTAGATGGAATCTCATTGTACTTTT TTACAAAATCAGATATTAATACAAGAATGAGTGAATCAA