Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G48800.1
CDS Infomation	\| Phototropic-responsive NPH3 family protein \| Chr5:19786881-19789003 FORWARD LENGTH=1845 \| 201606
Sequence	ATGGACAAGCATCATCATCAACATCTTTTATTACAGCATCATCAACATCTTCACCATCAT CAGAAGCTCTCTCTTGCCAAATCATCCAGACAAAGCTGTAGTGAATGGATCTTTCGAGAT GTTCCAAGTGATATAACCATAGAAGTAAACGGTGGAAACTTTGCTCTGCATAAGTTCCCT TTAGTCTCTAGAAGTGGAAGAATCCGAAGAATAGTTGCAGAACATAGAGATTCAGATATC TCCAAAGTGGAGCTTCTTAATCTCCCAGGAGGAGCAGAGACATTCGAACTAGCAGCAAAA TTCTGCTATGGGATTAACTTCGAGATCACTTCTTCGAACGTTGCACAGCTCTTTTGTGTC TCTGATTACCTCGAGATGACGGAAGAGTACTCCAAAGATAACTTGGCTTCAAGAACAGAG GAGTATCTTGAGAGCATCGTATGCAAGAATCTTGAGATGTGTGTTCAAGTCTTGAAACAA TCCGAGATTCTTCTCCCTCTTGCAGATGAACTGAATATCATAGGTAGATGTATCGATGCC ATTGCCTCGAAGGCTTGCGCTGAGCAGATCGCTTCAAGCTTTTCGAGGTTGGAGTATAGT AGCTCAGGGAGGCTTCATATGAGCAGACAAGTGAAAAGCAGTGGTGATGGAGGAGATTGG TGGATCGAAGATCTTTCGGTTCTGAGGATTGATTTGTATCAGAGAGTTATGAATGCAATG AAGTGTCGTGGTGTACGTCCAGAAAGTATAGGAGCTTCTTTGGTTAGTTACGCTGAGAGA GAGCTAACAAAGAGATCTGAACATGAACAAACCATTGTTGAGACAATTGTTACGCTTTTG CCAGTCGAAAACCTCGTGGTTCCGATCAGTTTCCTATTCGGGTTACTGAGAAGAGCAGTG ATTCTTGATACTTCAGTTTCCTGCAGGCTTGATCTTGAGAGGAGGTTAGGTTCTCAGCTC GATATGGCGACTCTTGACGATCTCTTGATCCCGTCTTTTCGTCATGCAGGAGACACTTTG TTCGACATTGACACGGTTCACAGAATCTTAGTGAATTTCTCACAGCAAGGAGGAGATGAT AGTGAGGATGAAGAGTCTGTGTTTGAATGCGATAGTCCACATTCGCCTTCACAAACCGCC ATGTTTAAAGTTGCAAAGCTTGTAGACAGTTATCTTGCTGAGATAGCTCCCGATGCTAAC CTTGACCTTTCTAAGTTCTTGCTTATCGCAGAAGCCTTACCGCCTCATGCTCGCACCCTT CACGATGGTTTATACCGCGCCATTGATCTCTATCTTAAGGCACATCAAGGGTTATCAGAT TCAGACAAGAAGAAACTATCAAAACTTATTGACTTCCAGAAACTCTCACAAGAAGCTGGA GCACACGCTGCACAAAACGAGCGGCTTCCTCTGCAATCCATAGTTCAAGTTCTCTACTTT GAGCAACTCAAGCTTCGAAGCTCCTTGTGCTCTTCTTACTCAGACGAAGAGCCAAAGCCA AAGCAGCAACAACAGCAGTCATGGAGAATCAATAGCGGAGCTCTCAGTGCAACAATGTCC CCCAAAGACAACTATGCGTCTCTGAGGAGAGAAAACCGAGAACTGAAGCTCGAGTTAGCT AGGTTGAGAATGAGACTCAACGACCTAGAGAAAGAACATATATGTATGAAGAGAGATATG CAGAGGTCTCATTCGCGCAAATTCATGAGCAGTTTCTCAAAGAAAATGGGGAAACTTAGC TTCTTTGGGCATAGCTCTTCAAGAGGATCAAGCTCTCCATCAAAGCAGTCTTTCAGAACA GATTCAAAGGTACTGATGGAGAGAACTTGCGCAAGCACAGATTAG

Peptide Sequence

PEP ID	AT5G48800.1
PEP Infomation	\| Phototropic-responsive NPH3 family protein \| Chr5:19786881-19789003 FORWARD LENGTH=614 \| 201606
Sequence	MDKHHHQHLLLQHHQHLHHHQKLSLAKSSRQSCSEWIFRDVPSDITIEVNGGNFALHKFP LVSRSGRIRRIVAEHRDSDISKVELLNLPGGAETFELAAKFCYGINFEITSSNVAQLFCV SDYLEMTEEYSKDNLASRTEEYLESIVCKNLEMCVQVLKQSEILLPLADELNIIGRCIDA IASKACAEQIASSFSRLEYSSSGRLHMSRQVKSSGDGGDWWIEDLSVLRIDLYQRVMNAM KCRGVRPESIGASLVSYAERELTKRSEHEQTIVETIVTLLPVENLVVPISFLFGLLRRAV ILDTSVSCRLDLERRLGSQLDMATLDDLLIPSFRHAGDTLFDIDTVHRILVNFSQQGGDD SEDEESVFECDSPHSPSQTAMFKVAKLVDSYLAEIAPDANLDLSKFLLIAEALPPHARTL HDGLYRAIDLYLKAHQGLSDSDKKKLSKLIDFQKLSQEAGAHAAQNERLPLQSIVQVLYF EQLKLRSSLCSSYSDEEPKPKQQQQQSWRINSGALSATMSPKDNYASLRRENRELKLELA RLRMRLNDLEKEHICMKRDMQRSHSRKFMSSFSKKMGKLSFFGHSSSRGSSSPSKQSFRT DSKVLMERTCASTD

Transcript Sequence

Transcript ID	AT5G48800.1
Transcript Infomation	\| Phototropic-responsive NPH3 family protein \| Chr5:19786465-19789129 FORWARD LENGTH=2387 \| 201606
Sequence	CTTGTCGACTTTCACTCTTCACTAGCTACCATTGTTAACTTTTGGTTCTTAATTCATATT TTCTGCTCCAACTTTGTAGAGAATCTTTTGTTATCCCAAAGAAAAAGGTGCCTAAATTCA CGTTTGACAATGTTGCTTGAAAAAGGTTTGATCTTGAAATTTCAAAAGAGGGAAAAAAGT AAAGGAGAAAAATTTGGAGAGACAAGAAGTGAGTCAAGGGACCCAACAACAAAGACAAAG ACAAAAACTTTGGATTTTGCCAAATACTATGATTAATGCTCATTCAACACTACTATTACC ATTTCCATCATCATCATCTCTCTCTCTCTCTCTGGTTTTGGAAAACTGCCTGAGAAAAAA CCTAGCCATAACCATCTTCTTCTTCTTTCTCTTGTTCTTGAACATAATTCTGCTTCATGG ACAAGCATCATCATCAACATCTTTTATTACAGCATCATCAACATCTTCACCATCATCAGA AGCTCTCTCTTGCCAAATCATCCAGACAAAGCTGTAGTGAATGGATCTTTCGAGATGTTC CAAGTGATATAACCATAGAAGTAAACGGTGGAAACTTTGCTCTGCATAAGTTCCCTTTAG TCTCTAGAAGTGGAAGAATCCGAAGAATAGTTGCAGAACATAGAGATTCAGATATCTCCA AAGTGGAGCTTCTTAATCTCCCAGGAGGAGCAGAGACATTCGAACTAGCAGCAAAATTCT GCTATGGGATTAACTTCGAGATCACTTCTTCGAACGTTGCACAGCTCTTTTGTGTCTCTG ATTACCTCGAGATGACGGAAGAGTACTCCAAAGATAACTTGGCTTCAAGAACAGAGGAGT ATCTTGAGAGCATCGTATGCAAGAATCTTGAGATGTGTGTTCAAGTCTTGAAACAATCCG AGATTCTTCTCCCTCTTGCAGATGAACTGAATATCATAGGTAGATGTATCGATGCCATTG CCTCGAAGGCTTGCGCTGAGCAGATCGCTTCAAGCTTTTCGAGGTTGGAGTATAGTAGCT CAGGGAGGCTTCATATGAGCAGACAAGTGAAAAGCAGTGGTGATGGAGGAGATTGGTGGA TCGAAGATCTTTCGGTTCTGAGGATTGATTTGTATCAGAGAGTTATGAATGCAATGAAGT GTCGTGGTGTACGTCCAGAAAGTATAGGAGCTTCTTTGGTTAGTTACGCTGAGAGAGAGC TAACAAAGAGATCTGAACATGAACAAACCATTGTTGAGACAATTGTTACGCTTTTGCCAG TCGAAAACCTCGTGGTTCCGATCAGTTTCCTATTCGGGTTACTGAGAAGAGCAGTGATTC TTGATACTTCAGTTTCCTGCAGGCTTGATCTTGAGAGGAGGTTAGGTTCTCAGCTCGATA TGGCGACTCTTGACGATCTCTTGATCCCGTCTTTTCGTCATGCAGGAGACACTTTGTTCG ACATTGACACGGTTCACAGAATCTTAGTGAATTTCTCACAGCAAGGAGGAGATGATAGTG AGGATGAAGAGTCTGTGTTTGAATGCGATAGTCCACATTCGCCTTCACAAACCGCCATGT TTAAAGTTGCAAAGCTTGTAGACAGTTATCTTGCTGAGATAGCTCCCGATGCTAACCTTG ACCTTTCTAAGTTCTTGCTTATCGCAGAAGCCTTACCGCCTCATGCTCGCACCCTTCACG ATGGTTTATACCGCGCCATTGATCTCTATCTTAAGGCACATCAAGGGTTATCAGATTCAG ACAAGAAGAAACTATCAAAACTTATTGACTTCCAGAAACTCTCACAAGAAGCTGGAGCAC ACGCTGCACAAAACGAGCGGCTTCCTCTGCAATCCATAGTTCAAGTTCTCTACTTTGAGC AACTCAAGCTTCGAAGCTCCTTGTGCTCTTCTTACTCAGACGAAGAGCCAAAGCCAAAGC AGCAACAACAGCAGTCATGGAGAATCAATAGCGGAGCTCTCAGTGCAACAATGTCCCCCA AAGACAACTATGCGTCTCTGAGGAGAGAAAACCGAGAACTGAAGCTCGAGTTAGCTAGGT TGAGAATGAGACTCAACGACCTAGAGAAAGAACATATATGTATGAAGAGAGATATGCAGA GGTCTCATTCGCGCAAATTCATGAGCAGTTTCTCAAAGAAAATGGGGAAACTTAGCTTCT TTGGGCATAGCTCTTCAAGAGGATCAAGCTCTCCATCAAAGCAGTCTTTCAGAACAGATT CAAAGGTACTGATGGAGAGAACTTGCGCAAGCACAGATTAGCTCAGTGTTTATCATTTTC TCTTACCTGTTGCTGCTTTTTAAGTGAGACTTGAGACTGGTGTGTGAGTGATATTGTAAA TGGATTTGATTGATATAAGACAACAAAGGTAGATGGCTTAAAAATCA