Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G48940.1
CDS Infomation	\| Leucine-rich repeat transmembrane protein kinase family protein \| Chr5:19839785-19843744 FORWARD LENGTH=3408 \| 201606
Sequence	ATGTCTTTGCAAATGCCGATTCCAAGAAAAAAAGCCTTAACTGTTTCTCATTTTTCCATT ACATTGTCTCTGTTTTTAGCTTTCTTCATCTCCTCGACCTCTGCATCAACCAATGAAGTC TCAGCTTTGATTTCTTGGCTTCACAGCTCGAACTCGCCGCCACCGTCAGTCTTCTCCGGC TGGAATCCTTCTGATTCTGACCCATGTCAATGGCCTTACATTACTTGTTCCTCCTCAGAC AACAAACTCGTTACAGAGATCAATGTCGTCTCTGTTCAGTTAGCTTTACCTTTCCCTCCT AACATTTCTTCGTTTACTTCACTTCAGAAACTCGTTATCTCCAACACTAATCTCACCGGA GCTATATCTTCTGAGATCGGAGATTGTTCGGAGCTTATAGTTATCGATTTAAGCTCAAAT AGTCTTGTTGGTGAAATACCTTCGAGTCTAGGGAAGCTCAAGAATCTTCAAGAACTTTGT TTAAACTCCAATGGCCTCACAGGAAAGATCCCACCGGAACTCGGCGACTGCGTTAGCCTC AAGAATCTTGAGATTTTCGATAACTACTTATCCGAGAATCTCCCGTTGGAGCTCGGAAAG ATCTCGACTCTTGAGAGCATAAGAGCCGGAGGAAACTCAGAGCTTTCAGGGAAGATCCCG GAGGAGATCGGAAACTGTAGGAATCTCAAGGTCTTAGGGTTAGCAGCAACGAAAATATCC GGTTCTTTACCTGTTTCGTTGGGTCAACTAAGCAAGCTCCAGTCTTTATCTGTCTATTCT ACAATGCTCTCAGGTGAGATCCCTAAAGAGCTTGGAAACTGCTCTGAACTTATCAATCTG TTTCTATACGACAATGACTTGTCCGGCACGCTTCCAAAAGAACTAGGAAAGCTTCAAAAC CTAGAGAAGATGCTTCTATGGCAGAATAATCTCCACGGACCTATCCCTGAGGAGATTGGA TTCATGAAAAGCTTAAACGCCATTGATCTCTCTATGAACTATTTCTCAGGAACCATCCCT AAATCGTTCGGTAACTTGTCGAATCTCCAAGAGCTTATGCTTAGCAGCAACAACATCACC GGGTCAATACCTTCGATTCTAAGTAACTGCACAAAGCTTGTTCAGTTCCAGATTGACGCC AATCAGATTTCAGGTTTGATTCCACCAGAGATTGGATTGCTTAAGGAGCTCAACATCTTC TTGGGATGGCAGAATAAGCTAGAAGGGAATATTCCGGACGAGTTAGCTGGTTGTCAGAAT CTTCAAGCTCTTGACTTGTCACAGAATTATCTCACCGGATCATTACCTGCAGGTTTGTTT CAGCTTCGTAATCTGACTAAGCTCTTGCTTATATCTAATGCCATCTCCGGTGTTATCCCA CTGGAGATCGGGAACTGCACTTCGCTTGTCAGATTAAGGCTTGTCAATAACAGAATCACC GGAGAAATCCCTAAAGGTATTGGATTTCTTCAGAACCTTAGCTTCCTCGACTTGTCTGAG AACAATCTCTCCGGTCCAGTTCCTTTGGAGATAAGTAATTGTAGACAACTCCAGATGCTT AACTTGAGCAACAACACTCTTCAAGGTTATCTTCCTCTGTCTTTATCATCGTTAACAAAG CTTCAAGTACTTGATGTCTCTTCCAATGACTTGACTGGCAAGATACCTGATAGTCTAGGT CATCTCATTTCACTCAACCGGCTCATTCTAAGTAAGAATTCTTTCAATGGAGAAATCCCT TCGTCTCTCGGTCACTGCACGAATCTTCAGCTTCTTGATCTCAGCAGTAATAACATCTCT GGAACTATACCGGAGGAGCTTTTTGACATCCAAGATCTAGACATTGCGTTAAACTTGAGC TGGAATTCATTAGATGGCTTTATCCCGGAAAGGATTTCCGCGCTTAACCGATTATCCGTG CTCGATATTTCGCATAACATGCTTTCAGGCGACCTTTCTGCGCTGTCCGGTCTAGAAAAC TTGGTTTCTCTGAACATCTCTCATAACAGATTCTCAGGTTATCTTCCAGATAGTAAAGTG TTTAGACAGCTGATAGGAGCAGAGATGGAAGGAAACAATGGACTCTGTTCCAAAGGTTTC AGGTCTTGCTTTGTAAGTAACAGTTCACAGTTAACTACACAGCGTGGTGTGCACTCACAT AGACTCAGGATAGCCATTGGATTGCTAATCAGCGTGACAGCGGTTCTAGCGGTATTAGGC GTGTTGGCGGTTATACGAGCTAAACAAATGATTCGAGATGATAACGATTCAGAGACTGGA GAAAATCTATGGACATGGCAATTCACACCTTTTCAGAAACTCAACTTCACAGTCGAACAT GTACTCAAGTGTTTGGTAGAAGGTAATGTTATAGGGAAAGGTTGCTCCGGGATAGTGTAC AAAGCTGAAATGCCTAACAGAGAAGTCATCGCGGTGAAAAAGCTCTGGCCAGTGACAGTA CCTAATCTGAATGAGAAAACTAAGTCATCAGGAGTTCGAGACTCATTCTCAGCTGAAGTA AAAACACTTGGATCGATCAGACACAAGAACATTGTACGCTTCTTGGGATGTTGTTGGAAC AAGAACACTAGACTTCTTATGTATGATTATATGTCAAATGGGAGTTTGGGAAGTTTGCTT CACGAAAGGAGCGGTGTATGTAGCTTAGGATGGGAAGTGAGGTACAAGATTATACTTGGT GCAGCTCAGGGTTTGGCTTACTTGCACCATGACTGTGTTCCTCCCATTGTTCATAGAGAC ATCAAGGCAAATAATATTCTGATTGGCCCTGATTTTGAACCTTACATTGGAGATTTCGGA CTCGCTAAGCTTGTTGATGATGGCGACTTTGCTCGTTCTTCCAACACCATTGCTGGTTCC TATGGTTACATAGCTCCAGAATACGGATACTCAATGAAGATAACAGAGAAAAGCGACGTG TACAGCTATGGAGTCGTAGTGCTCGAGGTACTAACGGGTAAGCAACCAATCGATCCAACG ATACCAGATGGACTCCACATAGTGGACTGGGTCAAGAAAATCAGAGACATACAAGTAATC GACCAAGGACTACAAGCAAGACCAGAGTCAGAGGTTGAAGAGATGATGCAAACGCTAGGA GTCGCGCTTTTATGCATTAATCCAATACCCGAAGACAGGCCTACAATGAAAGATGTGGCT GCTATGCTTAGTGAGATATGTCAAGAGAGAGAGGAATCGATGAAAGTTGATGGTTGCTCG GGAAGTTGTAACAATGGAAGAGAACGTGGCAAAGATGATTCGACTTCATCGGTTATGCAA CAAACGGCTAAGTATTTGAGAAGTAGTAGCACGAGTTTCTCTGCGTCTTCTTTGCTTTAC TCTTCTTCTTCTTCTGCTACTTCTAATGTTAGACCAAATCTTAAATAA

Peptide Sequence

PEP ID	AT5G48940.1
PEP Infomation	\| Leucine-rich repeat transmembrane protein kinase family protein \| Chr5:19839785-19843744 FORWARD LENGTH=1135 \| 201606
Sequence	MSLQMPIPRKKALTVSHFSITLSLFLAFFISSTSASTNEVSALISWLHSSNSPPPSVFSG WNPSDSDPCQWPYITCSSSDNKLVTEINVVSVQLALPFPPNISSFTSLQKLVISNTNLTG AISSEIGDCSELIVIDLSSNSLVGEIPSSLGKLKNLQELCLNSNGLTGKIPPELGDCVSL KNLEIFDNYLSENLPLELGKISTLESIRAGGNSELSGKIPEEIGNCRNLKVLGLAATKIS GSLPVSLGQLSKLQSLSVYSTMLSGEIPKELGNCSELINLFLYDNDLSGTLPKELGKLQN LEKMLLWQNNLHGPIPEEIGFMKSLNAIDLSMNYFSGTIPKSFGNLSNLQELMLSSNNIT GSIPSILSNCTKLVQFQIDANQISGLIPPEIGLLKELNIFLGWQNKLEGNIPDELAGCQN LQALDLSQNYLTGSLPAGLFQLRNLTKLLLISNAISGVIPLEIGNCTSLVRLRLVNNRIT GEIPKGIGFLQNLSFLDLSENNLSGPVPLEISNCRQLQMLNLSNNTLQGYLPLSLSSLTK LQVLDVSSNDLTGKIPDSLGHLISLNRLILSKNSFNGEIPSSLGHCTNLQLLDLSSNNIS GTIPEELFDIQDLDIALNLSWNSLDGFIPERISALNRLSVLDISHNMLSGDLSALSGLEN LVSLNISHNRFSGYLPDSKVFRQLIGAEMEGNNGLCSKGFRSCFVSNSSQLTTQRGVHSH RLRIAIGLLISVTAVLAVLGVLAVIRAKQMIRDDNDSETGENLWTWQFTPFQKLNFTVEH VLKCLVEGNVIGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEV KTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHERSGVCSLGWEVRYKIILG AAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGS YGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGLHIVDWVKKIRDIQVI DQGLQARPESEVEEMMQTLGVALLCINPIPEDRPTMKDVAAMLSEICQEREESMKVDGCS GSCNNGRERGKDDSTSSVMQQTAKYLRSSSTSFSASSLLYSSSSSATSNVRPNLK

Transcript Sequence

Transcript ID	AT5G48940.1
Transcript Infomation	\| Leucine-rich repeat transmembrane protein kinase family protein \| Chr5:19839663-19843859 FORWARD LENGTH=3645 \| 201606
Sequence	TTCTTATTGCTTATCTCTAAAGCAAAAACTTCCCTAAACCCTAAGCCAAAGGACTCAGAT CGATGCAGAACCAAGAAGGCTTGTTTTGGATTTGAGAGCCAAATGCAAAGAAAAAAACTC TTATGTCTTTGCAAATGCCGATTCCAAGAAAAAAAGCCTTAACTGTTTCTCATTTTTCCA TTACATTGTCTCTGTTTTTAGCTTTCTTCATCTCCTCGACCTCTGCATCAACCAATGAAG TCTCAGCTTTGATTTCTTGGCTTCACAGCTCGAACTCGCCGCCACCGTCAGTCTTCTCCG GCTGGAATCCTTCTGATTCTGACCCATGTCAATGGCCTTACATTACTTGTTCCTCCTCAG ACAACAAACTCGTTACAGAGATCAATGTCGTCTCTGTTCAGTTAGCTTTACCTTTCCCTC CTAACATTTCTTCGTTTACTTCACTTCAGAAACTCGTTATCTCCAACACTAATCTCACCG GAGCTATATCTTCTGAGATCGGAGATTGTTCGGAGCTTATAGTTATCGATTTAAGCTCAA ATAGTCTTGTTGGTGAAATACCTTCGAGTCTAGGGAAGCTCAAGAATCTTCAAGAACTTT GTTTAAACTCCAATGGCCTCACAGGAAAGATCCCACCGGAACTCGGCGACTGCGTTAGCC TCAAGAATCTTGAGATTTTCGATAACTACTTATCCGAGAATCTCCCGTTGGAGCTCGGAA AGATCTCGACTCTTGAGAGCATAAGAGCCGGAGGAAACTCAGAGCTTTCAGGGAAGATCC CGGAGGAGATCGGAAACTGTAGGAATCTCAAGGTCTTAGGGTTAGCAGCAACGAAAATAT CCGGTTCTTTACCTGTTTCGTTGGGTCAACTAAGCAAGCTCCAGTCTTTATCTGTCTATT CTACAATGCTCTCAGGTGAGATCCCTAAAGAGCTTGGAAACTGCTCTGAACTTATCAATC TGTTTCTATACGACAATGACTTGTCCGGCACGCTTCCAAAAGAACTAGGAAAGCTTCAAA ACCTAGAGAAGATGCTTCTATGGCAGAATAATCTCCACGGACCTATCCCTGAGGAGATTG GATTCATGAAAAGCTTAAACGCCATTGATCTCTCTATGAACTATTTCTCAGGAACCATCC CTAAATCGTTCGGTAACTTGTCGAATCTCCAAGAGCTTATGCTTAGCAGCAACAACATCA CCGGGTCAATACCTTCGATTCTAAGTAACTGCACAAAGCTTGTTCAGTTCCAGATTGACG CCAATCAGATTTCAGGTTTGATTCCACCAGAGATTGGATTGCTTAAGGAGCTCAACATCT TCTTGGGATGGCAGAATAAGCTAGAAGGGAATATTCCGGACGAGTTAGCTGGTTGTCAGA ATCTTCAAGCTCTTGACTTGTCACAGAATTATCTCACCGGATCATTACCTGCAGGTTTGT TTCAGCTTCGTAATCTGACTAAGCTCTTGCTTATATCTAATGCCATCTCCGGTGTTATCC CACTGGAGATCGGGAACTGCACTTCGCTTGTCAGATTAAGGCTTGTCAATAACAGAATCA CCGGAGAAATCCCTAAAGGTATTGGATTTCTTCAGAACCTTAGCTTCCTCGACTTGTCTG AGAACAATCTCTCCGGTCCAGTTCCTTTGGAGATAAGTAATTGTAGACAACTCCAGATGC TTAACTTGAGCAACAACACTCTTCAAGGTTATCTTCCTCTGTCTTTATCATCGTTAACAA AGCTTCAAGTACTTGATGTCTCTTCCAATGACTTGACTGGCAAGATACCTGATAGTCTAG GTCATCTCATTTCACTCAACCGGCTCATTCTAAGTAAGAATTCTTTCAATGGAGAAATCC CTTCGTCTCTCGGTCACTGCACGAATCTTCAGCTTCTTGATCTCAGCAGTAATAACATCT CTGGAACTATACCGGAGGAGCTTTTTGACATCCAAGATCTAGACATTGCGTTAAACTTGA GCTGGAATTCATTAGATGGCTTTATCCCGGAAAGGATTTCCGCGCTTAACCGATTATCCG TGCTCGATATTTCGCATAACATGCTTTCAGGCGACCTTTCTGCGCTGTCCGGTCTAGAAA ACTTGGTTTCTCTGAACATCTCTCATAACAGATTCTCAGGTTATCTTCCAGATAGTAAAG TGTTTAGACAGCTGATAGGAGCAGAGATGGAAGGAAACAATGGACTCTGTTCCAAAGGTT TCAGGTCTTGCTTTGTAAGTAACAGTTCACAGTTAACTACACAGCGTGGTGTGCACTCAC ATAGACTCAGGATAGCCATTGGATTGCTAATCAGCGTGACAGCGGTTCTAGCGGTATTAG GCGTGTTGGCGGTTATACGAGCTAAACAAATGATTCGAGATGATAACGATTCAGAGACTG GAGAAAATCTATGGACATGGCAATTCACACCTTTTCAGAAACTCAACTTCACAGTCGAAC ATGTACTCAAGTGTTTGGTAGAAGGTAATGTTATAGGGAAAGGTTGCTCCGGGATAGTGT ACAAAGCTGAAATGCCTAACAGAGAAGTCATCGCGGTGAAAAAGCTCTGGCCAGTGACAG TACCTAATCTGAATGAGAAAACTAAGTCATCAGGAGTTCGAGACTCATTCTCAGCTGAAG TAAAAACACTTGGATCGATCAGACACAAGAACATTGTACGCTTCTTGGGATGTTGTTGGA ACAAGAACACTAGACTTCTTATGTATGATTATATGTCAAATGGGAGTTTGGGAAGTTTGC TTCACGAAAGGAGCGGTGTATGTAGCTTAGGATGGGAAGTGAGGTACAAGATTATACTTG GTGCAGCTCAGGGTTTGGCTTACTTGCACCATGACTGTGTTCCTCCCATTGTTCATAGAG ACATCAAGGCAAATAATATTCTGATTGGCCCTGATTTTGAACCTTACATTGGAGATTTCG GACTCGCTAAGCTTGTTGATGATGGCGACTTTGCTCGTTCTTCCAACACCATTGCTGGTT CCTATGGTTACATAGCTCCAGAATACGGATACTCAATGAAGATAACAGAGAAAAGCGACG TGTACAGCTATGGAGTCGTAGTGCTCGAGGTACTAACGGGTAAGCAACCAATCGATCCAA CGATACCAGATGGACTCCACATAGTGGACTGGGTCAAGAAAATCAGAGACATACAAGTAA TCGACCAAGGACTACAAGCAAGACCAGAGTCAGAGGTTGAAGAGATGATGCAAACGCTAG GAGTCGCGCTTTTATGCATTAATCCAATACCCGAAGACAGGCCTACAATGAAAGATGTGG CTGCTATGCTTAGTGAGATATGTCAAGAGAGAGAGGAATCGATGAAAGTTGATGGTTGCT CGGGAAGTTGTAACAATGGAAGAGAACGTGGCAAAGATGATTCGACTTCATCGGTTATGC AACAAACGGCTAAGTATTTGAGAAGTAGTAGCACGAGTTTCTCTGCGTCTTCTTTGCTTT ACTCTTCTTCTTCTTCTGCTACTTCTAATGTTAGACCAAATCTTAAATAAATGCATGGGT AATTATGTTTTTAAGTGAACAAGTTTCTATGTCTAAAGTTTTTGTTTTATCTATATATGA CGTTGAGATGAACTCGGTGTTTCAAACCAAGAAAAATTAACGGAG