Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G52560.1
CDS Infomation	\| UDP-sugar pyrophosphorylase \| Chr5:21331230-21334573 FORWARD LENGTH=1845 \| 201606
Sequence	ATGGCTTCTACGGTTGATTCCAATTTCTTCTCATCCGTCCCAGCTCTTCACAGTAACCTC GGACTTTTGTCTCCTGATCAGATCGAACTGGCGAAGATCTTATTAGAAAATGGTCAGAGT CATCTCTTCCAACAATGGCCTGAACTCGGTGTTGATGATAAAGAGAAGCTAGCTTTTTTC GATCAGATTGCTCGCTTAAATTCAAGCTATCCTGGAGGTTTAGCAGCATACATTAAGACT GCGAAAGAGCTTCTCGCTGATTCGAAAGTAGGGAAAAACCCATATGATGGTTTCTCTCCT TCTGTCCCTTCAGGAGAAAATCTCACTTTTGGTACTGACAACTTCATCGAAATGGAAAAA AGAGGTGTCGTCGAAGCTAGGAATGCTGCTTTTGTTCTGGTTGCTGGTGGTCTTGGCGAG CGTCTTGGTTACAATGGAATCAAGGTGGCACTTCCAAGGGAGACAACTACAGGGACATGC TTCTTGCAGCATTACATTGAATCTATATTGGCTCTTCAAGAAGCTAGCAACAAGATCGAT TCTGATGGAAGTGAGAGAGACATTCCTTTCATTATTATGACATCTGATGATACTCATTCA CGTACACTGGACCTGTTAGAGTTAAACTCTTATTTTGGAATGAAACCTACTCAAGTACAT CTTCTAAAACAGGAAAAAGTTGCATGTCTTGATGATAACGATGCCAGACTTGCATTAGAC CCTCACAACAAATACAGTATCCAGACAAAACCTCATGGACATGGTGATGTACATTCGCTT CTTTATTCCAGTGGCCTTCTTCATAAATGGCTTGAGGCTGGTTTAAAATGGGTTTTGTTT TTCCAAGATACAAATGGACTTCTCTTCAATGCAATTCCAGCTTCTTTGGGTGTGAGTGCT ACCAAACAGTATCATGTTAACTCTCTCGCTGTTCCTCGCAAGGCGAAGGAAGCTATTGGA GGAATTAGTAAACTTACTCACGTTGATGGGAGATCTATGGTAATCAATGTGGAGTACAAT CAACTTGATCCTCTACTTAGAGCATCTGGATTCCCTGATGGGGATGTTAATTGTGAGACG GGCTTCTCCCCATTCCCGGGAAATATTAATCAATTGATTCTGGAACTTGGTCCCTACAAA GACGAGTTGCAAAAAACTGGAGGGGCCATTAAAGAGTTTGTTAATCCAAAATACAAGGAT AGCACCAAAACAGCATTTAAATCTTCGACTCGTCTAGAGTGTATGATGCAAGATTATCCA AAGACATTGCCTCCTACGGCACGAGTTGGATTCACGGTGATGGATATATGGCTTGCTTAT GCACCCGTAAAGAATAACCCTGAAGATGCTGCTAAGGTACCAAAGGGAAACCCATATCAT AGTGCTACTTCTGGAGAAATGGCGATTTATCGTGCTAACAGCCTCATTCTTCAAAAGGCT GGTGTCAAAGTGGAAGAGCCTGTGAAGCAAGTCTTGAATGGCCAAGAGGTTGAAGTATGG TCTCGTATCACATGGAAACCCAAATGGGGAATGATCTTCTCTGATATCAAAAAGAAAGTC AGCGGGAACTGCGAGGTCTCTCAGAGATCCACAATGGCAATCAAGGGTCGTAATGTATTT ATCAAAGATCTCTCCTTGGACGGTGCTCTTATTGTAGATTCCATTGATGATGCAGAGGTA AAACTTGGAGGTTTGATAAAGAACAATGGTTGGACCATGGAGAGTGTAGATTACAAGGAC ACATCGGTTCCAGAAGAAATAAGAATCAGAGGTTTTAGATTCAACAAAGTGGAGCAACTC GAAAAGAAGTTAACTCAACCTGGCAAATTTTCTGTTGAAGATTGA

Peptide Sequence

PEP ID	AT5G52560.1
PEP Infomation	\| UDP-sugar pyrophosphorylase \| Chr5:21331230-21334573 FORWARD LENGTH=614 \| 201606
Sequence	MASTVDSNFFSSVPALHSNLGLLSPDQIELAKILLENGQSHLFQQWPELGVDDKEKLAFF DQIARLNSSYPGGLAAYIKTAKELLADSKVGKNPYDGFSPSVPSGENLTFGTDNFIEMEK RGVVEARNAAFVLVAGGLGERLGYNGIKVALPRETTTGTCFLQHYIESILALQEASNKID SDGSERDIPFIIMTSDDTHSRTLDLLELNSYFGMKPTQVHLLKQEKVACLDDNDARLALD PHNKYSIQTKPHGHGDVHSLLYSSGLLHKWLEAGLKWVLFFQDTNGLLFNAIPASLGVSA TKQYHVNSLAVPRKAKEAIGGISKLTHVDGRSMVINVEYNQLDPLLRASGFPDGDVNCET GFSPFPGNINQLILELGPYKDELQKTGGAIKEFVNPKYKDSTKTAFKSSTRLECMMQDYP KTLPPTARVGFTVMDIWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRANSLILQKA GVKVEEPVKQVLNGQEVEVWSRITWKPKWGMIFSDIKKKVSGNCEVSQRSTMAIKGRNVF IKDLSLDGALIVDSIDDAEVKLGGLIKNNGWTMESVDYKDTSVPEEIRIRGFRFNKVEQL EKKLTQPGKFSVED

Transcript Sequence

Transcript ID	AT5G52560.1
Transcript Infomation	\| UDP-sugar pyrophosphorylase \| Chr5:21330608-21334811 FORWARD LENGTH=2406 \| 201606
Sequence	TTTTGATTCGTTTCCACCAGACGAATCTTCGTAACGCATTTTCGTTGATTCACTTTCCAG CTTTATCTCAAACTCTCTCTCTGTCGTCTCGATCGATCTCCCAAATCTCAAATTCTGAAT TGATTTTTTTTGTTTATAAACAAAGCAAACAAAACACATAATTTTGGTTCGGTCTTCTTC AATTTTCACCGACACAAACCCGTCTTTTCCTCTTCTCTCTCATTTCTATCAATTTTTCTC TACAATTCCCCAGTCGTCGAAGAAGCTACAGCTTGCAATTTGCTCGTGTTCTCTTCCATC ATTCCTTTGTTAAGAGCCTCTTCATGGCTTCTACGGTTGATTCCAATTTCTTCTCATCCG TCCCAGCTCTTCACAGTAACCTCGGACTTTTGTCTCCTGATCAGATCGAACTGGCGAAGA TCTTATTAGAAAATGGTCAGAGTCATCTCTTCCAACAATGGCCTGAACTCGGTGTTGATG ATAAAGAGAAGCTAGCTTTTTTCGATCAGATTGCTCGCTTAAATTCAAGCTATCCTGGAG GTTTAGCAGCATACATTAAGACTGCGAAAGAGCTTCTCGCTGATTCGAAAGTAGGGAAAA ACCCATATGATGGTTTCTCTCCTTCTGTCCCTTCAGGAGAAAATCTCACTTTTGGTACTG ACAACTTCATCGAAATGGAAAAAAGAGGTGTCGTCGAAGCTAGGAATGCTGCTTTTGTTC TGGTTGCTGGTGGTCTTGGCGAGCGTCTTGGTTACAATGGAATCAAGGTGGCACTTCCAA GGGAGACAACTACAGGGACATGCTTCTTGCAGCATTACATTGAATCTATATTGGCTCTTC AAGAAGCTAGCAACAAGATCGATTCTGATGGAAGTGAGAGAGACATTCCTTTCATTATTA TGACATCTGATGATACTCATTCACGTACACTGGACCTGTTAGAGTTAAACTCTTATTTTG GAATGAAACCTACTCAAGTACATCTTCTAAAACAGGAAAAAGTTGCATGTCTTGATGATA ACGATGCCAGACTTGCATTAGACCCTCACAACAAATACAGTATCCAGACAAAACCTCATG GACATGGTGATGTACATTCGCTTCTTTATTCCAGTGGCCTTCTTCATAAATGGCTTGAGG CTGGTTTAAAATGGGTTTTGTTTTTCCAAGATACAAATGGACTTCTCTTCAATGCAATTC CAGCTTCTTTGGGTGTGAGTGCTACCAAACAGTATCATGTTAACTCTCTCGCTGTTCCTC GCAAGGCGAAGGAAGCTATTGGAGGAATTAGTAAACTTACTCACGTTGATGGGAGATCTA TGGTAATCAATGTGGAGTACAATCAACTTGATCCTCTACTTAGAGCATCTGGATTCCCTG ATGGGGATGTTAATTGTGAGACGGGCTTCTCCCCATTCCCGGGAAATATTAATCAATTGA TTCTGGAACTTGGTCCCTACAAAGACGAGTTGCAAAAAACTGGAGGGGCCATTAAAGAGT TTGTTAATCCAAAATACAAGGATAGCACCAAAACAGCATTTAAATCTTCGACTCGTCTAG AGTGTATGATGCAAGATTATCCAAAGACATTGCCTCCTACGGCACGAGTTGGATTCACGG TGATGGATATATGGCTTGCTTATGCACCCGTAAAGAATAACCCTGAAGATGCTGCTAAGG TACCAAAGGGAAACCCATATCATAGTGCTACTTCTGGAGAAATGGCGATTTATCGTGCTA ACAGCCTCATTCTTCAAAAGGCTGGTGTCAAAGTGGAAGAGCCTGTGAAGCAAGTCTTGA ATGGCCAAGAGGTTGAAGTATGGTCTCGTATCACATGGAAACCCAAATGGGGAATGATCT TCTCTGATATCAAAAAGAAAGTCAGCGGGAACTGCGAGGTCTCTCAGAGATCCACAATGG CAATCAAGGGTCGTAATGTATTTATCAAAGATCTCTCCTTGGACGGTGCTCTTATTGTAG ATTCCATTGATGATGCAGAGGTAAAACTTGGAGGTTTGATAAAGAACAATGGTTGGACCA TGGAGAGTGTAGATTACAAGGACACATCGGTTCCAGAAGAAATAAGAATCAGAGGTTTTA GATTCAACAAAGTGGAGCAACTCGAAAAGAAGTTAACTCAACCTGGCAAATTTTCTGTTG AAGATTGAAGTTATCTTTGCACATTTATGTGACACTTTTTTAAAAAGTGTTATTTGGCAA TATGATCAATTAGCAAATTAGCTATTTTTTTAAGAGAATGCCAAATGATCCATTAATTTG TCCTTCTAATGGAGAGCTTAATTCTTTCTTTCGTTTTGTTTCCAACGAAACACTTCCTTT TCTTTGTTTTTCAACAAAACCCGAATATATTGTTTCTTTATGTTTTTCTAAATCTTTATT AGCCTG