Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G50390.1
CDS Infomation	\| Pentatricopeptide repeat (PPR-like) superfamily protein \| Chr5:20520789-20522980 REVERSE LENGTH=2106 \| 201606
Sequence	ATGGAGATTCCACTCTCGCGTTACCAGAGCATAAGATTAGACGAGATTCGAGACTCTTCT TCCAATCCCAAGGTTCTCACTTTCCCGCGAAAATTCTCGTTACGAGGAAGAAGATGGAAG AACCCATTTGGAAGACTCAGTTGTTCTTCTGTAGTTCAAGGTCTGAAACCAAAACCAAAG CTGAAACCAGAACCAATTAGAATCGAGGTTAAGGAATCGAAAGATCAGATTTTGGATGAT ACCCAGATCAGTAAATCTGGTGTAACGATTTGTAGTCAGATAGAGAAGTTGGTTTTGTGT AATAGATTCAGAGAAGCTTTTGAATTGTTTGAGATTCTGGAGATTCGCTGTAGTTTTAAG GTTGGTGTTAGTACTTATGATGCTTTAGTGGAAGCTTGTATTCGTTTGAAATCGATTCGG TGTGTTAAAAGGGTTTATGGGTTTATGATGAGTAATGGGTTTGAGCCGGAGCAGTATATG ATGAACAGAATCTTGTTGATGCATGTCAAGTGTGGGATGATTATTGATGCACGTAGGTTG TTTGATGAAATCCCTGAGAGAAATTTGTATTCTTATTACTCGATTATCTCTGGGTTTGTT AATTTTGGGAATTATGTTGAAGCTTTTGAGTTGTTTAAGATGATGTGGGAGGAGCTTTCT GATTGTGAGACTCATACGTTTGCGGTGATGCTACGGGCCTCGGCTGGCTTAGGGTCTATT TATGTGGGGAAACAGTTACACGTTTGTGCGTTGAAGTTAGGAGTTGTTGATAATACCTTT GTCTCGTGTGGATTGATTGATATGTATAGCAAGTGTGGGGATATTGAAGATGCTCGATGT GCTTTTGAGTGTATGCCCGAGAAAACTACTGTTGCTTGGAACAACGTTATTGCGGGTTAT GCGCTTCATGGTTATAGTGAGGAAGCTCTGTGTTTGTTGTATGACATGCGAGACTCAGGT GTGTCTATTGATCAGTTCACACTTTCGATAATGATAAGAATTTCTACAAAGCTTGCAAAG CTTGAGCTTACTAAGCAGGCACACGCTAGTTTAATTCGAAACGGTTTTGAATCGGAAATC GTTGCAAACACAGCTCTTGTAGACTTTTATAGCAAATGGGGTAGAGTAGATACTGCTAGA TATGTTTTTGATAAATTGCCGAGAAAAAATATAATCTCATGGAACGCTTTGATGGGTGGA TATGCAAATCATGGTAGAGGAACTGATGCTGTTAAGTTGTTTGAGAAAATGATTGCAGCA AACGTCGCTCCAAACCATGTCACATTTCTTGCAGTTCTATCAGCTTGTGCCTATTCAGGT TTATCTGAGCAAGGTTGGGAGATTTTTCTATCGATGAGTGAGGTTCATGGGATCAAACCA AGGGCGATGCATTATGCCTGCATGATTGAGCTGTTGGGTAGAGACGGTTTATTAGATGAA GCCATTGCGTTTATCCGAAGAGCTCCTTTGAAAACCACGGTGAACATGTGGGCAGCACTC TTGAATGCCTGTAGGATGCAGGAAAACTTAGAGCTTGGAAGAGTGGTTGCTGAAAAACTC TATGGAATGGGACCCGAGAAGCTCGGAAACTACGTTGTGATGTATAATATGTACAACAGT ATGGGAAAAACTGCAGAAGCTGCAGGGGTTTTGGAGACATTGGAGAGCAAAGGATTAAGC ATGATGCCGGCTTGTACTTGGGTTGAGGTTGGAGATCAGACTCACAGCTTTCTTTCAGGA GATAGGTTTGATTCTTACAATGAGACGGTGAAAAGGCAGATATACCAAAAAGTGGATGAA CTAATGGAAGAGATTTCCGAGTATGGGTACTCAGAGGAGGAGCAACACCTTCTTCCAGAC GTAGATGAAAAGGAAGAAGAGCGAGTAGGGCGATATCACAGCGAGAAACTAGCCATAGCT TACGGATTGGTGAATACGCCGGAATGGAATCCATTGCAGATTACTCAGAACCATAGGATA TGCAAAAATTGCCACAAGGTGGTTGAGTTCATATCTTTGGTTACAGGACGAGAGATGGTA GTGAGAGACGCGAGCCGGTTCCATCATTTTAAAGAAGGGAAGTGTTCTTGTGGAGGTTAT TGGTGA

Peptide Sequence

PEP ID	AT5G50390.1
PEP Infomation	\| Pentatricopeptide repeat (PPR-like) superfamily protein \| Chr5:20520789-20522980 REVERSE LENGTH=701 \| 201606
Sequence	MEIPLSRYQSIRLDEIRDSSSNPKVLTFPRKFSLRGRRWKNPFGRLSCSSVVQGLKPKPK LKPEPIRIEVKESKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFK VGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRL FDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSI YVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGY ALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEI VANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAA NVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDE AIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNS MGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDE LMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRI CKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW

Transcript Sequence

Transcript ID	AT5G50390.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR-like) superfamily protein \| Chr5:20520600-20523212 REVERSE LENGTH=2527 \| 201606
Sequence	ACTGCCATTAGCGGAGCTCCCGATGCTGTGTGATGCTCTTCTCTCTCTATTTCAAAAATC ACTTCTTTTCCTTCTTCTTCTTTCAGCAACAAAACCCATTTGCTTCAGACATTGCGGAGC ATCAAGTAAACAAATCCATCTTTCCACGGTGCTTTCTCGGGCGATTCCGATCAATATGAT CTGGATCCTCTGTTTGCTCCTAATCTCTTATTGACCCCATTCTCTTCCAATCATGGAGAT TCCACTCTCGCGTTACCAGAGCATAAGATTAGACGAGATTCGAGACTCTTCTTCCAATCC CAAGGTTCTCACTTTCCCGCGAAAATTCTCGTTACGAGGAAGAAGATGGAAGAACCCATT TGGAAGACTCAGTTGTTCTTCTGTAGTTCAAGGTCTGAAACCAAAACCAAAGCTGAAACC AGAACCAATTAGAATCGAGGTTAAGGAATCGAAAGATCAGATTTTGGATGATACCCAGAT CAGTAAATCTGGTGTAACGATTTGTAGTCAGATAGAGAAGTTGGTTTTGTGTAATAGATT CAGAGAAGCTTTTGAATTGTTTGAGATTCTGGAGATTCGCTGTAGTTTTAAGGTTGGTGT TAGTACTTATGATGCTTTAGTGGAAGCTTGTATTCGTTTGAAATCGATTCGGTGTGTTAA AAGGGTTTATGGGTTTATGATGAGTAATGGGTTTGAGCCGGAGCAGTATATGATGAACAG AATCTTGTTGATGCATGTCAAGTGTGGGATGATTATTGATGCACGTAGGTTGTTTGATGA AATCCCTGAGAGAAATTTGTATTCTTATTACTCGATTATCTCTGGGTTTGTTAATTTTGG GAATTATGTTGAAGCTTTTGAGTTGTTTAAGATGATGTGGGAGGAGCTTTCTGATTGTGA GACTCATACGTTTGCGGTGATGCTACGGGCCTCGGCTGGCTTAGGGTCTATTTATGTGGG GAAACAGTTACACGTTTGTGCGTTGAAGTTAGGAGTTGTTGATAATACCTTTGTCTCGTG TGGATTGATTGATATGTATAGCAAGTGTGGGGATATTGAAGATGCTCGATGTGCTTTTGA GTGTATGCCCGAGAAAACTACTGTTGCTTGGAACAACGTTATTGCGGGTTATGCGCTTCA TGGTTATAGTGAGGAAGCTCTGTGTTTGTTGTATGACATGCGAGACTCAGGTGTGTCTAT TGATCAGTTCACACTTTCGATAATGATAAGAATTTCTACAAAGCTTGCAAAGCTTGAGCT TACTAAGCAGGCACACGCTAGTTTAATTCGAAACGGTTTTGAATCGGAAATCGTTGCAAA CACAGCTCTTGTAGACTTTTATAGCAAATGGGGTAGAGTAGATACTGCTAGATATGTTTT TGATAAATTGCCGAGAAAAAATATAATCTCATGGAACGCTTTGATGGGTGGATATGCAAA TCATGGTAGAGGAACTGATGCTGTTAAGTTGTTTGAGAAAATGATTGCAGCAAACGTCGC TCCAAACCATGTCACATTTCTTGCAGTTCTATCAGCTTGTGCCTATTCAGGTTTATCTGA GCAAGGTTGGGAGATTTTTCTATCGATGAGTGAGGTTCATGGGATCAAACCAAGGGCGAT GCATTATGCCTGCATGATTGAGCTGTTGGGTAGAGACGGTTTATTAGATGAAGCCATTGC GTTTATCCGAAGAGCTCCTTTGAAAACCACGGTGAACATGTGGGCAGCACTCTTGAATGC CTGTAGGATGCAGGAAAACTTAGAGCTTGGAAGAGTGGTTGCTGAAAAACTCTATGGAAT GGGACCCGAGAAGCTCGGAAACTACGTTGTGATGTATAATATGTACAACAGTATGGGAAA AACTGCAGAAGCTGCAGGGGTTTTGGAGACATTGGAGAGCAAAGGATTAAGCATGATGCC GGCTTGTACTTGGGTTGAGGTTGGAGATCAGACTCACAGCTTTCTTTCAGGAGATAGGTT TGATTCTTACAATGAGACGGTGAAAAGGCAGATATACCAAAAAGTGGATGAACTAATGGA AGAGATTTCCGAGTATGGGTACTCAGAGGAGGAGCAACACCTTCTTCCAGACGTAGATGA AAAGGAAGAAGAGCGAGTAGGGCGATATCACAGCGAGAAACTAGCCATAGCTTACGGATT GGTGAATACGCCGGAATGGAATCCATTGCAGATTACTCAGAACCATAGGATATGCAAAAA TTGCCACAAGGTGGTTGAGTTCATATCTTTGGTTACAGGACGAGAGATGGTAGTGAGAGA CGCGAGCCGGTTCCATCATTTTAAAGAAGGGAAGTGTTCTTGTGGAGGTTATTGGTGAAT CATCACAAGTAGAAGTAGATTCCATGTTCTTTTATTGTTATGGGTTCTTGTTTCTTTATG CTAAAGTTATATATATGTATAACACACGGAAAATAGTGTGATCATGTAACGGGTTTGTAT GATTCTTTTAGCATTGCTATCAATAAAGGTAAAAGTTTTTTTATCATTCACTGCTTTTAA CACCAAA