Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G50280.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:20459238-20461504 FORWARD LENGTH=2172 \| 201606
Sequence	ATGTCCATGGCGTCTTCTTCTCTTGCGACCCAATCCTTTTTTTCTTCCTTTCCTCTATCT CACCGACTTCACTTCCCTGTACCTTATCTTCTTCTTCGTTCTTCTTTCTTTCGAAAACCA CTTAGTCTCTCTGCTACTTCCCCTTCGTCATCTTCTTCTTCTCCTTCCATTTTCCTCTCC TGCTTCGATGACGCTTTGCCAGATAAGATCCAACAACCAGAAAATTCGACAATCAATAGC GAAGAAAGTGAATGTGAAGAAGAAGATGATGAAGAAGGAGATGATTTCACAGACCCAATT CTTAAATTCTTCAAGTCACGAACTTTAACATCAGAATCAACTGCAGACCCAGCTCGAGAA TCCAAATTCTCCCTCCAGAAGAATCGTCGAACTTCCTGGCATTTAGCTCCAGACTTCGCT GACCCCGAAACTGAAATCGAGTCTAAGCCTGAGGAATCCGTCTTTGTGACAAACCAACAA ACACTTGGTGTGCATATTCCATTCGAAAGTGGCGTCGCTAGGGAAATCTTGGAACTTGCT AAGAATTTGAAAGAGAATCAAACTTTGGGAGAGATGTTATCAGGTTTCGAAAGAAGGGTT AGTGATACAGAGTGTGTAGAGGCATTAGTGATGATGGGTGAATCTGGTTTTGTGAAGAGT TGTCTATATTTCTATGAGTGGATGAGTTTACAAGAACCTTCCCTTGCTTCGCCTCGTGCT TGCTCTGTGTTGTTTACATTGCTCGGTAGAGAAAGAATGGCTGATTACATTCTGCTTCTG CTAAGTAATTTACCAGATAAGGAAGAGTTTAGAGATGTTCGTCTCTACAATGCCGCCATT TCTGGTCTCTCAGCTTCTCAAAGGTATGATGATGCTTGGGAAGTGTATGAAGCTATGGAT AAGATCAATGTGTATCCGGACAATGTTACATGTGCTATATTGATCACAACCTTGAGGAAA GCAGGACGAAGTGCGAAAGAAGTTTGGGAGATATTCGAGAAGATGAGTGAGAAAGGTGTG AAGTGGAGTCAGGATGTTTTCGGTGGCCTTGTGAAGTCGTTTTGTGATGAAGGGCTTAAA GAAGAAGCTCTTGTGATTCAAACAGAGATGGAGAAGAAAGGTATCCGTTCAAACACGATT GTGTATAATACGTTGATGGATGCTTACAACAAATCCAACCACATAGAAGAAGTGGAAGGT CTTTTTACTGAAATGAGAGATAAAGGCTTGAAGCCTTCGGCTGCAACTTATAACATTCTT ATGGATGCTTATGCTAGAAGGATGCAGCCTGATATCGTTGAGACACTTCTGCGGGAGATG GAGGATTTAGGTTTAGAGCCAAATGTGAAATCGTACACGTGTTTGATTAGTGCGTATGGG AGGACGAAGAAGATGAGTGATATGGCTGCTGATGCTTTCCTGCGGATGAAGAAAGTAGGT TTGAAACCTTCTTCACATTCTTACACAGCTCTTATTCATGCTTACTCGGTTAGCGGGTGG CACGAAAAAGCTTATGCTTCCTTTGAAGAGATGTGTAAGGAGGGGATTAAACCGTCGGTT GAAACATACACATCAGTTCTTGATGCATTCAGACGATCAGGCGACACTGGAAAGCTGATG GAAATTTGGAAACTAATGCTGAGAGAAAAAATCAAAGGGACACGGATAACATATAACACT CTTCTCGATGGGTTTGCCAAGCAAGGACTCTACATTGAAGCAAGGGATGTTGTATCTGAG TTTAGTAAAATGGGTTTGCAGCCGAGTGTCATGACTTACAATATGCTGATGAATGCATAC GCACGGGGAGGACAAGATGCAAAACTGCCGCAACTGTTGAAGGAAATGGCTGCTCTTAAC TTAAAACCTGATTCCATCACATATTCAACAATGATCTACGCGTTTGTTCGTGTTCGAGAC TTCAAAAGGGCATTCTTTTACCACAAGATGATGGTTAAAAGCGGGCAAGTACCAGACCCA AGGTCCTATGAGAAACTTAGGGCGATTCTGGAAGACAAGGCAAAGACAAAGAACAGAAAG GATAAGACTGCCATACTTGGTATAATTAATAGCAAATTCGGTCGGGTTAAAGCTAAGACG AAGGGGAAGAAAGATGAGTTTTGGAAGTACAAGACGAATCGAACTACTTCTCCTGGTCGT CACCGATCTTGA

Peptide Sequence

PEP ID	AT5G50280.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:20459238-20461504 FORWARD LENGTH=723 \| 201606
Sequence	MSMASSSLATQSFFSSFPLSHRLHFPVPYLLLRSSFFRKPLSLSATSPSSSSSSPSIFLS CFDDALPDKIQQPENSTINSEESECEEEDDEEGDDFTDPILKFFKSRTLTSESTADPARE SKFSLQKNRRTSWHLAPDFADPETEIESKPEESVFVTNQQTLGVHIPFESGVAREILELA KNLKENQTLGEMLSGFERRVSDTECVEALVMMGESGFVKSCLYFYEWMSLQEPSLASPRA CSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMD KINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLK EEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNIL MDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVG LKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLM EIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAY ARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDP RSYEKLRAILEDKAKTKNRKDKTAILGIINSKFGRVKAKTKGKKDEFWKYKTNRTTSPGR HRS

Transcript Sequence

Transcript ID	AT5G50280.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:20458939-20461710 FORWARD LENGTH=2677 \| 201606
Sequence	TTCAATAGTGAACTTGCATTTTGTTTGTTAGTCTTTGATATTATATGGTCTTTGCTTATC GTTTTGTATCTTCACTCTCTTGACATCTCTCTTTATTAGGCTAGGATTTGAGGTTAAACT TTCATTTTCTTTGAATCTTTCACTAACTGGGCTTCTCTACTGCTACTTACTTATAGATGG GTTTCAACTTTCAAGTTAAATACCAAACCTAATTATAACTTTAAAGTTTGTCTCACGTCT TTTGCTCTTAAATTGTGAATTTTGAGCCTTTAGCTTCGCTAGAAAGTGGAAGCTGAGCCA TGTCCATGGCGTCTTCTTCTCTTGCGACCCAATCCTTTTTTTCTTCCTTTCCTCTATCTC ACCGACTTCACTTCCCTGTACCTTATCTTCTTCTTCGTTCTTCTTTCTTTCGAAAACCAC TTAGTCTCTCTGCTACTTCCCCTTCGTCATCTTCTTCTTCTCCTTCCATTTTCCTCTCCT GCTTCGATGACGCTTTGCCAGATAAGATCCAACAACCAGAAAATTCGACAATCAATAGCG AAGAAAGTGAATGTGAAGAAGAAGATGATGAAGAAGGAGATGATTTCACAGACCCAATTC TTAAATTCTTCAAGTCACGAACTTTAACATCAGAATCAACTGCAGACCCAGCTCGAGAAT CCAAATTCTCCCTCCAGAAGAATCGTCGAACTTCCTGGCATTTAGCTCCAGACTTCGCTG ACCCCGAAACTGAAATCGAGTCTAAGCCTGAGGAATCCGTCTTTGTGACAAACCAACAAA CACTTGGTGTGCATATTCCATTCGAAAGTGGCGTCGCTAGGGAAATCTTGGAACTTGCTA AGAATTTGAAAGAGAATCAAACTTTGGGAGAGATGTTATCAGGTTTCGAAAGAAGGGTTA GTGATACAGAGTGTGTAGAGGCATTAGTGATGATGGGTGAATCTGGTTTTGTGAAGAGTT GTCTATATTTCTATGAGTGGATGAGTTTACAAGAACCTTCCCTTGCTTCGCCTCGTGCTT GCTCTGTGTTGTTTACATTGCTCGGTAGAGAAAGAATGGCTGATTACATTCTGCTTCTGC TAAGTAATTTACCAGATAAGGAAGAGTTTAGAGATGTTCGTCTCTACAATGCCGCCATTT CTGGTCTCTCAGCTTCTCAAAGGTATGATGATGCTTGGGAAGTGTATGAAGCTATGGATA AGATCAATGTGTATCCGGACAATGTTACATGTGCTATATTGATCACAACCTTGAGGAAAG CAGGACGAAGTGCGAAAGAAGTTTGGGAGATATTCGAGAAGATGAGTGAGAAAGGTGTGA AGTGGAGTCAGGATGTTTTCGGTGGCCTTGTGAAGTCGTTTTGTGATGAAGGGCTTAAAG AAGAAGCTCTTGTGATTCAAACAGAGATGGAGAAGAAAGGTATCCGTTCAAACACGATTG TGTATAATACGTTGATGGATGCTTACAACAAATCCAACCACATAGAAGAAGTGGAAGGTC TTTTTACTGAAATGAGAGATAAAGGCTTGAAGCCTTCGGCTGCAACTTATAACATTCTTA TGGATGCTTATGCTAGAAGGATGCAGCCTGATATCGTTGAGACACTTCTGCGGGAGATGG AGGATTTAGGTTTAGAGCCAAATGTGAAATCGTACACGTGTTTGATTAGTGCGTATGGGA GGACGAAGAAGATGAGTGATATGGCTGCTGATGCTTTCCTGCGGATGAAGAAAGTAGGTT TGAAACCTTCTTCACATTCTTACACAGCTCTTATTCATGCTTACTCGGTTAGCGGGTGGC ACGAAAAAGCTTATGCTTCCTTTGAAGAGATGTGTAAGGAGGGGATTAAACCGTCGGTTG AAACATACACATCAGTTCTTGATGCATTCAGACGATCAGGCGACACTGGAAAGCTGATGG AAATTTGGAAACTAATGCTGAGAGAAAAAATCAAAGGGACACGGATAACATATAACACTC TTCTCGATGGGTTTGCCAAGCAAGGACTCTACATTGAAGCAAGGGATGTTGTATCTGAGT TTAGTAAAATGGGTTTGCAGCCGAGTGTCATGACTTACAATATGCTGATGAATGCATACG CACGGGGAGGACAAGATGCAAAACTGCCGCAACTGTTGAAGGAAATGGCTGCTCTTAACT TAAAACCTGATTCCATCACATATTCAACAATGATCTACGCGTTTGTTCGTGTTCGAGACT TCAAAAGGGCATTCTTTTACCACAAGATGATGGTTAAAAGCGGGCAAGTACCAGACCCAA GGTCCTATGAGAAACTTAGGGCGATTCTGGAAGACAAGGCAAAGACAAAGAACAGAAAGG ATAAGACTGCCATACTTGGTATAATTAATAGCAAATTCGGTCGGGTTAAAGCTAAGACGA AGGGGAAGAAAGATGAGTTTTGGAAGTACAAGACGAATCGAACTACTTCTCCTGGTCGTC ACCGATCTTGAAGGTAGCCTAAAAGCTATATAAATGCTTTAGTGGTACATAGTGAGGATT CTCAAGCTATACGAATCTAGTTGTATTCAATATATGTTCCTCTGTTCTTTGTACTTATAG CCTTATTTATTAGCATTCTAATTTTTTATGTTCCTAGGACATACCTTGGTCATGTGTAGT AAAAAGTGCAAAAGTTTAGCTTTATTATTCCGACAAG