Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G49930.1
CDS Infomation	\| zinc knuckle (CCHC-type) family protein \| Chr5:20308260-20312736 REVERSE LENGTH=3243 \| 201606
Sequence	ATGGTGAAGGTACGAATGAACACGGCGGACGTCGCCGCCGAAGTCAAGTGCTTGAAGCGA TTAATCGGTATGAGATGCTCCAACGTCTATGATATATCTCCCAAGACGTATATGTTCAAG CTCTTGAATAGTAGCGGTATCACAGAATCTGGTGAAAGTGAGAAAGTTTTGCTTTTAATG GAAAGTGGTGTTCGTTTACATACCACAGCTTATGTCAGGGATAAGAGTAATACTCCATCT GGGTTTACTTTGAAGTTGAGGAAACATATCAGGACTAGGAGGCTTGAGGATGTTCGACAG CTTGGTTATGATAGGATTATTGTCTTCCAGTTTGGGCTAGGTGCTAATGCTCACTATGTT ATATTGGAGCTGTATGCTCAAGGAAACATAATTCTTACTGATTCTGAGTATATGATCATG ACACTCCTCCGCTCTCATAGAGATGACAATAAGGGTTTTGCTATTATGTCTCGTCACCGT TACCCGATAGAGATATGTCGAGTCTTTGAGAGAACAACTGTTTCAAAGCTTCAGGAATCA CTTACTGCTTTCGTGCTTAAGGATCATGACGCAAAACAGATTGAACCGAAGGAGCAGAAT GGTGGCAAAAAGGGTGGGAAGTCAAATGATTCTACGGGTGCCAAACAATATACATTGAAG AATATTCTTGGTGACGCTTTAGGCTATGGGCCACAGCTCTCAGAGCACATTATTCTGGAT GCTGGTCTAGTTCCAACTACCAAACTTTCAGAAGACAAGAAATTAGATGATAATGAGATT CAGTTATTGGTTCAAGCGGTGATCGTTTTTGAAGATTGGCTTGAAGATATTATAAATGGT CAAAAAGTTCCTGAAGGTTATATTCTAATGCAAAAACAAATTTTGGCAAATGACACGACT TCTGAATCAGGAGGTGTTAAAAAGATGTATGATGAGTTCTGTTCAATCTTACTAAATCAA TTCAAATCAAGAGTGTATGAAAAGTTTGAAACTTTCGATGCGGCTTTAGATGAGTTCTAC AGCAAAATTGAGAGCCAAAGGTCTGAACAACAACAAAAGGCAAAAGAAGATTCTGCCAGT CTGAAACTCAATAAGATTCGCCAAGATCAGGAGAACCGTGTTCAAATTCTGAAGAAAGAA GTCAACCATTGTGTTAATATGGCGGAATTAATCGAGTACAACTTAGAAGATGTAGATGCT GCCATATTAGCTGTTCGTGTAGCACTTGCAAAGGGTATGGGCTGGGATGATCTAGCTCGC ATGGTCAAGGAAGAAAAAAAATTAGGAAATCCTGTTGCTGGAGTCATTGACAGACTTTAT CTGGAGAAGAATTGCATGACCTTGTTGTTGTGCAACAATCTCGATGAAATGGATGATGAT GAGAAGACGGTTCCAGTGGAAAAGGTGGAGGTTGACTTATCACTTTCTGCGCATGGTAAT GCTAGGCGCTGGTATGAAATGAAGAAGAAGCAAGAAACCAAACAGGAGAAGACTGTTTCT GCCCATGAAAAGGCTTTTAGAGCAGCTGAGAAAAAGACCCGCCACCAACTTTCTCAGGAA AAAGTGGTTGCAACGATTTCACACATGAGAAAAGTCCACTGGTTTGAGAAATTTAATTGG TTCATTAGCAGTGAAAACTACTTGGTCATCAGTGGTCGTGATGCTCAGCAAAATGAGATG ATAGTTAAACGTTACATGTCAAAAGGAGATCTGTATGTACACGCAGAGCTTCATGGAGCA TCTAGTACTGTGATAAAGAATCATAAACCTGAACAAAATGTACCGCCTCTCACTTTAAAC CAAGCTGGATGTTTTACGGTTTGTCATAGTCAGGCCTGGGATTCCAAGATTGTTACTAGT GCATGGTGGGTTTATCCTCATCAGGTCACTAAAACAGCTCCTACTGGGGAATACCTTACA GTTGGAAGTTTCATGATACGAGGTAAGAAAAACTTTCTTCCACCACACCCACTCATCATG GGTTTTGGATTATTGTTTCGTTTGGACGAGAGCTCCTTGGGAGCTCATTTGAATGAGAGA AGGGTAAGAGGGGAAGAGGAAGGAATGAATGATGTAGTCATGGAAACACATGCTCCTGAT GAGCATTCAGATACTGAGTCAGAGAACGAAGCAGTGAATGAAGTGGTTTCTGCCTCAGGA GAAGTTGATTTGCAGGAATCAAGTACGGCATTGAGCCAAGATACTTCTTCTTTAGACATG AGTTCATCTGGTATTACTGAAGAAAATGTTGCATCAGCCACCTCACAGCTTGAAGATCTT CTTGATAGAACCCTTGGTCTTGGTGCTGCAACGGTGGCAGGCAAGAAAGATACAATAGAG ACATCAAAAGATGATATGGAAGAGAAGATGAAACAGGAAGAGAAGAATGCAGTAGTGAGA GATAAGCCTTATATGTCAAAAGCTGAAAGAAGAAAGCTTAAGATGGGCCAAAGCGGCAAC ACAGCTGCTGATGGTAACACTGGGCAAGAAAAGCAGCAACGAAAGGAAAAAGACGTTTCT TCTTTAAGCCAAGCTACCAAGAGCATACCTGATAACAAGCCAGCTGGGGAAAAAGTTAGC CGTGGGCAAAGGGGTAAACTTAAGAAAATGAAGGAGAAGTATGCTGATCAAGATGAAGAC GAAAGAAAAATACGGATGGCATTGTTGGCATCGTCTGGAAAGCCACAGAAGACTGATGTT GAATCACAGAATGCAAAAACCGCGGTCACTGAAGTGAAGAAACCTTCTGAAGAGACAGAC GATGCTGTGAAAATATGTTACAGGTGTAAGAAGGTTGGACATCTTGCTAGGGATTGTCAT GGGAAAGAAACTTCAGACATGGACAAAGTGGTGATGGAAGAAGACGATATTCATGAAGTT GGGGACGAAGAGAAAGAAAAACTGATTGATGTCGATTACCTTACTGGTAACCCGTTACCA ACCGACATCCTTTTATATGCGGTCCCCGTGTGCGGCCCCTACAATGCTCTCCAGTCATAT AAATACAGAGTCAAAGCGATTCCAGGCAGCATGAAGAAAGGAAAAGCTGCAAAAACTGCA ATGAATCTGTTCACACATATGTCGGAGGCGTCAGTAAGGGAGAAAGAGTTGATGAAAGCT TGTACGGATCCGGAGCTGATGGCTGCTCTTGTCGGGAATGTGAAGATCACAGCAGCAGGT TTGACGCAGTTGAAGCAGAAACAGAAGAAGGGCAAGAAAAGCGGGAAACAACAACATAGC TAG

Peptide Sequence

PEP ID	AT5G49930.1
PEP Infomation	\| zinc knuckle (CCHC-type) family protein \| Chr5:20308260-20312736 REVERSE LENGTH=1080 \| 201606
Sequence	MVKVRMNTADVAAEVKCLKRLIGMRCSNVYDISPKTYMFKLLNSSGITESGESEKVLLLM ESGVRLHTTAYVRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIIVFQFGLGANAHYV ILELYAQGNIILTDSEYMIMTLLRSHRDDNKGFAIMSRHRYPIEICRVFERTTVSKLQES LTAFVLKDHDAKQIEPKEQNGGKKGGKSNDSTGAKQYTLKNILGDALGYGPQLSEHIILD AGLVPTTKLSEDKKLDDNEIQLLVQAVIVFEDWLEDIINGQKVPEGYILMQKQILANDTT SESGGVKKMYDEFCSILLNQFKSRVYEKFETFDAALDEFYSKIESQRSEQQQKAKEDSAS LKLNKIRQDQENRVQILKKEVNHCVNMAELIEYNLEDVDAAILAVRVALAKGMGWDDLAR MVKEEKKLGNPVAGVIDRLYLEKNCMTLLLCNNLDEMDDDEKTVPVEKVEVDLSLSAHGN ARRWYEMKKKQETKQEKTVSAHEKAFRAAEKKTRHQLSQEKVVATISHMRKVHWFEKFNW FISSENYLVISGRDAQQNEMIVKRYMSKGDLYVHAELHGASSTVIKNHKPEQNVPPLTLN QAGCFTVCHSQAWDSKIVTSAWWVYPHQVTKTAPTGEYLTVGSFMIRGKKNFLPPHPLIM GFGLLFRLDESSLGAHLNERRVRGEEEGMNDVVMETHAPDEHSDTESENEAVNEVVSASG EVDLQESSTALSQDTSSLDMSSSGITEENVASATSQLEDLLDRTLGLGAATVAGKKDTIE TSKDDMEEKMKQEEKNAVVRDKPYMSKAERRKLKMGQSGNTAADGNTGQEKQQRKEKDVS SLSQATKSIPDNKPAGEKVSRGQRGKLKKMKEKYADQDEDERKIRMALLASSGKPQKTDV ESQNAKTAVTEVKKPSEETDDAVKICYRCKKVGHLARDCHGKETSDMDKVVMEEDDIHEV GDEEKEKLIDVDYLTGNPLPTDILLYAVPVCGPYNALQSYKYRVKAIPGSMKKGKAAKTA MNLFTHMSEASVREKELMKACTDPELMAALVGNVKITAAGLTQLKQKQKKGKKSGKQQHS

Transcript Sequence

Transcript ID	AT5G49930.1
Transcript Infomation	\| zinc knuckle (CCHC-type) family protein \| Chr5:20308033-20312892 REVERSE LENGTH=3626 \| 201606
Sequence	CCAACACACATGAATAGCTCACAAATTTCTCTTCTCCTTCTTCCTCTTTTCTCACAGCTT AGCACAGACCGAATTTTAATTTCTAACTTTGACAAACAGATTAAAACCTTTCTTCGATTC GACACTGAATCACGAAATTTCGAGAGAGACTAAGATATGGTGAAGGTACGAATGAACACG GCGGACGTCGCCGCCGAAGTCAAGTGCTTGAAGCGATTAATCGGTATGAGATGCTCCAAC GTCTATGATATATCTCCCAAGACGTATATGTTCAAGCTCTTGAATAGTAGCGGTATCACA GAATCTGGTGAAAGTGAGAAAGTTTTGCTTTTAATGGAAAGTGGTGTTCGTTTACATACC ACAGCTTATGTCAGGGATAAGAGTAATACTCCATCTGGGTTTACTTTGAAGTTGAGGAAA CATATCAGGACTAGGAGGCTTGAGGATGTTCGACAGCTTGGTTATGATAGGATTATTGTC TTCCAGTTTGGGCTAGGTGCTAATGCTCACTATGTTATATTGGAGCTGTATGCTCAAGGA AACATAATTCTTACTGATTCTGAGTATATGATCATGACACTCCTCCGCTCTCATAGAGAT GACAATAAGGGTTTTGCTATTATGTCTCGTCACCGTTACCCGATAGAGATATGTCGAGTC TTTGAGAGAACAACTGTTTCAAAGCTTCAGGAATCACTTACTGCTTTCGTGCTTAAGGAT CATGACGCAAAACAGATTGAACCGAAGGAGCAGAATGGTGGCAAAAAGGGTGGGAAGTCA AATGATTCTACGGGTGCCAAACAATATACATTGAAGAATATTCTTGGTGACGCTTTAGGC TATGGGCCACAGCTCTCAGAGCACATTATTCTGGATGCTGGTCTAGTTCCAACTACCAAA CTTTCAGAAGACAAGAAATTAGATGATAATGAGATTCAGTTATTGGTTCAAGCGGTGATC GTTTTTGAAGATTGGCTTGAAGATATTATAAATGGTCAAAAAGTTCCTGAAGGTTATATT CTAATGCAAAAACAAATTTTGGCAAATGACACGACTTCTGAATCAGGAGGTGTTAAAAAG ATGTATGATGAGTTCTGTTCAATCTTACTAAATCAATTCAAATCAAGAGTGTATGAAAAG TTTGAAACTTTCGATGCGGCTTTAGATGAGTTCTACAGCAAAATTGAGAGCCAAAGGTCT GAACAACAACAAAAGGCAAAAGAAGATTCTGCCAGTCTGAAACTCAATAAGATTCGCCAA GATCAGGAGAACCGTGTTCAAATTCTGAAGAAAGAAGTCAACCATTGTGTTAATATGGCG GAATTAATCGAGTACAACTTAGAAGATGTAGATGCTGCCATATTAGCTGTTCGTGTAGCA CTTGCAAAGGGTATGGGCTGGGATGATCTAGCTCGCATGGTCAAGGAAGAAAAAAAATTA GGAAATCCTGTTGCTGGAGTCATTGACAGACTTTATCTGGAGAAGAATTGCATGACCTTG TTGTTGTGCAACAATCTCGATGAAATGGATGATGATGAGAAGACGGTTCCAGTGGAAAAG GTGGAGGTTGACTTATCACTTTCTGCGCATGGTAATGCTAGGCGCTGGTATGAAATGAAG AAGAAGCAAGAAACCAAACAGGAGAAGACTGTTTCTGCCCATGAAAAGGCTTTTAGAGCA GCTGAGAAAAAGACCCGCCACCAACTTTCTCAGGAAAAAGTGGTTGCAACGATTTCACAC ATGAGAAAAGTCCACTGGTTTGAGAAATTTAATTGGTTCATTAGCAGTGAAAACTACTTG GTCATCAGTGGTCGTGATGCTCAGCAAAATGAGATGATAGTTAAACGTTACATGTCAAAA GGAGATCTGTATGTACACGCAGAGCTTCATGGAGCATCTAGTACTGTGATAAAGAATCAT AAACCTGAACAAAATGTACCGCCTCTCACTTTAAACCAAGCTGGATGTTTTACGGTTTGT CATAGTCAGGCCTGGGATTCCAAGATTGTTACTAGTGCATGGTGGGTTTATCCTCATCAG GTCACTAAAACAGCTCCTACTGGGGAATACCTTACAGTTGGAAGTTTCATGATACGAGGT AAGAAAAACTTTCTTCCACCACACCCACTCATCATGGGTTTTGGATTATTGTTTCGTTTG GACGAGAGCTCCTTGGGAGCTCATTTGAATGAGAGAAGGGTAAGAGGGGAAGAGGAAGGA ATGAATGATGTAGTCATGGAAACACATGCTCCTGATGAGCATTCAGATACTGAGTCAGAG AACGAAGCAGTGAATGAAGTGGTTTCTGCCTCAGGAGAAGTTGATTTGCAGGAATCAAGT ACGGCATTGAGCCAAGATACTTCTTCTTTAGACATGAGTTCATCTGGTATTACTGAAGAA AATGTTGCATCAGCCACCTCACAGCTTGAAGATCTTCTTGATAGAACCCTTGGTCTTGGT GCTGCAACGGTGGCAGGCAAGAAAGATACAATAGAGACATCAAAAGATGATATGGAAGAG AAGATGAAACAGGAAGAGAAGAATGCAGTAGTGAGAGATAAGCCTTATATGTCAAAAGCT GAAAGAAGAAAGCTTAAGATGGGCCAAAGCGGCAACACAGCTGCTGATGGTAACACTGGG CAAGAAAAGCAGCAACGAAAGGAAAAAGACGTTTCTTCTTTAAGCCAAGCTACCAAGAGC ATACCTGATAACAAGCCAGCTGGGGAAAAAGTTAGCCGTGGGCAAAGGGGTAAACTTAAG AAAATGAAGGAGAAGTATGCTGATCAAGATGAAGACGAAAGAAAAATACGGATGGCATTG TTGGCATCGTCTGGAAAGCCACAGAAGACTGATGTTGAATCACAGAATGCAAAAACCGCG GTCACTGAAGTGAAGAAACCTTCTGAAGAGACAGACGATGCTGTGAAAATATGTTACAGG TGTAAGAAGGTTGGACATCTTGCTAGGGATTGTCATGGGAAAGAAACTTCAGACATGGAC AAAGTGGTGATGGAAGAAGACGATATTCATGAAGTTGGGGACGAAGAGAAAGAAAAACTG ATTGATGTCGATTACCTTACTGGTAACCCGTTACCAACCGACATCCTTTTATATGCGGTC CCCGTGTGCGGCCCCTACAATGCTCTCCAGTCATATAAATACAGAGTCAAAGCGATTCCA GGCAGCATGAAGAAAGGAAAAGCTGCAAAAACTGCAATGAATCTGTTCACACATATGTCG GAGGCGTCAGTAAGGGAGAAAGAGTTGATGAAAGCTTGTACGGATCCGGAGCTGATGGCT GCTCTTGTCGGGAATGTGAAGATCACAGCAGCAGGTTTGACGCAGTTGAAGCAGAAACAG AAGAAGGGCAAGAAAAGCGGGAAACAACAACATAGCTAGGTTTTAGGTAACTGCTGCGTT GCAGCGAAGAAGGCTTTTACAAACATATAGCAGATTGGTTCATATCTTTGTATGTTCACT CTTGCAAAAACGAAACATCATGTTACAGCCCAAATATTATCAGAATCAAAGTGATTTGAA AATTTAGTAAATTTTGGCTAAAGAGAGCTCTAGTTATGAACTAATACATTTCATTATCAG TAAAATCCATAAATAGCTGAAAACAA