Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G51540.1
CDS Infomation	\| Zincin-like metalloproteases family protein \| Chr5:20932071-20936284 FORWARD LENGTH=2121 \| 201606
Sequence	ATGTGGAAGCTGACGCGGCGACTGCAGCCGCATATCAATTCGACCCGATGGTTAGTCCGA AATTTCCGGAATGGAGGAGCTGGAGACGCCACCGGTCTCTATGGCTTCGATCATCTAAAA ACAGCTAAAGGGTTTCAGAGATTCGTTGCTGATGCCATTGAAAGGTCTGGTGAGTTGGTG AGCTACATATCAGGAATGCCTTCGTCTCCAGAGATTATTAAAGCCATGGATGAGATTTCA GACACTGTTTGTTGTGTTGTTGACTCTGCTGAACTCTGTAGACAAACTCATCCTGACAGG GAATTTGTTGAGGAAGCGAATAAAGCAGCAATTGAAATGAATGATTATCTACATCATCTT AACACGAACCATACTTTGTATGCTGCGGTGAAAAAAGCAGAGCAAGATTCTAACTTGCTT ACCAAAGAAGCAAGTAGGACCGCACATCACCTTCGAATGGACTTTGAACGGGGTGGCATT CATCTAGACCCTGAGAAGCTAGATAAAGTGAATAACTTAACAACCAACATATTTCAGTTA TGCAGGGAGTTCAGCGAAAATATTGCTGATGATCCAGGACATGTTGATATATTTCCAGGA TCACGCATCCCTCGACATCTGCATCATCTTCTCAACCCTACCTACCGATCCACTTCAGGG GGCTCAAGAGGGTCTACAAGATCAGCGCATAAGTCGAAACAGAAAGGGTTTCGAATAAAT ACTGATCCACGAACCGTTTCTTCCATTTTGCAATGGACATCAGACGAAGAGGTTAGAAAA ATGGTATACATCCAAGGGAACTCTGTTCCTCATGCAAATCACGGAGTTCTTGAGAAGCTT ATTGCTGCACGCCATGAGCTTTCCCAGATGATGGGGTGTAATTCTTATGCTGACATTATG GTCGAGCCAAACCTAGCAAAATCCCCAAAGGTTGTGACATCCTTCCTACAAGAACTGAGC AAGACAGTCAAACCGAAGGCGGACGAAGAATTCATAGCCATTAGAGACTTTAAAAGAGAG AAATGTGGTAATCCATCTGCAGAGTTAGAGCCATGGGATGAAACTTACTACACTTCAATG ATGAAATCCTCCATCAATGATGTGGACACTGCTGTTGTAGCATCATATTTTCCTCTGCCA CAGTGTATTGAAGGCCTAAAAGTGCTTGTTGAATCATTATTTGGTGCAACATTTCATACT ATTCCTCTCGCGCCAGGTGAATCTTGGCACCCAAATGTGGTTAAACTGTCTCTTCATCAC CCGGACGAGGGTGATCTCGGGTATCTTTACCTTGACTTATACTCAAGAAAAGGCAAGTAC CCTGGGTGTGCTAGCTTTGCAATCAGAGGAGGACGCAAGATTTCTGAGACAGAATACCAA CTTCCTGTTATAGCTCTTGTTTGCAATTTTTCGCGAGCTTGTGATTCGTCAATTGTGAAG CTTAATCACTCTGAAGTTGAAGTTTTGTTCCACGAATTCGGACATGCTCTTCACTCTCTG CTCTCACGAACGGATTACCAACATTTTTCTGGTACCCGGGTGGCTCTTGACTTGGCAGAA ATGCCTTCAAATCTATTTGAGTACTATGCATGGGACTATCGCCTCCTGAAGAGATTTGCC CGTCATTACTCGACCGGTGAGACAATACCCGAGAAGTTGGTTAATTCGTTACAAGGTGCG AGGAACATGTTTGCAGCAACGGAAATGCAACGCCAGGTCTTTTATGCGCTGATCGACCAA ATGTTGTTCGGGGAACAACCAGAGACAGCAAGAGATGTGAGTCACCTCGTGGCTGAACTG AAACGGCAGCACACTAGCTGGAACCATGTTGAAGGAACACATTGGTATATCCGATTCAGT CACCTACTTAACTATGGAGCAGGGTACTATAGCTACTTATACGCTAAATGCTTTGCATCG ACGATATGGCAATCAATATGTGAAGAAGATCCGCTTTCGTTGAACACAGGAACATTGCTG AGAGAGAAGTTCTTCAAACATGGAGGAGCCAAAGATCCAGCTGAGCTACTTACCGATCTA GCAGGGAAAGAGATCATTAGTGTTCATGGTGAAGGCATAGTTCCTGCAACCACGTATCTT TTAAACGAGCTTAGACTATAG

Peptide Sequence

PEP ID	AT5G51540.1
PEP Infomation	\| Zincin-like metalloproteases family protein \| Chr5:20932071-20936284 FORWARD LENGTH=706 \| 201606
Sequence	MWKLTRRLQPHINSTRWLVRNFRNGGAGDATGLYGFDHLKTAKGFQRFVADAIERSGELV SYISGMPSSPEIIKAMDEISDTVCCVVDSAELCRQTHPDREFVEEANKAAIEMNDYLHHL NTNHTLYAAVKKAEQDSNLLTKEASRTAHHLRMDFERGGIHLDPEKLDKVNNLTTNIFQL CREFSENIADDPGHVDIFPGSRIPRHLHHLLNPTYRSTSGGSRGSTRSAHKSKQKGFRIN TDPRTVSSILQWTSDEEVRKMVYIQGNSVPHANHGVLEKLIAARHELSQMMGCNSYADIM VEPNLAKSPKVVTSFLQELSKTVKPKADEEFIAIRDFKREKCGNPSAELEPWDETYYTSM MKSSINDVDTAVVASYFPLPQCIEGLKVLVESLFGATFHTIPLAPGESWHPNVVKLSLHH PDEGDLGYLYLDLYSRKGKYPGCASFAIRGGRKISETEYQLPVIALVCNFSRACDSSIVK LNHSEVEVLFHEFGHALHSLLSRTDYQHFSGTRVALDLAEMPSNLFEYYAWDYRLLKRFA RHYSTGETIPEKLVNSLQGARNMFAATEMQRQVFYALIDQMLFGEQPETARDVSHLVAEL KRQHTSWNHVEGTHWYIRFSHLLNYGAGYYSYLYAKCFASTIWQSICEEDPLSLNTGTLL REKFFKHGGAKDPAELLTDLAGKEIISVHGEGIVPATTYLLNELRL

Transcript Sequence

Transcript ID	AT5G51540.1
Transcript Infomation	\| Zincin-like metalloproteases family protein \| Chr5:20932031-20936413 FORWARD LENGTH=2290 \| 201606
Sequence	CAGAGGTCCTCTGTCACAAGCCGCAAGAAGAAGCAGAGCAATGTGGAAGCTGACGCGGCG ACTGCAGCCGCATATCAATTCGACCCGATGGTTAGTCCGAAATTTCCGGAATGGAGGAGC TGGAGACGCCACCGGTCTCTATGGCTTCGATCATCTAAAAACAGCTAAAGGGTTTCAGAG ATTCGTTGCTGATGCCATTGAAAGGTCTGGTGAGTTGGTGAGCTACATATCAGGAATGCC TTCGTCTCCAGAGATTATTAAAGCCATGGATGAGATTTCAGACACTGTTTGTTGTGTTGT TGACTCTGCTGAACTCTGTAGACAAACTCATCCTGACAGGGAATTTGTTGAGGAAGCGAA TAAAGCAGCAATTGAAATGAATGATTATCTACATCATCTTAACACGAACCATACTTTGTA TGCTGCGGTGAAAAAAGCAGAGCAAGATTCTAACTTGCTTACCAAAGAAGCAAGTAGGAC CGCACATCACCTTCGAATGGACTTTGAACGGGGTGGCATTCATCTAGACCCTGAGAAGCT AGATAAAGTGAATAACTTAACAACCAACATATTTCAGTTATGCAGGGAGTTCAGCGAAAA TATTGCTGATGATCCAGGACATGTTGATATATTTCCAGGATCACGCATCCCTCGACATCT GCATCATCTTCTCAACCCTACCTACCGATCCACTTCAGGGGGCTCAAGAGGGTCTACAAG ATCAGCGCATAAGTCGAAACAGAAAGGGTTTCGAATAAATACTGATCCACGAACCGTTTC TTCCATTTTGCAATGGACATCAGACGAAGAGGTTAGAAAAATGGTATACATCCAAGGGAA CTCTGTTCCTCATGCAAATCACGGAGTTCTTGAGAAGCTTATTGCTGCACGCCATGAGCT TTCCCAGATGATGGGGTGTAATTCTTATGCTGACATTATGGTCGAGCCAAACCTAGCAAA ATCCCCAAAGGTTGTGACATCCTTCCTACAAGAACTGAGCAAGACAGTCAAACCGAAGGC GGACGAAGAATTCATAGCCATTAGAGACTTTAAAAGAGAGAAATGTGGTAATCCATCTGC AGAGTTAGAGCCATGGGATGAAACTTACTACACTTCAATGATGAAATCCTCCATCAATGA TGTGGACACTGCTGTTGTAGCATCATATTTTCCTCTGCCACAGTGTATTGAAGGCCTAAA AGTGCTTGTTGAATCATTATTTGGTGCAACATTTCATACTATTCCTCTCGCGCCAGGTGA ATCTTGGCACCCAAATGTGGTTAAACTGTCTCTTCATCACCCGGACGAGGGTGATCTCGG GTATCTTTACCTTGACTTATACTCAAGAAAAGGCAAGTACCCTGGGTGTGCTAGCTTTGC AATCAGAGGAGGACGCAAGATTTCTGAGACAGAATACCAACTTCCTGTTATAGCTCTTGT TTGCAATTTTTCGCGAGCTTGTGATTCGTCAATTGTGAAGCTTAATCACTCTGAAGTTGA AGTTTTGTTCCACGAATTCGGACATGCTCTTCACTCTCTGCTCTCACGAACGGATTACCA ACATTTTTCTGGTACCCGGGTGGCTCTTGACTTGGCAGAAATGCCTTCAAATCTATTTGA GTACTATGCATGGGACTATCGCCTCCTGAAGAGATTTGCCCGTCATTACTCGACCGGTGA GACAATACCCGAGAAGTTGGTTAATTCGTTACAAGGTGCGAGGAACATGTTTGCAGCAAC GGAAATGCAACGCCAGGTCTTTTATGCGCTGATCGACCAAATGTTGTTCGGGGAACAACC AGAGACAGCAAGAGATGTGAGTCACCTCGTGGCTGAACTGAAACGGCAGCACACTAGCTG GAACCATGTTGAAGGAACACATTGGTATATCCGATTCAGTCACCTACTTAACTATGGAGC AGGGTACTATAGCTACTTATACGCTAAATGCTTTGCATCGACGATATGGCAATCAATATG TGAAGAAGATCCGCTTTCGTTGAACACAGGAACATTGCTGAGAGAGAAGTTCTTCAAACA TGGAGGAGCCAAAGATCCAGCTGAGCTACTTACCGATCTAGCAGGGAAAGAGATCATTAG TGTTCATGGTGAAGGCATAGTTCCTGCAACCACGTATCTTTTAAACGAGCTTAGACTATA GGAGAACAACGGAACAAACAATACTTTTAACACAAAATGCTCTTTATAATAGTTTATTGA GAAACGGCAAGTAGTTTGGGTTTGAGTAATGCGATGTCGTTTTCGAGTGAAATATAATAA TCCATGACTG