Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G52430.1
CDS Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr5:21283093-21285045 REVERSE LENGTH=1317 \| 201606
Sequence	ATGAGGAACGTTGTTAATAACAGCGTTGAGACTGTTAACGCCGCCGCTACCGCCATCGTC ACCGCCGAGTCTCGAGTACAGCCGTCTTCTTCTCAGAAGGGAAGATGGGGAAAATGTTGG AGTTTATATTCATGTTTTGGAACTCAGAAGAACAATAAAAGGATTGGTAATGCTGTGCTT GTACCTGAACCGGTTACATCTGGAGTTCCGGTAGTTACTGTTCAAAACTCAGCTACTTCA ACTACTGTTGTTCTTCCCTTTATAGCTCCTCCTTCATCTCCAGCTTCGTTTTTGCAATCG GATCCTTCATCGGTTTCTCACTCGCCTGTTGGTCCACTTTCTCTTACTAGCAATACATTC TCGCCTAAGGAGCCTCAATCTGTCTTTACCGTTGGACCTTATGCTAATGAAACTCAACCA GTCACTCCTCCGGTGTTCTCTGCGTTTATAACTGAGCCATCTACTGCACCGTATACTCCA CCTCCTGAATCATCAGTCCATATAACTACACCTTCTTCACCTGAAGTGCCCTTTGCTCAG TTGCTTACTTCTTCGTTGGAGCTAACTCGGAGGGATAGTACTAGTGGGATGAATCAAAAG TTTTCGTCTTCGCACTATGAGTTTCGGTCTAATCAGGTGTGTCCGGGGAGTCCTGGTGGT GGTAATCTAATCTCTCCCGGGTCAGTGATTTCAAACTCTGGTACATCTTCTCCTTACCCT GGTAAATCACCCATGGTTGAGTTTCGAATAGGCGAGCCTCCAAAGTTCTTGGGTTTTGAG CACTTTACAGCTCGTAAATGGGGATCGAGGTTCGGTTCTGGATCGATCACACCTGTTGGG CATGGTTCAGGTTTGGCTTCAGGCGCTCTGACACCAAATGGTCCAGAGATAGTATCTGGA AACTTAACACCCAACAATACCACATGGCCTCTTCAAAATCAGATCTCTGAGGTCGCTTCA CTGGCAAATTCGGATCATGGCTCTGAAGTCATGGTAGCAGATCACAGAGTTTCGTTTGAG TTAACAGGTGAAGACGTTGCACGTTGTCTTGCAAGCAAGCTAAATCGATCACACGACAGA ATGAACAACAATGACCGGATCGAAACAGAGGAGAGTTCATCAACAGACATAAGAAGAAAC ATAGAGAAAAGGTCAGGAGACAGAGAGAACGAACAGCATAGAATTCAGAAGCTGAGTTCC TCATCGATTGGATCTAGCAAAGAATTTAAATTCGACAACACGAAAGACGAGAATATCGAG AAGGTTGCAGGAAACAGCTGGAGTTTCTTCCCGGGGTTACGATCTGGAGTCAGCTAA

Peptide Sequence

PEP ID	AT5G52430.1
PEP Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr5:21283093-21285045 REVERSE LENGTH=438 \| 201606
Sequence	MRNVVNNSVETVNAAATAIVTAESRVQPSSSQKGRWGKCWSLYSCFGTQKNNKRIGNAVL VPEPVTSGVPVVTVQNSATSTTVVLPFIAPPSSPASFLQSDPSSVSHSPVGPLSLTSNTF SPKEPQSVFTVGPYANETQPVTPPVFSAFITEPSTAPYTPPPESSVHITTPSSPEVPFAQ LLTSSLELTRRDSTSGMNQKFSSSHYEFRSNQVCPGSPGGGNLISPGSVISNSGTSSPYP GKSPMVEFRIGEPPKFLGFEHFTARKWGSRFGSGSITPVGHGSGLASGALTPNGPEIVSG NLTPNNTTWPLQNQISEVASLANSDHGSEVMVADHRVSFELTGEDVARCLASKLNRSHDR MNNNDRIETEESSSTDIRRNIEKRSGDRENEQHRIQKLSSSSIGSSKEFKFDNTKDENIE KVAGNSWSFFPGLRSGVS

Transcript Sequence

Transcript ID	AT5G52430.1
Transcript Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr5:21282750-21285366 REVERSE LENGTH=1981 \| 201606
Sequence	TTTAAGTGAAGCGCGTGTGGTGGTGTGAAGGAAAGGAACCATGAACCATCTAAAATGTGA TGACGTGGCAAAAGCTCGTGGTGAAATTGAATGAAAAGCTGGACTAGATAACGACCGGTG TGAGTGAGAGAGAGAGAGAGAGAATTCGATCCATCATTATACAAAACCTTCTTCGCTTTT TATTTGATTTATTTATCCTTTTCTCATTTGATTTTCTCGGGAAAATCTCTCTGCGTAGTA GATCCAAGTGGTGGTTTCTGAGTAGTAGTAAGCAAGCAAATCTGGATGTTATTGTAGTCG GTGTGAATCTGAGTTCGAAAGATGAGGAACGTTGTTAATAACAGCGTTGAGACTGTTAAC GCCGCCGCTACCGCCATCGTCACCGCCGAGTCTCGAGTACAGCCGTCTTCTTCTCAGAAG GGAAGATGGGGAAAATGTTGGAGTTTATATTCATGTTTTGGAACTCAGAAGAACAATAAA AGGATTGGTAATGCTGTGCTTGTACCTGAACCGGTTACATCTGGAGTTCCGGTAGTTACT GTTCAAAACTCAGCTACTTCAACTACTGTTGTTCTTCCCTTTATAGCTCCTCCTTCATCT CCAGCTTCGTTTTTGCAATCGGATCCTTCATCGGTTTCTCACTCGCCTGTTGGTCCACTT TCTCTTACTAGCAATACATTCTCGCCTAAGGAGCCTCAATCTGTCTTTACCGTTGGACCT TATGCTAATGAAACTCAACCAGTCACTCCTCCGGTGTTCTCTGCGTTTATAACTGAGCCA TCTACTGCACCGTATACTCCACCTCCTGAATCATCAGTCCATATAACTACACCTTCTTCA CCTGAAGTGCCCTTTGCTCAGTTGCTTACTTCTTCGTTGGAGCTAACTCGGAGGGATAGT ACTAGTGGGATGAATCAAAAGTTTTCGTCTTCGCACTATGAGTTTCGGTCTAATCAGGTG TGTCCGGGGAGTCCTGGTGGTGGTAATCTAATCTCTCCCGGGTCAGTGATTTCAAACTCT GGTACATCTTCTCCTTACCCTGGTAAATCACCCATGGTTGAGTTTCGAATAGGCGAGCCT CCAAAGTTCTTGGGTTTTGAGCACTTTACAGCTCGTAAATGGGGATCGAGGTTCGGTTCT GGATCGATCACACCTGTTGGGCATGGTTCAGGTTTGGCTTCAGGCGCTCTGACACCAAAT GGTCCAGAGATAGTATCTGGAAACTTAACACCCAACAATACCACATGGCCTCTTCAAAAT CAGATCTCTGAGGTCGCTTCACTGGCAAATTCGGATCATGGCTCTGAAGTCATGGTAGCA GATCACAGAGTTTCGTTTGAGTTAACAGGTGAAGACGTTGCACGTTGTCTTGCAAGCAAG CTAAATCGATCACACGACAGAATGAACAACAATGACCGGATCGAAACAGAGGAGAGTTCA TCAACAGACATAAGAAGAAACATAGAGAAAAGGTCAGGAGACAGAGAGAACGAACAGCAT AGAATTCAGAAGCTGAGTTCCTCATCGATTGGATCTAGCAAAGAATTTAAATTCGACAAC ACGAAAGACGAGAATATCGAGAAGGTTGCAGGAAACAGCTGGAGTTTCTTCCCGGGGTTA CGATCTGGAGTCAGCTAACCAAATTAAAATGACATCTCTTCTTCTTCTTCCTCATTACCA AAGACAGAGATATAAAACCCTATAAGTAACAAACCTTGAACATGGATCGTGAAAAAAGGT AAGAGATTTGGGTTCTAACAACTTATACACACTGAATAAATAAGCTTAAAGCTTTGATTT GCAGTTAACTTCTGTACTCATGTAGTTGGAAACTTTGGAATATTCTTGGATCAGCTCCTA CATCTAATCTTGTTACATTGATATAAATTGTTTATTTCTTGTTTTACTGTTTCATACAAA TATATTGTTTGAACTGAGATCGTGAATGGTCTTATTCTATATCATTACTAAAACATTTTC A