Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G49665.1
CDS Infomation	\| Zinc finger (C3HC4-type RING finger) family protein \| Chr5:20167119-20169420 REVERSE LENGTH=2223 \| 201606
Sequence	ATGGGTACTGGTTGGCGACGAGCCTTTTGCACCACCGCCCCTAGAAACAGCGATGCCGCG GCGCCGGATCTCGACAAGCAACGCACCGGCTATAATCTTACCCCAAGTCCTAGCCCAAGA AGCTGCGTTAAGCTAGCTTTTCTATCCGGAGGAAGTAATCCTTCAACTCCCCGATCAACT TCTAGTCCTAGCCTACGTTGTCGGACTGCAGATGCTCAAACTCCCACGGCGGAACAAACT TCGACGCCAAGATCGGCGACTAAGAGTCCAAGACTGTCTTTGGCCGCTATCTCTAACCCT TCTTCGCCTCGGTCACCGTTAAAACTCTCTCTGTTTCGCAACAGCTTCAAATTCAGAAGT ACTTGTGGAATATGTTTGAACAGTGTGAAAACAGGGCAAGGAACGGCGAAGTATACGGCC GAGTGTTCACACGCATTTCATTTCCCTTGTATTGCCGACTATGTTCGTAAACAGGGCAAG CTTGTTTGTCCTGTTTGTAATTCCATCTGGAAAGACGCTTCTCTCCTTGTTCCTCATAAG AATGCAACTGAATCTCCCCTGGACGACTCTGTTTCCGTAATCCAGGAGAAGCGCGTTGTT GTCACGTCTTCTCCCAGAGCAAAACCAAGGCCAAAGCAGAGTGATTATTCGAGATTTTAC GACGATGATGAGCCTTTGCTTTCGCCGAGGTTTGTCACTATACCTGAAGCTGATGAGAAT TGTGGAGGGGAAGAGGAGGATGACGTGCCTCAGTTCAAGGGATTTGTGGTGGATCCGAAC CCTTCTTTTGCTGTCAAAACTAATGAGATTCCGGTCAATGGTCGAGATTTTGGAAACGTT CAGGTGAGTTTGTTGCCTGAAGCGGCGGTTGTCTCTGTTGGGTGTGGTTACGAGACTCGT GCAGTGGCTTTGCGGGTGAAGGCGCCACCACCTCTAACAGCAAGAGGCGGTGTAGGGCGT AGGCTTTTAGATCCGTCGCAGCGTGCACCGGTGGACTTGGTGGTTGTAGTTGACGTAGGT GGAACAATGAACGGTGCGAAACTACAAATGGTCAAACGAGCCATGAGGCTTGTGATCTCC TCGCTTGGCTCAGCTGATCGGCTATCTATCGTTGCCGTCGTCATGACGGTTCCCAAGAGA CTCCTTCCGCTGAAGAGAATGACCGAACACGGCAAACGCTCTGCTGGAGCCGTGGTAGAT GGGTTGCTTTGTGGTCAAGGTTCTAACACAAGTGAGGCATTAAAAAAAGCATCAAGAGTG CTTGAAGATCGTAGGGAGAGAAACCCGGTGGCTAGCATCGTACTCCTAACGGACGGTCAG GGCCAGTTGAGTAAAGTCCACACAAATCAACGGTCAACAATAACTAACGTGGGATCAACA CGTTTTGCTCACATTGAGATCCCTGTTACTGAGCATGGCTTCGGAGAAAGCGGTGGATGT AGTAACGCCCCTGCAGAGGAAGCTTTTGCAAAATGCATAGGAGGATTGCTTAGCGTAGTG GTTCAAGATCTCAGGATCCAAATCCGGGTTGGATCAGGATCTGGACCATGTGAAATCTCA GCCATTTATCTATGTAATGGACGGCCTACTTTGGTTAGTTCCGGTTCCGGGTCAGTCCGG CTTGGGGACCTCTACGCAGGAGAGGAAAGAGAGCTTCTAGTTGAGCTTAGGGTCCCGTCA ACCGCCACTAGGGCCTACCAGATTTTGTCAGTTAGAGGTCTCTTTAAGGACCCATCGACA CAAGAAGTTGTATATGGACGAGACCAATCTCTCCGCGTTCCTCAAGCCGTTCGATCATCT TCTTCTCCTAGAATCGAACGGCTTAGAAGCCTCTTTATAGCGACTCGGGCTGTTGCCGAG TCGCGGAGGCTAGTGGAATACGGAGAATGCACAAGCGCATACCACTTGCTAACATCAGCG CGTGCGTTGCTTGGCCAGTCGGGAACGGTGGAAGCGGCTGAGTACATAAAGGTCGTGGAG GCAGAGCTGGTGGAAGTTCAATGGAGAGGACAACAACTAATGGAGTATCAAAGTCAGCAC CAGCAGCAACATAATCAACGGCGGAGAGGAAGCGAGAGAGAGACCACGACGACGATGACG TTGATGGATGAAAACGGTGAGCCGTTGACTCCAGCATCAGCGTGGAGAGCGGCTGAGAAA CTGGCTAAGTTAGCTATGATGAAGAAGAGCGACTTGCACGGCTTCGAAAACGCTAGATTT TAA

Peptide Sequence

PEP ID	AT5G49665.1
PEP Infomation	\| Zinc finger (C3HC4-type RING finger) family protein \| Chr5:20167119-20169420 REVERSE LENGTH=740 \| 201606
Sequence	MGTGWRRAFCTTAPRNSDAAAPDLDKQRTGYNLTPSPSPRSCVKLAFLSGGSNPSTPRST SSPSLRCRTADAQTPTAEQTSTPRSATKSPRLSLAAISNPSSPRSPLKLSLFRNSFKFRS TCGICLNSVKTGQGTAKYTAECSHAFHFPCIADYVRKQGKLVCPVCNSIWKDASLLVPHK NATESPLDDSVSVIQEKRVVVTSSPRAKPRPKQSDYSRFYDDDEPLLSPRFVTIPEADEN CGGEEEDDVPQFKGFVVDPNPSFAVKTNEIPVNGRDFGNVQVSLLPEAAVVSVGCGYETR AVALRVKAPPPLTARGGVGRRLLDPSQRAPVDLVVVVDVGGTMNGAKLQMVKRAMRLVIS SLGSADRLSIVAVVMTVPKRLLPLKRMTEHGKRSAGAVVDGLLCGQGSNTSEALKKASRV LEDRRERNPVASIVLLTDGQGQLSKVHTNQRSTITNVGSTRFAHIEIPVTEHGFGESGGC SNAPAEEAFAKCIGGLLSVVVQDLRIQIRVGSGSGPCEISAIYLCNGRPTLVSSGSGSVR LGDLYAGEERELLVELRVPSTATRAYQILSVRGLFKDPSTQEVVYGRDQSLRVPQAVRSS SSPRIERLRSLFIATRAVAESRRLVEYGECTSAYHLLTSARALLGQSGTVEAAEYIKVVE AELVEVQWRGQQLMEYQSQHQQQHNQRRRGSERETTTTMTLMDENGEPLTPASAWRAAEK LAKLAMMKKSDLHGFENARF

Transcript Sequence

Transcript ID	AT5G49665.1
Transcript Infomation	\| Zinc finger (C3HC4-type RING finger) family protein \| Chr5:20166891-20169923 REVERSE LENGTH=2954 \| 201606
Sequence	CCTCTTGTCATTCATTTAATTGTACTTTTTCAAATATAAAATGAAAATCGTCCAAAAAAG AAAATCGTCCACATAATAGACTTCTTCAATTAAAAAAAAATACTTTTTGTTTTCGACATT CGCGTCATCAAAAAGAAATCCCAAGAATTAAATGCAAAATCCAGCTACAGTATAAATATT TTAGGCTTATATATCGGACCCTTGAGAGGAATCATAGGAGAAGAAGCAGAGAGAGAGAGT CCAAACTTGGAATCTGGACAATAAAGAAAGAAAAACCATTTTAAAAATCTTTTTATACTA AAACTCCACAGATCTCCCATTCTGAGATGCAGAGTGATAATAACAACAATTGAGACCAAA GCAAAATCCGAAACTGTCACCGTTTTCCTTTGTCTTCTTCTCTGCCAAAATCTTTCAATC TTTATCTTCTTCCTTTTTCTTGTTTTTCTAAAACTTTCTCCATCTTGAAAACCAAAACAA CCCAAGATTAATAATATACACCAATGGGTACTGGTTGGCGACGAGCCTTTTGCACCACCG CCCCTAGAAACAGCGATGCCGCGGCGCCGGATCTCGACAAGCAACGCACCGGCTATAATC TTACCCCAAGTCCTAGCCCAAGAAGCTGCGTTAAGCTAGCTTTTCTATCCGGAGGAAGTA ATCCTTCAACTCCCCGATCAACTTCTAGTCCTAGCCTACGTTGTCGGACTGCAGATGCTC AAACTCCCACGGCGGAACAAACTTCGACGCCAAGATCGGCGACTAAGAGTCCAAGACTGT CTTTGGCCGCTATCTCTAACCCTTCTTCGCCTCGGTCACCGTTAAAACTCTCTCTGTTTC GCAACAGCTTCAAATTCAGAAGTACTTGTGGAATATGTTTGAACAGTGTGAAAACAGGGC AAGGAACGGCGAAGTATACGGCCGAGTGTTCACACGCATTTCATTTCCCTTGTATTGCCG ACTATGTTCGTAAACAGGGCAAGCTTGTTTGTCCTGTTTGTAATTCCATCTGGAAAGACG CTTCTCTCCTTGTTCCTCATAAGAATGCAACTGAATCTCCCCTGGACGACTCTGTTTCCG TAATCCAGGAGAAGCGCGTTGTTGTCACGTCTTCTCCCAGAGCAAAACCAAGGCCAAAGC AGAGTGATTATTCGAGATTTTACGACGATGATGAGCCTTTGCTTTCGCCGAGGTTTGTCA CTATACCTGAAGCTGATGAGAATTGTGGAGGGGAAGAGGAGGATGACGTGCCTCAGTTCA AGGGATTTGTGGTGGATCCGAACCCTTCTTTTGCTGTCAAAACTAATGAGATTCCGGTCA ATGGTCGAGATTTTGGAAACGTTCAGGTGAGTTTGTTGCCTGAAGCGGCGGTTGTCTCTG TTGGGTGTGGTTACGAGACTCGTGCAGTGGCTTTGCGGGTGAAGGCGCCACCACCTCTAA CAGCAAGAGGCGGTGTAGGGCGTAGGCTTTTAGATCCGTCGCAGCGTGCACCGGTGGACT TGGTGGTTGTAGTTGACGTAGGTGGAACAATGAACGGTGCGAAACTACAAATGGTCAAAC GAGCCATGAGGCTTGTGATCTCCTCGCTTGGCTCAGCTGATCGGCTATCTATCGTTGCCG TCGTCATGACGGTTCCCAAGAGACTCCTTCCGCTGAAGAGAATGACCGAACACGGCAAAC GCTCTGCTGGAGCCGTGGTAGATGGGTTGCTTTGTGGTCAAGGTTCTAACACAAGTGAGG CATTAAAAAAAGCATCAAGAGTGCTTGAAGATCGTAGGGAGAGAAACCCGGTGGCTAGCA TCGTACTCCTAACGGACGGTCAGGGCCAGTTGAGTAAAGTCCACACAAATCAACGGTCAA CAATAACTAACGTGGGATCAACACGTTTTGCTCACATTGAGATCCCTGTTACTGAGCATG GCTTCGGAGAAAGCGGTGGATGTAGTAACGCCCCTGCAGAGGAAGCTTTTGCAAAATGCA TAGGAGGATTGCTTAGCGTAGTGGTTCAAGATCTCAGGATCCAAATCCGGGTTGGATCAG GATCTGGACCATGTGAAATCTCAGCCATTTATCTATGTAATGGACGGCCTACTTTGGTTA GTTCCGGTTCCGGGTCAGTCCGGCTTGGGGACCTCTACGCAGGAGAGGAAAGAGAGCTTC TAGTTGAGCTTAGGGTCCCGTCAACCGCCACTAGGGCCTACCAGATTTTGTCAGTTAGAG GTCTCTTTAAGGACCCATCGACACAAGAAGTTGTATATGGACGAGACCAATCTCTCCGCG TTCCTCAAGCCGTTCGATCATCTTCTTCTCCTAGAATCGAACGGCTTAGAAGCCTCTTTA TAGCGACTCGGGCTGTTGCCGAGTCGCGGAGGCTAGTGGAATACGGAGAATGCACAAGCG CATACCACTTGCTAACATCAGCGCGTGCGTTGCTTGGCCAGTCGGGAACGGTGGAAGCGG CTGAGTACATAAAGGTCGTGGAGGCAGAGCTGGTGGAAGTTCAATGGAGAGGACAACAAC TAATGGAGTATCAAAGTCAGCACCAGCAGCAACATAATCAACGGCGGAGAGGAAGCGAGA GAGAGACCACGACGACGATGACGTTGATGGATGAAAACGGTGAGCCGTTGACTCCAGCAT CAGCGTGGAGAGCGGCTGAGAAACTGGCTAAGTTAGCTATGATGAAGAAGAGCGACTTGC ACGGCTTCGAAAACGCTAGATTTTAAATGTTATTTTTTTTGTTTCGTCCAGAAATATGAA TAATTTTTAATTCTGACAATACAAAGGAAAATGTGTAGTCGTCAGAGAGTGTCATAATAG CAGGCGGCAAATTACTTTTAATTTATTATTGCAAATGATAATTTAACCGAATTGAGTCCG TGGAATTTAATGTCTTCTTTGACATTTTGAGTTGTGCGATTCTATAACAATCTATCCTTT ATAGTAAACTCTAT