Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G49180.1
CDS Infomation	\| Plant invertase/pectin methylesterase inhibitor superfamily \| Chr5:19940783-19942876 REVERSE LENGTH=1716 \| 201606
Sequence	ATGGGGGTTGATGGTGAACTGAAAAAGAAGAAATGCATCATTGCTGGGGTTATCACAGCC TTGCTCGTTCTCATGGTTGTCGCTGTTGGCATCACAACATCAAGAAACACCAGTCATTCA GAAAAAATCGTCCCTGTGCAGATTAAAACAGCCACCACGGCAGTTGAAGCAGTTTGTGCA CCTACTGATTACAAAGAGACTTGTGTCAATAGTCTCATGAAAGCTTCTCCTGACTCTACT CAGCCTCTTGATCTCATTAAGCTTGGCTTCAACGTCACCATTCGATCCATAGAAGATAGC ATCAAGAAAGCTTCCGTGGAGCTGACAGCCAAGGCAGCTAATGACAAGGATACCAAAGGG GCTTTGGAGTTGTGTGAGAAGCTTATGAATGATGCTACAGATGATCTGAAGAAGTGTCTT GATAACTTTGATGGGTTCTCAATTCCTCAGATTGAGGACTTTGTCGAAGATCTTCGTGTT TGGCTTAGTGGCTCCATTGCTTATCAACAAACATGTATGGATACGTTTGAAGAAACTAAC TCGAAACTTTCACAAGACATGCAGAAAATCTTTAAAACATCTAGAGAACTCACTAGTAAT GGCCTTGCCATGATTACTAACATCTCTAACCTTCTCGGAGAGTTCAACGTCACAGGAGTA ACCGGGGATCTCGGTAAATACGCAAGAAAACTTTTGTCGGCGGAAGACGGTATACCAAGT TGGGTTGGACCAAACACTAGACGGCTCATGGCAACGAAAGGAGGTGTGAAAGCTAACGTG GTGGTTGCACACGACGGAAGTGGTCAGTACAAGACTATCAATGAAGCCTTGAATGCAGTG CCTAAAGCCAACCAAAAGCCATTTGTTATCTACATTAAGCAAGGTGTCTATAACGAGAAA GTTGACGTCACCAAGAAAATGACTCATGTCACTTTCATCGGTGATGGACCAACCAAAACT AAGATCACTGGTAGTCTCAACTATTACATTGGCAAGGTCAAGACATACCTTACTGCCACT GTTGCGATCAATGGTGATAACTTCACGGCGAAGAACATCGGGTTTGAAAACACTGCAGGT CCCGAAGGACATCAAGCTGTGGCCCTAAGAGTCTCGGCGGATTTGGCCGTCTTCTACAAC TGCCAAATCGATGGTTACCAAGACACACTCTACGTCCATTCTCATCGTCAATTCTTCCGT GACTGCACAGTCTCGGGCACCGTTGACTTCATTTTCGGCGATGGTATAGTAGTCTTACAA AACTGTAACATTGTTGTGAGAAAACCCATGAAAAGTCAGTCTTGCATGATCACAGCCCAA GGCCGCTCCGATAAACGTGAATCCACCGGACTCGTGCTACAAAACTGCCATATTACCGGA GAACCAGCGTATATTCCCGTAAAATCTATAAACAAAGCATATCTTGGAAGGCCATGGAAA GAGTTTTCAAGAACCATTATAATGGGAACAACCATAGACGACGTTATTGATCCAGCGGGA TGGCTTCCTTGGAATGGTGATTTTGCACTTAATACGCTTTACTATGCTGAGTATGAGAAT AATGGGCCTGGGTCAAACCAAGCCCAACGTGTTAAGTGGCCTGGAATTAAGAAACTATCG CCCAAGCAAGCTCTTCGATTTACTCCTGCTAGGTTTTTACGTGGTAACTTGTGGATTCCA CCAAATCGTGTGCCTTACATGGGGAATTTTCAGTAG

Peptide Sequence

PEP ID	AT5G49180.1
PEP Infomation	\| Plant invertase/pectin methylesterase inhibitor superfamily \| Chr5:19940783-19942876 REVERSE LENGTH=571 \| 201606
Sequence	MGVDGELKKKKCIIAGVITALLVLMVVAVGITTSRNTSHSEKIVPVQIKTATTAVEAVCA PTDYKETCVNSLMKASPDSTQPLDLIKLGFNVTIRSIEDSIKKASVELTAKAANDKDTKG ALELCEKLMNDATDDLKKCLDNFDGFSIPQIEDFVEDLRVWLSGSIAYQQTCMDTFEETN SKLSQDMQKIFKTSRELTSNGLAMITNISNLLGEFNVTGVTGDLGKYARKLLSAEDGIPS WVGPNTRRLMATKGGVKANVVVAHDGSGQYKTINEALNAVPKANQKPFVIYIKQGVYNEK VDVTKKMTHVTFIGDGPTKTKITGSLNYYIGKVKTYLTATVAINGDNFTAKNIGFENTAG PEGHQAVALRVSADLAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQ NCNIVVRKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWK EFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKLS PKQALRFTPARFLRGNLWIPPNRVPYMGNFQ

Transcript Sequence

Transcript ID	AT5G49180.1
Transcript Infomation	\| Plant invertase/pectin methylesterase inhibitor superfamily \| Chr5:19940462-19943015 REVERSE LENGTH=2176 \| 201606
Sequence	GTTTCTTCATTATATTTTGTTAAGTCCACTCTTCTCTCTCATATCTTCTAACCAAAACAG AGTCACAAGGGGCTCTTAAGCCCTTCCAACTAAATTCTTTTCTTTTGTTCTCTTGAAACT GAATCCACCAGACAAAAAAATGGGGGTTGATGGTGAACTGAAAAAGAAGAAATGCATCAT TGCTGGGGTTATCACAGCCTTGCTCGTTCTCATGGTTGTCGCTGTTGGCATCACAACATC AAGAAACACCAGTCATTCAGAAAAAATCGTCCCTGTGCAGATTAAAACAGCCACCACGGC AGTTGAAGCAGTTTGTGCACCTACTGATTACAAAGAGACTTGTGTCAATAGTCTCATGAA AGCTTCTCCTGACTCTACTCAGCCTCTTGATCTCATTAAGCTTGGCTTCAACGTCACCAT TCGATCCATAGAAGATAGCATCAAGAAAGCTTCCGTGGAGCTGACAGCCAAGGCAGCTAA TGACAAGGATACCAAAGGGGCTTTGGAGTTGTGTGAGAAGCTTATGAATGATGCTACAGA TGATCTGAAGAAGTGTCTTGATAACTTTGATGGGTTCTCAATTCCTCAGATTGAGGACTT TGTCGAAGATCTTCGTGTTTGGCTTAGTGGCTCCATTGCTTATCAACAAACATGTATGGA TACGTTTGAAGAAACTAACTCGAAACTTTCACAAGACATGCAGAAAATCTTTAAAACATC TAGAGAACTCACTAGTAATGGCCTTGCCATGATTACTAACATCTCTAACCTTCTCGGAGA GTTCAACGTCACAGGAGTAACCGGGGATCTCGGTAAATACGCAAGAAAACTTTTGTCGGC GGAAGACGGTATACCAAGTTGGGTTGGACCAAACACTAGACGGCTCATGGCAACGAAAGG AGGTGTGAAAGCTAACGTGGTGGTTGCACACGACGGAAGTGGTCAGTACAAGACTATCAA TGAAGCCTTGAATGCAGTGCCTAAAGCCAACCAAAAGCCATTTGTTATCTACATTAAGCA AGGTGTCTATAACGAGAAAGTTGACGTCACCAAGAAAATGACTCATGTCACTTTCATCGG TGATGGACCAACCAAAACTAAGATCACTGGTAGTCTCAACTATTACATTGGCAAGGTCAA GACATACCTTACTGCCACTGTTGCGATCAATGGTGATAACTTCACGGCGAAGAACATCGG GTTTGAAAACACTGCAGGTCCCGAAGGACATCAAGCTGTGGCCCTAAGAGTCTCGGCGGA TTTGGCCGTCTTCTACAACTGCCAAATCGATGGTTACCAAGACACACTCTACGTCCATTC TCATCGTCAATTCTTCCGTGACTGCACAGTCTCGGGCACCGTTGACTTCATTTTCGGCGA TGGTATAGTAGTCTTACAAAACTGTAACATTGTTGTGAGAAAACCCATGAAAAGTCAGTC TTGCATGATCACAGCCCAAGGCCGCTCCGATAAACGTGAATCCACCGGACTCGTGCTACA AAACTGCCATATTACCGGAGAACCAGCGTATATTCCCGTAAAATCTATAAACAAAGCATA TCTTGGAAGGCCATGGAAAGAGTTTTCAAGAACCATTATAATGGGAACAACCATAGACGA CGTTATTGATCCAGCGGGATGGCTTCCTTGGAATGGTGATTTTGCACTTAATACGCTTTA CTATGCTGAGTATGAGAATAATGGGCCTGGGTCAAACCAAGCCCAACGTGTTAAGTGGCC TGGAATTAAGAAACTATCGCCCAAGCAAGCTCTTCGATTTACTCCTGCTAGGTTTTTACG TGGTAACTTGTGGATTCCACCAAATCGTGTGCCTTACATGGGGAATTTTCAGTAGATTCC AATTGGTGAATTTTCCACTTTCTGTGTGCTCTTTAAAAAAAAAAATGAAGGTGAATAATT TATATGCGTGTCTTGTCTTAAAGTCCTGACTTGCCGAATCTAGTATCTTACTCTCAGCCA AGTTACTACATTGAAGATAAAAGGCTTGTCGTGTGCTCTTAGGACAAAATTGGTCAGGCT TGGATCTATGTTTTTGGTACAAATAAGTTGATCAGTAAAACTCATATAGATTTGTGGTTG ATCATTGGCCTTATCATTGTACCTTTATTACTAATTGGTACCGGTTCCTCGAGGTCAACG TGAAGAACCAGCAGAA