Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G52850.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:21414935-21417616 REVERSE LENGTH=2682 \| 201606
Sequence	ATGACGAGCAAAGTAGTAGCAGCAGCAGCTTCTGCATTTCTCTCTCGCACTAACGAATTG GGTAATCTTCAAAAATCATGTATTCGGATTCTCTCCTTCTGCGAATCGAATTCATCACGT ATTGGTTTACACATCCACTGCCCAGTAATAAAGTTTGGTCTTTTAGAGAATCTCGACTTA TGCAACAATCTTTTGAGTCTTTACTTAAAAACCGATGGTATATGGAATGCACGTAAACTG TTCGATGAAATGTCTCACAGAACTGTTTTCGCATGGACAGTTATGATCTCTGCTTTTACC AAGAGCCAAGAGTTTGCATCAGCGCTTTCGTTGTTTGAGGAAATGATGGCTTCGGGAACA CACCCGAACGAATTCACTTTTTCCTCGGTGGTAAGATCTTGTGCTGGTTTAAGAGATATT AGTTACGGAGGTCGAGTTCATGGCTCTGTTATAAAGACTGGGTTTGAGGGAAACTCAGTT GTTGGAAGCAGCTTGAGTGATTTGTATTCTAAGTGTGGGCAGTTTAAGGAAGCTTGTGAG CTATTTAGTTCTCTTCAGAACGCGGATACTATCTCGTGGACGATGATGATATCTTCTTTA GTGGGAGCTCGTAAATGGAGAGAAGCGTTGCAGTTTTACTCTGAGATGGTTAAAGCTGGT GTTCCTCCTAACGAGTTCACATTTGTTAAGCTTTTAGGTGCCTCTTCCTTTCTCGGTTTG GAGTTTGGTAAAACGATTCATAGCAACATAATTGTCAGGGGAATTCCGCTGAATGTGGTA TTGAAGACATCTCTCGTTGATTTCTACTCGCAGTTTTCTAAAATGGAGGATGCTGTGAGG GTGTTGAATTCGAGTGGAGAACAAGACGTGTTTCTTTGGACGTCTGTGGTATCAGGGTTT GTAAGGAACTTGAGAGCCAAGGAAGCTGTTGGCACGTTTCTTGAGATGCGAAGTTTGGGT TTGCAACCAAATAACTTCACATACTCTGCAATCTTGAGCTTGTGTTCTGCTGTTCGTTCG CTGGATTTTGGGAAACAGATTCACTCACAGACAATTAAGGTTGGCTTCGAGGATAGCACT GATGTTGGAAATGCACTTGTAGATATGTATATGAAGTGCTCGGCATCAGAAGTAGAAGCT TCGAGAGTCTTTGGAGCAATGGTTTCACCAAACGTCGTCTCTTGGACAACGTTAATCTTA GGTCTTGTTGATCACGGGTTCGTGCAAGATTGTTTTGGACTGCTGATGGAGATGGTAAAA CGAGAGGTAGAACCCAATGTTGTTACCCTATCCGGTGTTCTCCGAGCCTGTAGCAAATTG AGACATGTAAGGCGGGTATTAGAGATTCATGCATATCTACTCAGAAGACACGTAGATGGT GAAATGGTAGTAGGGAATTCACTTGTCGATGCATATGCCAGCTCGAGGAAGGTGGATTAT GCCTGGAATGTGATTAGGTCGATGAAAAGGAGGGATAATATCACATACACGAGCTTGGTA ACAAGGTTTAATGAGTTGGGCAAGCATGAAATGGCACTGAGTGTCATCAATTATATGTAT GGTGATGGAATCAGAATGGATCAGTTAAGCTTACCCGGGTTTATCTCAGCTTCAGCCAAC TTGGGCGCTCTTGAAACTGGGAAACATCTTCATTGTTACTCCGTGAAATCCGGGTTTTCT GGTGCGGCTTCGGTTTTAAATAGTCTCGTTGACATGTATAGTAAATGTGGTAGCTTGGAA GATGCAAAGAAAGTTTTTGAAGAAATAGCTACGCCTGATGTGGTTTCTTGGAACGGGTTG GTATCTGGTTTGGCATCAAACGGTTTTATTTCATCTGCTCTATCTGCATTTGAGGAGATG AGGATGAAAGAAACCGAGCCCGATTCAGTAACGTTCCTGATATTGCTCTCTGCTTGTAGT AATGGAAGATTGACTGACTTGGGCCTTGAGTATTTCCAAGTAATGAAAAAGATTTATAAC ATTGAGCCACAGGTAGAGCACTATGTTCATCTAGTTGGTATCTTAGGTCGTGCTGGACGG CTAGAGGAAGCAACAGGAGTTGTAGAGACAATGCATTTAAAACCAAATGCTATGATCTTC AAAACGTTGTTGAGAGCTTGTAGATACCGTGGAAATCTGTCTTTAGGAGAAGATATGGCT AACAAAGGCTTAGCACTTGCACCATCTGATCCAGCCTTGTACATTCTTTTGGCTGACCTA TACGACGAATCTGGAAAACCAGAGTTAGCTCAAAAGACTCGAAATTTGATGACTGAGAAG CGCTTGAGTAAAAAGCTAGGCAAGAGCACTGTGGAGGTTCAAGGAAAAGTTCACAGCTTT GTCAGTGAGGATGTTACTAGAGTGGATAAAACGAATGGGATTTACGCAGAGATAGAATCG ATAAAGGAAGAGATCAAAAGGTTTGGTTCACCATACAGAGGTAATGAAAACGCAAGCTTT CACAGTGCAAAACAAGCTGTTGTGTATGGTTTTATCTATGCGTCACCAGAAGCCCCGGTT CATGTTGTTAAGAACAAAATTCTGTGTAAGGACTGCCATGAGTTCGTGTCCATCTTGACT CGGTTAGTCGATAAGAAAATAACTGTAAGAGATGGGAATCAGGTTCATATCTTTAAGAAT GGCGAATGTTCTTGCAAAAGGGAAGAAACATCATTTGTTTAA

Peptide Sequence

PEP ID	AT5G52850.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:21414935-21417616 REVERSE LENGTH=893 \| 201606
Sequence	MTSKVVAAAASAFLSRTNELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDL CNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGT HPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACE LFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGF VRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDST DVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK REVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDY AWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASAN LGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGL VSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYN IEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMA NKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSF VSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPV HVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSCKREETSFV

Transcript Sequence

Transcript ID	AT5G52850.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:21414935-21417616 REVERSE LENGTH=2682 \| 201606
Sequence	ATGACGAGCAAAGTAGTAGCAGCAGCAGCTTCTGCATTTCTCTCTCGCACTAACGAATTG GGTAATCTTCAAAAATCATGTATTCGGATTCTCTCCTTCTGCGAATCGAATTCATCACGT ATTGGTTTACACATCCACTGCCCAGTAATAAAGTTTGGTCTTTTAGAGAATCTCGACTTA TGCAACAATCTTTTGAGTCTTTACTTAAAAACCGATGGTATATGGAATGCACGTAAACTG TTCGATGAAATGTCTCACAGAACTGTTTTCGCATGGACAGTTATGATCTCTGCTTTTACC AAGAGCCAAGAGTTTGCATCAGCGCTTTCGTTGTTTGAGGAAATGATGGCTTCGGGAACA CACCCGAACGAATTCACTTTTTCCTCGGTGGTAAGATCTTGTGCTGGTTTAAGAGATATT AGTTACGGAGGTCGAGTTCATGGCTCTGTTATAAAGACTGGGTTTGAGGGAAACTCAGTT GTTGGAAGCAGCTTGAGTGATTTGTATTCTAAGTGTGGGCAGTTTAAGGAAGCTTGTGAG CTATTTAGTTCTCTTCAGAACGCGGATACTATCTCGTGGACGATGATGATATCTTCTTTA GTGGGAGCTCGTAAATGGAGAGAAGCGTTGCAGTTTTACTCTGAGATGGTTAAAGCTGGT GTTCCTCCTAACGAGTTCACATTTGTTAAGCTTTTAGGTGCCTCTTCCTTTCTCGGTTTG GAGTTTGGTAAAACGATTCATAGCAACATAATTGTCAGGGGAATTCCGCTGAATGTGGTA TTGAAGACATCTCTCGTTGATTTCTACTCGCAGTTTTCTAAAATGGAGGATGCTGTGAGG GTGTTGAATTCGAGTGGAGAACAAGACGTGTTTCTTTGGACGTCTGTGGTATCAGGGTTT GTAAGGAACTTGAGAGCCAAGGAAGCTGTTGGCACGTTTCTTGAGATGCGAAGTTTGGGT TTGCAACCAAATAACTTCACATACTCTGCAATCTTGAGCTTGTGTTCTGCTGTTCGTTCG CTGGATTTTGGGAAACAGATTCACTCACAGACAATTAAGGTTGGCTTCGAGGATAGCACT GATGTTGGAAATGCACTTGTAGATATGTATATGAAGTGCTCGGCATCAGAAGTAGAAGCT TCGAGAGTCTTTGGAGCAATGGTTTCACCAAACGTCGTCTCTTGGACAACGTTAATCTTA GGTCTTGTTGATCACGGGTTCGTGCAAGATTGTTTTGGACTGCTGATGGAGATGGTAAAA CGAGAGGTAGAACCCAATGTTGTTACCCTATCCGGTGTTCTCCGAGCCTGTAGCAAATTG AGACATGTAAGGCGGGTATTAGAGATTCATGCATATCTACTCAGAAGACACGTAGATGGT GAAATGGTAGTAGGGAATTCACTTGTCGATGCATATGCCAGCTCGAGGAAGGTGGATTAT GCCTGGAATGTGATTAGGTCGATGAAAAGGAGGGATAATATCACATACACGAGCTTGGTA ACAAGGTTTAATGAGTTGGGCAAGCATGAAATGGCACTGAGTGTCATCAATTATATGTAT GGTGATGGAATCAGAATGGATCAGTTAAGCTTACCCGGGTTTATCTCAGCTTCAGCCAAC TTGGGCGCTCTTGAAACTGGGAAACATCTTCATTGTTACTCCGTGAAATCCGGGTTTTCT GGTGCGGCTTCGGTTTTAAATAGTCTCGTTGACATGTATAGTAAATGTGGTAGCTTGGAA GATGCAAAGAAAGTTTTTGAAGAAATAGCTACGCCTGATGTGGTTTCTTGGAACGGGTTG GTATCTGGTTTGGCATCAAACGGTTTTATTTCATCTGCTCTATCTGCATTTGAGGAGATG AGGATGAAAGAAACCGAGCCCGATTCAGTAACGTTCCTGATATTGCTCTCTGCTTGTAGT AATGGAAGATTGACTGACTTGGGCCTTGAGTATTTCCAAGTAATGAAAAAGATTTATAAC ATTGAGCCACAGGTAGAGCACTATGTTCATCTAGTTGGTATCTTAGGTCGTGCTGGACGG CTAGAGGAAGCAACAGGAGTTGTAGAGACAATGCATTTAAAACCAAATGCTATGATCTTC AAAACGTTGTTGAGAGCTTGTAGATACCGTGGAAATCTGTCTTTAGGAGAAGATATGGCT AACAAAGGCTTAGCACTTGCACCATCTGATCCAGCCTTGTACATTCTTTTGGCTGACCTA TACGACGAATCTGGAAAACCAGAGTTAGCTCAAAAGACTCGAAATTTGATGACTGAGAAG CGCTTGAGTAAAAAGCTAGGCAAGAGCACTGTGGAGGTTCAAGGAAAAGTTCACAGCTTT GTCAGTGAGGATGTTACTAGAGTGGATAAAACGAATGGGATTTACGCAGAGATAGAATCG ATAAAGGAAGAGATCAAAAGGTTTGGTTCACCATACAGAGGTAATGAAAACGCAAGCTTT CACAGTGCAAAACAAGCTGTTGTGTATGGTTTTATCTATGCGTCACCAGAAGCCCCGGTT CATGTTGTTAAGAACAAAATTCTGTGTAAGGACTGCCATGAGTTCGTGTCCATCTTGACT CGGTTAGTCGATAAGAAAATAACTGTAAGAGATGGGAATCAGGTTCATATCTTTAAGAAT GGCGAATGTTCTTGCAAAAGGGAAGAAACATCATTTGTTTAA