Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G50170.1
CDS Infomation	\| C2 calcium/lipid-binding and GRAM domain containing protein \| Chr5:20421150-20425524 FORWARD LENGTH=3084 \| 201606
Sequence	ATGAGGCTCTACGTCTACATATTACAAGCCAAAGATTTACCAGCGAAAGAGACATTCGCT AAGCTTCACGTTGGGAGACACAAGTCTAAAACGAGAGTCGCGAGAGATACTTCGTCACCG ATCTGGAACGAGGAATTCGTTTTTCGAATCAGTGATGTCGACGAAGGTGATGATGTCGTT GTATCGATTCTTCACCATGAGCAGCAAGATCATCAGTCTATTGTTTCCACCGGTTTAATT GGTAAAGTTCGGATTCCGCTTACTTCCGTTGCTGCTGAAGAGAATCAAACTTTGTTGCCG ACTTGGTTTGTCATTGAGAAACCTAGTGATGGCAAGTTCGTTAACATTGAATGTGGGAAA ATTCTTCTGAGTTTGTCTTTGCAAGGGAAATGGGAAAGTACCTCTGGTGAGAAGGTTCTT AATGATAAGCAGGATATTATTAACTTGGAAGGTGTGAAAGAACTCGAAGGATCGCCTAAA GATTTGATCTCCTCCAGAGATGGGAAACGGCGTAAACACCATGATGGGAAGCACATAATG AAGAATATTGTGAACCACATTGACAAGCTTTTTCATAAGAAAGAGGAGATCTCTAAGAGA CTCCATGATGAGTCTTCAGTAGGACAAAGTGTAAACTCAAATTATGAGGATGCCACTGAC CAATGTTCTTCCTCTGCTACTTGTACTGGCTTTGAGGAAGGTCTTGACCTGATGCAGTCT AGTGATAGCGAAAGAGAAGAAATGCCTGAGAATCTTACAGGGGGAGTTCTTGTTGATCAG AAATATTTAGTCTCACCCTGTGAACTTAACAAATTTCTTTTTACGCCAAGTTCGCAATTT AGGAAAGAATTGGCTGAACTTCAAGGTCTATCAGATGTACAGGAAGGGCCTTGGACAATG ATGCAAGAAGATACTCCTCGTCTAACACGGGTTGTTACATACATGAGAGCTGCAACGAAG ATGGTCAAAGCAGTAAAAGCAACAGAAAATCAAGTTTACCGGAAAGCTAGCGGGAAGCAG TTTGCTGTATTTGTTAGTGTAAGCACACCAGATGTTCCCTACGGAAATACCTTCAAAATA GAGTTGCTTTACAAGATACTACCTGAAACAGAGCCAACTGCTGGTGGGGAAGCTTCTCGA CTGATCATATCATGGGGGATTCAATTTAGTCAAAGTACTATAATGAAAGGTATGATTGAA GGAGGTGCTAGGCAAGGGCTGAAAGAAAGCTTTGAACAATTTTCTAATCTCCTGGCTAAG ACTTATAAAACTCTTGATCCGGCTGTTGTATTGGACAAGGAGCAGGTTATAGCAACAGTG CAGTCAGAGCCAAAGACTGATTTGAAATCAGCTTTTCTATACTTCTGGAGTTCCTCTGTC ATCTGTGCTGTTCTTTTGTCTGTATATGTTGTAGTTCATATGCTGCACTGTGAGCCCAGC AAAATCCAAGGGTTTGAATTCTATGGGCTTGATTTGCCTGATAGTTTTGGAGAGCTATTC AGTAGTGGAATACTTGTTCTTCTTCTGGAGCGTGTTTACATAATGACTGTGCACTTCGTA CAAGCTAGATTACATCGAGGAAGAGATCAGGGAGTCAAAGCAAATGGTAAGGGGTGGATT CTGACAATAGCTTTAATTAAGGGAACAAATTTGGCTTCAGTGGAAGCAACAGAGCTTTTT GATCCCTATGTTGTTTTCACTTGCAATGGGAAAACAAGAACAAGTTCTGTCAAACTTCAA GCCCAGGATCCTCAGTGGAATGAGGTAATCGAGTTTGATGCAATGGAGGAACCACCATCG GTATTAGATGTGGAGGTATTTGATTTTGATGGTCCATTTGACCAGGGGGCTTCTCTTGGT CATGCAGAGATCAATTTCTTGAAACATACAGCCGATGAACTTGCTGACTTGAGTGTTGCT CTAGTTGGTAATCATGCTCAAGCGTCTCAGTCGAAGTTACAATTGAGAATTTTCCTGGAA AACAAGAACGGGGTTGAAACAATGAAGGATTACTTGAGTAAGGTGGAAAAGGAAGTCGGC AAGAAGTTGAACATTCGGTCACCACAGAAGAACTCTGCTTTCCAGAAACTGTTTGGTTTG CCACATGAAGAATTTCTTCTCAAAGAATATACTTGTTACTTGAAGAGAAAACTTCCGGTG CAGGGCAAGCTCTTTCTGTCTGCTAGAATTGTGGCGTTCTACTCAAATGTATTTGGACAC AAGACAAAGTTTTATTTCCTCTGGGAAGATATTGATGACATCCAAGTGCTTCCCCCAACT TTTGCTTCATTAGGAAGCCCTTTGCTACTCATTATTCTGAAAAAGAACCGAGGTCTTGAT GCAAAGCATGGAGCTAAATCTCAGGATGATGAAGGAAGACTTTCGTTCTATTTCCAGTCA TTTGTATCATTTGATGCCACCAGCAGGACAATCATGGCTTTGTGGAAAACAAGGACGTTA AGTGTGGATCATAGAGCACAAATAGTAGAAGAAGACCAAGATGTGGCAGATCCTTTCCTC TTGCCTGAAGCTGTTACAGTTGTTTCAGATGCGGATGCATTAATGATGTCAAAAGTGTAC ACGTGTGATCTACCTTGCGATGTAGAATTAGTAATGAAGATCTTTGGTGGAGGAGAATTG GAGCGTAAGATCATGGAGAAATCTGGATGTTTGAGTTACGCTAGTACAACATGGGAATCT AAAAAACCGGGAGTCTACGAAAGACGGCTTTCTTACAAGTATAACCACTATGTGTCTGTG TTTGGAGGTGGAGTCACATGTGCACAACAGAAATCTCCAGCTCCAAATGATGAAGGCTGG ATCTTGAATGAAATTGTGGCTCTCCACGATGTTCCATTCGGAGATCATTTTCGTGTTCAT ATAAGGTACGAGGTGAAGAAAGCAGGAGTTGATTGTAAAACAAGTAAGTGTGAAGTGTAT TTGAAGATCAGGTGGCTCAAAACAATAAAGTTTGAGCAAAGAATTAGCAAAAGTATAATG GAGAAATTTAGGAATCGATTCAAAGTTATATTTGATTTGTTCCAGAAAGAATCTGTTGCA AATTCATCTTTGACACTTCTCTGA

Peptide Sequence

PEP ID	AT5G50170.1
PEP Infomation	\| C2 calcium/lipid-binding and GRAM domain containing protein \| Chr5:20421150-20425524 FORWARD LENGTH=1027 \| 201606
Sequence	MRLYVYILQAKDLPAKETFAKLHVGRHKSKTRVARDTSSPIWNEEFVFRISDVDEGDDVV VSILHHEQQDHQSIVSTGLIGKVRIPLTSVAAEENQTLLPTWFVIEKPSDGKFVNIECGK ILLSLSLQGKWESTSGEKVLNDKQDIINLEGVKELEGSPKDLISSRDGKRRKHHDGKHIM KNIVNHIDKLFHKKEEISKRLHDESSVGQSVNSNYEDATDQCSSSATCTGFEEGLDLMQS SDSEREEMPENLTGGVLVDQKYLVSPCELNKFLFTPSSQFRKELAELQGLSDVQEGPWTM MQEDTPRLTRVVTYMRAATKMVKAVKATENQVYRKASGKQFAVFVSVSTPDVPYGNTFKI ELLYKILPETEPTAGGEASRLIISWGIQFSQSTIMKGMIEGGARQGLKESFEQFSNLLAK TYKTLDPAVVLDKEQVIATVQSEPKTDLKSAFLYFWSSSVICAVLLSVYVVVHMLHCEPS KIQGFEFYGLDLPDSFGELFSSGILVLLLERVYIMTVHFVQARLHRGRDQGVKANGKGWI LTIALIKGTNLASVEATELFDPYVVFTCNGKTRTSSVKLQAQDPQWNEVIEFDAMEEPPS VLDVEVFDFDGPFDQGASLGHAEINFLKHTADELADLSVALVGNHAQASQSKLQLRIFLE NKNGVETMKDYLSKVEKEVGKKLNIRSPQKNSAFQKLFGLPHEEFLLKEYTCYLKRKLPV QGKLFLSARIVAFYSNVFGHKTKFYFLWEDIDDIQVLPPTFASLGSPLLLIILKKNRGLD AKHGAKSQDDEGRLSFYFQSFVSFDATSRTIMALWKTRTLSVDHRAQIVEEDQDVADPFL LPEAVTVVSDADALMMSKVYTCDLPCDVELVMKIFGGGELERKIMEKSGCLSYASTTWES KKPGVYERRLSYKYNHYVSVFGGGVTCAQQKSPAPNDEGWILNEIVALHDVPFGDHFRVH IRYEVKKAGVDCKTSKCEVYLKIRWLKTIKFEQRISKSIMEKFRNRFKVIFDLFQKESVA NSSLTLL

Transcript Sequence

Transcript ID	AT5G50170.1
Transcript Infomation	\| C2 calcium/lipid-binding and GRAM domain containing protein \| Chr5:20420951-20425604 FORWARD LENGTH=3363 \| 201606
Sequence	GTAATGAGAAAACCGACCCATCATCCCAATCATCTCTTCCCGTGTCACTCTCTTCCTCTC CCACGTTTCTTCTCTCTTCCCTTTATGGGTTTTAACTTCTCCTTCTTCTTCTTCTTCAAT CTTCAGTTTTCAAATTCAACAACAATTCACATTTTGATTTCTTCATCATCTCTCTCTCTC TCGCTTCTCTCTCAAATCGATGAGGCTCTACGTCTACATATTACAAGCCAAAGATTTACC AGCGAAAGAGACATTCGCTAAGCTTCACGTTGGGAGACACAAGTCTAAAACGAGAGTCGC GAGAGATACTTCGTCACCGATCTGGAACGAGGAATTCGTTTTTCGAATCAGTGATGTCGA CGAAGGTGATGATGTCGTTGTATCGATTCTTCACCATGAGCAGCAAGATCATCAGTCTAT TGTTTCCACCGGTTTAATTGGTAAAGTTCGGATTCCGCTTACTTCCGTTGCTGCTGAAGA GAATCAAACTTTGTTGCCGACTTGGTTTGTCATTGAGAAACCTAGTGATGGCAAGTTCGT TAACATTGAATGTGGGAAAATTCTTCTGAGTTTGTCTTTGCAAGGGAAATGGGAAAGTAC CTCTGGTGAGAAGGTTCTTAATGATAAGCAGGATATTATTAACTTGGAAGGTGTGAAAGA ACTCGAAGGATCGCCTAAAGATTTGATCTCCTCCAGAGATGGGAAACGGCGTAAACACCA TGATGGGAAGCACATAATGAAGAATATTGTGAACCACATTGACAAGCTTTTTCATAAGAA AGAGGAGATCTCTAAGAGACTCCATGATGAGTCTTCAGTAGGACAAAGTGTAAACTCAAA TTATGAGGATGCCACTGACCAATGTTCTTCCTCTGCTACTTGTACTGGCTTTGAGGAAGG TCTTGACCTGATGCAGTCTAGTGATAGCGAAAGAGAAGAAATGCCTGAGAATCTTACAGG GGGAGTTCTTGTTGATCAGAAATATTTAGTCTCACCCTGTGAACTTAACAAATTTCTTTT TACGCCAAGTTCGCAATTTAGGAAAGAATTGGCTGAACTTCAAGGTCTATCAGATGTACA GGAAGGGCCTTGGACAATGATGCAAGAAGATACTCCTCGTCTAACACGGGTTGTTACATA CATGAGAGCTGCAACGAAGATGGTCAAAGCAGTAAAAGCAACAGAAAATCAAGTTTACCG GAAAGCTAGCGGGAAGCAGTTTGCTGTATTTGTTAGTGTAAGCACACCAGATGTTCCCTA CGGAAATACCTTCAAAATAGAGTTGCTTTACAAGATACTACCTGAAACAGAGCCAACTGC TGGTGGGGAAGCTTCTCGACTGATCATATCATGGGGGATTCAATTTAGTCAAAGTACTAT AATGAAAGGTATGATTGAAGGAGGTGCTAGGCAAGGGCTGAAAGAAAGCTTTGAACAATT TTCTAATCTCCTGGCTAAGACTTATAAAACTCTTGATCCGGCTGTTGTATTGGACAAGGA GCAGGTTATAGCAACAGTGCAGTCAGAGCCAAAGACTGATTTGAAATCAGCTTTTCTATA CTTCTGGAGTTCCTCTGTCATCTGTGCTGTTCTTTTGTCTGTATATGTTGTAGTTCATAT GCTGCACTGTGAGCCCAGCAAAATCCAAGGGTTTGAATTCTATGGGCTTGATTTGCCTGA TAGTTTTGGAGAGCTATTCAGTAGTGGAATACTTGTTCTTCTTCTGGAGCGTGTTTACAT AATGACTGTGCACTTCGTACAAGCTAGATTACATCGAGGAAGAGATCAGGGAGTCAAAGC AAATGGTAAGGGGTGGATTCTGACAATAGCTTTAATTAAGGGAACAAATTTGGCTTCAGT GGAAGCAACAGAGCTTTTTGATCCCTATGTTGTTTTCACTTGCAATGGGAAAACAAGAAC AAGTTCTGTCAAACTTCAAGCCCAGGATCCTCAGTGGAATGAGGTAATCGAGTTTGATGC AATGGAGGAACCACCATCGGTATTAGATGTGGAGGTATTTGATTTTGATGGTCCATTTGA CCAGGGGGCTTCTCTTGGTCATGCAGAGATCAATTTCTTGAAACATACAGCCGATGAACT TGCTGACTTGAGTGTTGCTCTAGTTGGTAATCATGCTCAAGCGTCTCAGTCGAAGTTACA ATTGAGAATTTTCCTGGAAAACAAGAACGGGGTTGAAACAATGAAGGATTACTTGAGTAA GGTGGAAAAGGAAGTCGGCAAGAAGTTGAACATTCGGTCACCACAGAAGAACTCTGCTTT CCAGAAACTGTTTGGTTTGCCACATGAAGAATTTCTTCTCAAAGAATATACTTGTTACTT GAAGAGAAAACTTCCGGTGCAGGGCAAGCTCTTTCTGTCTGCTAGAATTGTGGCGTTCTA CTCAAATGTATTTGGACACAAGACAAAGTTTTATTTCCTCTGGGAAGATATTGATGACAT CCAAGTGCTTCCCCCAACTTTTGCTTCATTAGGAAGCCCTTTGCTACTCATTATTCTGAA AAAGAACCGAGGTCTTGATGCAAAGCATGGAGCTAAATCTCAGGATGATGAAGGAAGACT TTCGTTCTATTTCCAGTCATTTGTATCATTTGATGCCACCAGCAGGACAATCATGGCTTT GTGGAAAACAAGGACGTTAAGTGTGGATCATAGAGCACAAATAGTAGAAGAAGACCAAGA TGTGGCAGATCCTTTCCTCTTGCCTGAAGCTGTTACAGTTGTTTCAGATGCGGATGCATT AATGATGTCAAAAGTGTACACGTGTGATCTACCTTGCGATGTAGAATTAGTAATGAAGAT CTTTGGTGGAGGAGAATTGGAGCGTAAGATCATGGAGAAATCTGGATGTTTGAGTTACGC TAGTACAACATGGGAATCTAAAAAACCGGGAGTCTACGAAAGACGGCTTTCTTACAAGTA TAACCACTATGTGTCTGTGTTTGGAGGTGGAGTCACATGTGCACAACAGAAATCTCCAGC TCCAAATGATGAAGGCTGGATCTTGAATGAAATTGTGGCTCTCCACGATGTTCCATTCGG AGATCATTTTCGTGTTCATATAAGGTACGAGGTGAAGAAAGCAGGAGTTGATTGTAAAAC AAGTAAGTGTGAAGTGTATTTGAAGATCAGGTGGCTCAAAACAATAAAGTTTGAGCAAAG AATTAGCAAAAGTATAATGGAGAAATTTAGGAATCGATTCAAAGTTATATTTGATTTGTT CCAGAAAGAATCTGTTGCAAATTCATCTTTGACACTTCTCTGACGAATAAAACTATACTT GTTGTAGATCTCTTCTCATTACTCAAAATTTTAAATCTTGACTACATATGTCACCTTCAC CTG