Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G48910.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:19832969-19834909 REVERSE LENGTH=1941 \| 201606
Sequence	ATGAACCCAACACAGACACTTTTCTCTCCCGGCGGTAACTCGCCGGCGTCTTCTCCGGCG AGTCATCCATCTTCACTCTTTCCTCAAATCAACAACTGTCGAACTATAAGAGACCTCTCT CAAATCCATGCCGTTTTCATTAAATCTGGTCAAATGCGAGACACTCTCGCCGCCGCAGAG ATTCTCCGATTCTGTGCTACCTCCGATCTCCACCACCGTGACCTTGACTACGCACATAAG ATCTTTAATCAAATGCCTCAACGAAATTGCTTCTCTTGGAATACTATAATCAGAGGTTTC AGTGAGAGTGACGAAGACAAAGCTCTGATCGCAATCACATTATTCTACGAGATGATGAGT GATGAGTTTGTTGAACCGAATCGGTTTACGTTTCCCTCTGTTCTTAAGGCTTGTGCGAAA ACTGGGAAGATTCAAGAAGGTAAGCAGATTCATGGTTTGGCTTTGAAGTATGGATTTGGT GGTGATGAATTTGTGATGAGTAATCTTGTTAGAATGTATGTGATGTGTGGTTTTATGAAA GATGCTCGTGTGTTGTTTTATAAGAACATTATAGAGAAAGATATGGTGGTGATGACTGAT AGAAGAAAGAGAGATGGTGAAATAGTTTTGTGGAATGTTATGATTGATGGTTATATGAGA CTTGGTGATTGTAAAGCTGCACGGATGTTGTTTGATAAAATGCGTCAAAGAAGCGTTGTT TCGTGGAATACGATGATATCGGGTTATTCGCTGAACGGGTTTTTCAAAGATGCTGTTGAG GTTTTTCGTGAGATGAAGAAAGGGGATATTAGACCGAATTATGTTACTTTGGTTAGTGTT CTTCCTGCTATTTCACGGCTTGGGTCTTTAGAGTTGGGAGAATGGTTGCATTTGTATGCA GAGGATAGTGGAATTAGGATTGATGATGTGCTTGGCTCTGCTTTGATTGATATGTATTCG AAATGTGGGATCATTGAGAAAGCGATTCATGTATTTGAGAGGTTACCTAGAGAGAACGTG ATTACTTGGAGTGCGATGATTAACGGGTTTGCTATACATGGCCAGGCAGGTGATGCTATT GACTGTTTTTGTAAAATGAGGCAGGCTGGAGTTCGACCTAGTGATGTTGCCTACATTAAT CTTTTGACTGCTTGTAGCCATGGCGGGTTGGTAGAAGAAGGAAGGAGATATTTCAGTCAG ATGGTGAGTGTGGATGGTTTAGAGCCTAGGATTGAACACTACGGGTGTATGGTTGATTTA TTGGGTCGTTCGGGTCTTCTTGATGAGGCTGAGGAGTTTATACTTAATATGCCTATAAAA CCAGATGATGTGATATGGAAAGCACTTTTGGGTGCTTGCAGAATGCAGGGAAATGTCGAG ATGGGCAAGCGCGTTGCCAATATTCTGATGGATATGGTTCCTCATGACAGTGGAGCTTAT GTCGCCCTCTCAAACATGTATGCTTCTCAAGGAAACTGGTCAGAGGTTTCAGAGATGAGG CTGAGAATGAAGGAGAAGGATATAAGAAAAGACCCTGGGTGTAGTTTGATCGACATTGAT GGCGTGCTTCATGAGTTTGTTGTGGAAGATGATTCACACCCAAAAGCCAAAGAAATCAAC TCAATGCTCGTAGAAATCTCAGACAAACTGAGACTAGCTGGGTATAGACCAATCACCACA CAGGTTTTGTTAAACTTGGAGGAAGAAGATAAAGAAAATGTACTTCATTACCACAGCGAG AAGATCGCTACAGCGTTTGGGTTGATAAGCACGAGCCCTGGCAAACCAATACGCATTGTT AAGAACCTACGTATCTGTGAGGATTGTCATTCGTCCATCAAACTCATCTCCAAAGTTTAC AAGAGAAAAATAACGGTACGAGACCGGAAACGTTTTCACCATTTCCAAGATGGCTCATGC TCGTGTATGGATTATTGGTGA

Peptide Sequence

PEP ID	AT5G48910.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:19832969-19834909 REVERSE LENGTH=646 \| 201606
Sequence	MNPTQTLFSPGGNSPASSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAE ILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMS DEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMK DARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVV SWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA EDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAI DCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDL LGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAY VALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEIN SMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIV KNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW

Transcript Sequence

Transcript ID	AT5G48910.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:19832785-19835148 REVERSE LENGTH=2364 \| 201606
Sequence	GTTCTAACTATCTTTAGATATGACAACAAAACGGTTCAGAGTTGCCGAACCGAACCGATC CAAAGACCGAAATTCCAAAATAATTTCGCCGATCGGTTAACTCCTCCTTGCAGCTTCAGC GCCGATAACTGAATAAATCGGTTTATTCGGTTCGGTTTAATCGGTTTTCGACCACAATCT TTATTATATCTTGTTATGCGTCTTACATAGCCACACGTAGGAATCTTTGTTGATTCTCAA TGAACCCAACACAGACACTTTTCTCTCCCGGCGGTAACTCGCCGGCGTCTTCTCCGGCGA GTCATCCATCTTCACTCTTTCCTCAAATCAACAACTGTCGAACTATAAGAGACCTCTCTC AAATCCATGCCGTTTTCATTAAATCTGGTCAAATGCGAGACACTCTCGCCGCCGCAGAGA TTCTCCGATTCTGTGCTACCTCCGATCTCCACCACCGTGACCTTGACTACGCACATAAGA TCTTTAATCAAATGCCTCAACGAAATTGCTTCTCTTGGAATACTATAATCAGAGGTTTCA GTGAGAGTGACGAAGACAAAGCTCTGATCGCAATCACATTATTCTACGAGATGATGAGTG ATGAGTTTGTTGAACCGAATCGGTTTACGTTTCCCTCTGTTCTTAAGGCTTGTGCGAAAA CTGGGAAGATTCAAGAAGGTAAGCAGATTCATGGTTTGGCTTTGAAGTATGGATTTGGTG GTGATGAATTTGTGATGAGTAATCTTGTTAGAATGTATGTGATGTGTGGTTTTATGAAAG ATGCTCGTGTGTTGTTTTATAAGAACATTATAGAGAAAGATATGGTGGTGATGACTGATA GAAGAAAGAGAGATGGTGAAATAGTTTTGTGGAATGTTATGATTGATGGTTATATGAGAC TTGGTGATTGTAAAGCTGCACGGATGTTGTTTGATAAAATGCGTCAAAGAAGCGTTGTTT CGTGGAATACGATGATATCGGGTTATTCGCTGAACGGGTTTTTCAAAGATGCTGTTGAGG TTTTTCGTGAGATGAAGAAAGGGGATATTAGACCGAATTATGTTACTTTGGTTAGTGTTC TTCCTGCTATTTCACGGCTTGGGTCTTTAGAGTTGGGAGAATGGTTGCATTTGTATGCAG AGGATAGTGGAATTAGGATTGATGATGTGCTTGGCTCTGCTTTGATTGATATGTATTCGA AATGTGGGATCATTGAGAAAGCGATTCATGTATTTGAGAGGTTACCTAGAGAGAACGTGA TTACTTGGAGTGCGATGATTAACGGGTTTGCTATACATGGCCAGGCAGGTGATGCTATTG ACTGTTTTTGTAAAATGAGGCAGGCTGGAGTTCGACCTAGTGATGTTGCCTACATTAATC TTTTGACTGCTTGTAGCCATGGCGGGTTGGTAGAAGAAGGAAGGAGATATTTCAGTCAGA TGGTGAGTGTGGATGGTTTAGAGCCTAGGATTGAACACTACGGGTGTATGGTTGATTTAT TGGGTCGTTCGGGTCTTCTTGATGAGGCTGAGGAGTTTATACTTAATATGCCTATAAAAC CAGATGATGTGATATGGAAAGCACTTTTGGGTGCTTGCAGAATGCAGGGAAATGTCGAGA TGGGCAAGCGCGTTGCCAATATTCTGATGGATATGGTTCCTCATGACAGTGGAGCTTATG TCGCCCTCTCAAACATGTATGCTTCTCAAGGAAACTGGTCAGAGGTTTCAGAGATGAGGC TGAGAATGAAGGAGAAGGATATAAGAAAAGACCCTGGGTGTAGTTTGATCGACATTGATG GCGTGCTTCATGAGTTTGTTGTGGAAGATGATTCACACCCAAAAGCCAAAGAAATCAACT CAATGCTCGTAGAAATCTCAGACAAACTGAGACTAGCTGGGTATAGACCAATCACCACAC AGGTTTTGTTAAACTTGGAGGAAGAAGATAAAGAAAATGTACTTCATTACCACAGCGAGA AGATCGCTACAGCGTTTGGGTTGATAAGCACGAGCCCTGGCAAACCAATACGCATTGTTA AGAACCTACGTATCTGTGAGGATTGTCATTCGTCCATCAAACTCATCTCCAAAGTTTACA AGAGAAAAATAACGGTACGAGACCGGAAACGTTTTCACCATTTCCAAGATGGCTCATGCT CGTGTATGGATTATTGGTGAAACTAAACATAAAGACGGAAGACTCTTTCCCTGTGTATAC ACAAGCTCTGTTGTTTCTTTACTGACTCCACATTTATAAGAATTGAATCTTTTATTCAGT AGTTTAGAAATGTGATAAAATAAAAATCTTGATGAATTGTAATATAAAAGGTAAATGATG AATTATGTCTCAAAGTTTTTATTC