Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G49530.1
CDS Infomation	\| SIN-like family protein \| Chr5:20100934-20104242 FORWARD LENGTH=2070 \| 201606
Sequence	ATGGACTTTGATGATGATGACAAACCAAAAGAGGTTACCAAAACCCGTAGATTCGCTCCT GGCCGTGCCGGAAAGTCTAAACCCAAACCTAAACCGGAACCCACTGCTGATAAACCGGTA CAGCCGCCGCCGCAGTCACAAACTGAGTCCGTGAGCAAGACTGAGCATGACGTTGATGCT AAATTCGTTGGCACTAAGGTTGAAACTGAGGTTTGTAATGGCTCTGTGAAGATGGAGATC GATTCAAAAGTCGATAAAGAGCCTGAGATCATGGAAACTGAGTTGATGGAGGAAGATCAG CAGCTTCCATTGCAGGAGGAGAAGGAGGAAGAAGAAGAAGAAGACGACGTTGTTGTTCGT GAAATTGATGTTTTCTTTAAGCCGTCTATTGATGCTAATACTCAGCTTTATGTTTTACAA TATCCTCTAAGACCATCTTGGCGTCCATACGAAATGGATGAACGTTGCGAAGAAGTTAGA GTGAATCCTTCTACATCGCAAGTGGAAATTGATTTGTCTATGGATGTTCATTCGAAGAAC TATGACTCCAATTTTGGACTAAATATGACTAAGCAGACCTTGAAAACAACATGGAAGCAG CCTCCTACTTTGGATTATGCTGTTGGGGTTCTTTCAGGTGATAAGTTACACTTGAATCCT GTTCATGCTGTTGCCCAGCTCCGGCCGTCTATGCAGTCTCTTTCATCCGACAAAAAAAAG AAACAAGAAGAATCCACTGAAGAATCTGTGGGAACATCCAAAAAGCAGAACAAGGGAGTG CAGCAGGCTTCGACGGATCAGAAACCAATTAATGAAGAAACTTGGGTTTCACTCAAGTAT CATGGACTTCAATCCGAATATTGCTCCAGATATCTTAACGGGATGATGGCGAATGGGAAC TCTTCGATAGATTTCAACATGAGCCCGGGCACTTATATCAACGAACTATGCCGTGGGGGA AGCAGCAGAAACTCTGAATCGAAAGAAACATTAAAAAGGGTCTTGCTCTCCCTACCACTT AAAGAACGTGTGCAAAAGTTGCTCTGCGAGGGATCTCCGTTGATTCGATACAGTGTTCTT AAACACTATGCTCCTGAGTTCTCAGACGAGGATTTCTTAGGGGCCCTCCAAGAATATGGC AGGTTAGTTCAAGGTTTATGGACTCCTAAAACTAGGCTACTAAAACTAGACGGGCCTGTA GAAGCTGCCAGGGATTATGTCCTGTCTCTGTTCAGCCAGAATACAACTATAAAGTACTCT GAAGTTGAAGCAACGGGTGACAAGATGAAACCTTTGATGGAAAGAATGTTGACTGAATTT GCCAAAGAAAGGCATGTGCTAAAAGATTGGAAGTTCAAAGAGCCCACTGATGTCTCATTC ATAAAATCCTACCCGGAGATTGTTAAGGAGCAAGATATTTTTTGGACGGATAAGAGAGAG AATCTAAAGTCGAGAATAACCGCCCAAGGAGGAAAAAGTAGAGCTGATAAAAGGAGGAAT GTTGTTGGCACAAGTTCTTCAGTTACAGTTAAACCGGAGGTTCCAACAACCCTCTCTGAC AAAGGAGGAAGTTCAAAAAATACGATACATCGTGTTGTTACACAAGAAATGCCAGAAGAA CTTAAGAAGGCGTTACCAAAGGCTTTGAAAAAGGTGTTTCAAACTCACAAAGTTTGCCGC TATGAGACGATCTGCCAAGGACTTAGGGATCTTGCAGTTTCGACATCGAATAATCCAAAA GCTGATTCAGGAATGGCGGTGAATGTGGCGCTAGCCGTGGATGCTTACCAGGGCGAGCTC GAAGACGTTATAAATGGAGTGGCTACTAACATTCACGGGTCTTATGTCTCCATATCGTCT CCAGACCATCCTGAATATGATTCTTTGAGGGAAGTGGTCATTAGCCTCTTAACCGGATCT CCACCTGGAACAAAGCTTATGAAGGCTGAGGTATTTGCAGCAGGCAGGACCAAACTTGAA CGTGAAATCACCAACAACGAATATATAAAGGTGATGCACGAGATCTGTGAAACCAACTCT TCAGGATGGGTTTTACAGAAAGCTCGATGA

Peptide Sequence

PEP ID	AT5G49530.1
PEP Infomation	\| SIN-like family protein \| Chr5:20100934-20104242 FORWARD LENGTH=689 \| 201606
Sequence	MDFDDDDKPKEVTKTRRFAPGRAGKSKPKPKPEPTADKPVQPPPQSQTESVSKTEHDVDA KFVGTKVETEVCNGSVKMEIDSKVDKEPEIMETELMEEDQQLPLQEEKEEEEEEDDVVVR EIDVFFKPSIDANTQLYVLQYPLRPSWRPYEMDERCEEVRVNPSTSQVEIDLSMDVHSKN YDSNFGLNMTKQTLKTTWKQPPTLDYAVGVLSGDKLHLNPVHAVAQLRPSMQSLSSDKKK KQEESTEESVGTSKKQNKGVQQASTDQKPINEETWVSLKYHGLQSEYCSRYLNGMMANGN SSIDFNMSPGTYINELCRGGSSRNSESKETLKRVLLSLPLKERVQKLLCEGSPLIRYSVL KHYAPEFSDEDFLGALQEYGRLVQGLWTPKTRLLKLDGPVEAARDYVLSLFSQNTTIKYS EVEATGDKMKPLMERMLTEFAKERHVLKDWKFKEPTDVSFIKSYPEIVKEQDIFWTDKRE NLKSRITAQGGKSRADKRRNVVGTSSSVTVKPEVPTTLSDKGGSSKNTIHRVVTQEMPEE LKKALPKALKKVFQTHKVCRYETICQGLRDLAVSTSNNPKADSGMAVNVALAVDAYQGEL EDVINGVATNIHGSYVSISSPDHPEYDSLREVVISLLTGSPPGTKLMKAEVFAAGRTKLE REITNNEYIKVMHEICETNSSGWVLQKAR

Transcript Sequence

Transcript ID	AT5G49530.1
Transcript Infomation	\| SIN-like family protein \| Chr5:20100545-20104605 FORWARD LENGTH=2621 \| 201606
Sequence	ATCTCAGTTCGATAATTCTTGTTCAAGGGGATCTCTCAGATCGAAGGTTCGATACTCAAA GATTTCGCTTTTTCTTTTCTTTTTGTTTCACTTTCTTCTTCCCAGCCCTTCTTCGCCGAC GTTTTCTTTTGCCCGGAGGAGCCGACTATTACTCAAGATTTTGATTCTGACTTTCAGGAA GTAAAAATATGGACTTTGATGATGATGACAAACCAAAAGAGGTTACCAAAACCCGTAGAT TCGCTCCTGGCCGTGCCGGAAAGTCTAAACCCAAACCTAAACCGGAACCCACTGCTGATA AACCGGTACAGCCGCCGCCGCAGTCACAAACTGAGTCCGTGAGCAAGACTGAGCATGACG TTGATGCTAAATTCGTTGGCACTAAGGTTGAAACTGAGGTTTGTAATGGCTCTGTGAAGA TGGAGATCGATTCAAAAGTCGATAAAGAGCCTGAGATCATGGAAACTGAGTTGATGGAGG AAGATCAGCAGCTTCCATTGCAGGAGGAGAAGGAGGAAGAAGAAGAAGAAGACGACGTTG TTGTTCGTGAAATTGATGTTTTCTTTAAGCCGTCTATTGATGCTAATACTCAGCTTTATG TTTTACAATATCCTCTAAGACCATCTTGGCGTCCATACGAAATGGATGAACGTTGCGAAG AAGTTAGAGTGAATCCTTCTACATCGCAAGTGGAAATTGATTTGTCTATGGATGTTCATT CGAAGAACTATGACTCCAATTTTGGACTAAATATGACTAAGCAGACCTTGAAAACAACAT GGAAGCAGCCTCCTACTTTGGATTATGCTGTTGGGGTTCTTTCAGGTGATAAGTTACACT TGAATCCTGTTCATGCTGTTGCCCAGCTCCGGCCGTCTATGCAGTCTCTTTCATCCGACA AAAAAAAGAAACAAGAAGAATCCACTGAAGAATCTGTGGGAACATCCAAAAAGCAGAACA AGGGAGTGCAGCAGGCTTCGACGGATCAGAAACCAATTAATGAAGAAACTTGGGTTTCAC TCAAGTATCATGGACTTCAATCCGAATATTGCTCCAGATATCTTAACGGGATGATGGCGA ATGGGAACTCTTCGATAGATTTCAACATGAGCCCGGGCACTTATATCAACGAACTATGCC GTGGGGGAAGCAGCAGAAACTCTGAATCGAAAGAAACATTAAAAAGGGTCTTGCTCTCCC TACCACTTAAAGAACGTGTGCAAAAGTTGCTCTGCGAGGGATCTCCGTTGATTCGATACA GTGTTCTTAAACACTATGCTCCTGAGTTCTCAGACGAGGATTTCTTAGGGGCCCTCCAAG AATATGGCAGGTTAGTTCAAGGTTTATGGACTCCTAAAACTAGGCTACTAAAACTAGACG GGCCTGTAGAAGCTGCCAGGGATTATGTCCTGTCTCTGTTCAGCCAGAATACAACTATAA AGTACTCTGAAGTTGAAGCAACGGGTGACAAGATGAAACCTTTGATGGAAAGAATGTTGA CTGAATTTGCCAAAGAAAGGCATGTGCTAAAAGATTGGAAGTTCAAAGAGCCCACTGATG TCTCATTCATAAAATCCTACCCGGAGATTGTTAAGGAGCAAGATATTTTTTGGACGGATA AGAGAGAGAATCTAAAGTCGAGAATAACCGCCCAAGGAGGAAAAAGTAGAGCTGATAAAA GGAGGAATGTTGTTGGCACAAGTTCTTCAGTTACAGTTAAACCGGAGGTTCCAACAACCC TCTCTGACAAAGGAGGAAGTTCAAAAAATACGATACATCGTGTTGTTACACAAGAAATGC CAGAAGAACTTAAGAAGGCGTTACCAAAGGCTTTGAAAAAGGTGTTTCAAACTCACAAAG TTTGCCGCTATGAGACGATCTGCCAAGGACTTAGGGATCTTGCAGTTTCGACATCGAATA ATCCAAAAGCTGATTCAGGAATGGCGGTGAATGTGGCGCTAGCCGTGGATGCTTACCAGG GCGAGCTCGAAGACGTTATAAATGGAGTGGCTACTAACATTCACGGGTCTTATGTCTCCA TATCGTCTCCAGACCATCCTGAATATGATTCTTTGAGGGAAGTGGTCATTAGCCTCTTAA CCGGATCTCCACCTGGAACAAAGCTTATGAAGGCTGAGGTATTTGCAGCAGGCAGGACCA AACTTGAACGTGAAATCACCAACAACGAATATATAAAGGTGATGCACGAGATCTGTGAAA CCAACTCTTCAGGATGGGTTTTACAGAAAGCTCGATGATGAGTTTATTAAATCATCATGA CTAGATTTTAATGGTCTATAAATTTTGATATGAGTAAACGGTTCAGTAGTTATGAGATAT TCATATTTTGTTTTTCCTTTTTGAAATCAAACAACCTTTTTTCTATTACTCAACTAGAGT TGGTAAGACAAGCCACACCAACACAGGAAAATAAACATAAGAAGCAACAAAAGAACTATA CAATACACATAGACGGCTAAGTTCAAACTTGACAGAGAGTGTTCTAATGTTCTCTATTGA AATCTTAAGCATATTCGAATATATTTTACATGCAAGAATGTAAAAAAAAAAGAAAACAAC AATGTGAACACATGAAATTGGAAGAAAGTGTAAATACTTGA