Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G48600.2
CDS Infomation	\| structural maintenance of chromosome 3 \| Chr5:19701908-19709091 FORWARD LENGTH=3735 \| 201606
Sequence	ATGGAGGAAGATGAGCCAATGGGCGGCGGCGAGTCTGAGCCTGAGCAGAGGAAATCTGGA ACTCCGAGACTTTACATAAAAGAGCTTGTCATGAGAAACTTCAAATCATATGCTGGTGAA CAACGCGTCGGTCCTTTCCACAAGAGTTTTTCTGCGGTGGTTGGACCTAATGGGAGTGGA AAGAGCAATGTGATAGATGCAATGCTCTTTGTATTTGGGAAACGAGCCAAGCAGATGCGG CTGAACAAAGTTTCAGAGCTAATTCACAACTCAACTAATCACCAGAACTTGGATAGTGCT GGAGTTTCTGTACAGTTTGAAGAGATTATCGATTTGGAAAATGGATTGTACGAAACTGTT CCTGGAAGCGATTTCATGATTACTCGGGTTGCATTCCGAGATAATTCTTCCAAGTATTAT ATCAATGAGAGGTCGAGCAATTTCACTGAAGTTACCAAAAAACTCAAGGGGAAAGGAGTA GATCTTGACAACAACCGTTTCTTGATTCTTCAGGGGGAGGTAGAACAAATATCACTCATG AAGCCGAAAGCACAAGGTCCCCATGATGAAGGTTTTCTTGAATACCTCGAGGATATAATT GGAACGAATAAATATGTGGAGAAGATAGATGAATTAAATAAGCAGCTTGAAACCCTCAAT GAAAGCCGGTCTGGAGTTGTGCAAATGGTGAAATTAGCGGAGAAAGAAAGAGACAACTTA GAGGGTTTGAAGGATGAGGCAGAGACTTACATGCTGAAAGAGTTATCACATCTTAAATGG CAAGAAAAGGCTACAAAAATGGCATATGAAGATACTGTAGCGAAAATTACTGAACAGAGA GACAGCTTGCAGAATTTGGAAAATAGTCTAAAAGATGAGCGAGTGAAAATGGATGAGAGT AATGAAGAGTTAAAAAAATTTGAGTCTGTGCATGAAAAACATAAGAAGAGACAAGAGGTT CTTGATAATGAACTTAGAGCCTGTAAGGAGAAATTCAAAGAGTTTGAAAGGCAGGACGTA AAGCATAGGGAGGACTTGAAGCATGTGAAGCAAAAAATCAAGAAACTCGAGGATAAACTT GAGAAGGATTCATCCAAAATCGGTGATATGACAAAGGAGTCTGAGGACTCAAGCAATCTA ATACCGAAACTTCAGGAAAACATACCAAAGCTTCAGAAGGTCTTGCTAGATGAGGAGAAG AAATTGGAGGAAATCAAAGCGATAGCTAAAGTTGAAACTGAAGGTTACCGGTCTGAGCTT ACAAAAATTCGTGCTGAATTAGAACCTTGGGAAAAAGATCTAATTGTGCACAGGGGAAAG CTTGATGTTGCATCATCCGAAAGTGAACTCTTGAGCAAGAAGCATGAAGCTGCTCTGAAA GCCTTCACAGATGCTCAGAAACAGCTCTCTGATATATCAACGAGAAAAAAAGAAAAAGCT GCAGCAACTACCTCTTGGAAAGCTGATATAAAGAAGAAGAAACAGGAAGCAATCGAAGCT CGGAAAGTGGAAGAGGAATCACTTAAAGAACAAGAAACACTCGTTCCACAAGAACAGGCA GCCAGAGAAAAAGTTGCTGAGCTCAAATCAGCAATGAATTCTGAGAAGAGTCAGAATGAG GTTTTGAAGGCAGTTTTAAGAGCGAAGGAGAACAATCAAATTGAAGGAATATATGGAAGG ATGGGGGACTTAGGTGCCATTGATGCAAAATACGATGTCGCCATATCAACTGCGTGCGCC GGCCTTGATTACATTGTTGTTGAAACAACTTCTTCAGCACAAGCATGTGTTGAGCTGCTG CGGAAGGGAAATCTTGGCTTTGCAACATTTATGATATTGGAAAAACAAACAGATCATATA CATAAACTGAAGGAGAAAGTGAAAACACCAGAGGATGTACCACGCCTCTTTGATCTTGTC AGAGTTAAGGATGAAAGGATGAAACTTGCATTCTATGCAGCCTTGGGAAACACTGTTGTG GCAAAGGATCTTGATCAGGCAACACGTATTGCATATGGTGGGAACAGAGAATTTCGAAGA GTCGTGGCTCTTGATGGCGCTCTCTTTGAAAAATCTGGTACCATGAGTGGAGGGGGAGGC AAGGCACGTGGTGGAAGAATGGGAACCTCTATTCGAGCCACTGGTGTGTCTGGTGAAGCT GTTGCTAATGCAGAAAATGAGCTCTCCAAAATTGTTGACATGTTAAACAACATCCGTGAA AAGGTTGGAAATGCTGTGAGACAGTATCGAGCTGCAGAAAACGAAGTCTCTGGCCTAGAG ATGGAACTGGCGAAAAGCCAAAGAGAGATTGAAAGTCTCAATTCAGAGCATAATTATCTG GAAAAACAACTAGCTTCCCTGGAAGCCGCATCTCAACCAAAGACAGATGAGATTGACAGG CTTAAAGAGCTCAAGAAAATAATCTCTAAAGAAGAAAAAGAGATTGAAAACCTTGAGAAG GGTTCTAAACAGCTGAAGGATAAAGCTTTGGAGCTGCAAACCAACATAGAGAACGCTGGT GGTGAAAAATTAAAAGGACAAAAGGCAAAGGTTGAGAAGATTCAGACTGATATCGACAAA AACAATACAGAGATCAATCGGTGTAATGTTCAAATAGAAACAAACCAGAAACTGATAAAG AAGTTGACAAAGGGGATTGAAGAGGCTACTCGAGAAAAAGAGAGGCTAGAGGGTGAGAAG GAAAATTTGCATGTGACTTTCAAAGATATAACGCAGAAAGCATTCGAGATCCAAGAGACG TATAAGAAAACACAGCAGTTGATTGATGAGCACAAAGACGTGTTGACTGGAGCAAAGTCC GATTATGAGAACCTGAAAAAGTCTGTGGATGAGTTGAAGGCATCTAGGGTAGATGCAGAA TTCAAAGTCCAAGATATGAAAAAGAAATACAATGAATTAGAAATGAGAGAGAAGGGTTAC AAGAAGAAACTCAATGACTTGCAGATTGCATTCACAAAGCATATGGAACAAATTCAGAAA GATCTTGTTGATCCGGATAAGCTTCAAGCAACATTGATGGATAATAATTTGAATGAAGCT TGTGATCTGAAAAGGGCTCTTGAAATGGTTGCCTTACTGGAGGCTCAGCTGAAAGAGTTG AATCCAAATCTTGACTCAATCGCCGAGTACCGGAGCAAAGTGGAACTTTACAACGGACGG GTAGACGAACTTAACTCTGTGACCCAAGAACGTGATGACACAAGGAAGCAGTATGATGAA TTGAGAAAAAGAAGGTTGGATGAGTTTATGGCAGGGTTTAACACTATATCCTTAAAGCTC AAAGAAATGTATCAGATGATCACTCTGGGAGGTGATGCAGAGCTGGAGCTGGTAGACTCG CTGGACCCTTTCTCAGAAGGTGTGGTATTCAGTGTAAGACCTCCCAAGAAGAGCTGGAAG AACATTGCAAACTTGTCGGGTGGTGAAAAGACACTCAGCTCACTCGCACTAGTCTTTGCA CTCCATCACTACAAGCCTACTCCACTTTACGTCATGGACGAAATCGACGCTGCTCTCGAC TTCAAAAACGTATCAATCGTTGGACATTACGTGAAAGACCGGACTAAAGATGCTCAGTTC ATTATCATCAGTTTGAGGAACAACATGTTTGAGCTAGCAGATAGATTGGTGGGAATCTAC AAAACAGATAACTGTACGAAGAGCATTACGATCAATCCTGGAAGTTTTGCAGTTTGTCAG AAAACTCCTGCTTAG

Peptide Sequence

PEP ID	AT5G48600.2
PEP Infomation	\| structural maintenance of chromosome 3 \| Chr5:19701908-19709091 FORWARD LENGTH=1244 \| 201606
Sequence	MEEDEPMGGGESEPEQRKSGTPRLYIKELVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSG KSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVQFEEIIDLENGLYETV PGSDFMITRVAFRDNSSKYYINERSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLM KPKAQGPHDEGFLEYLEDIIGTNKYVEKIDELNKQLETLNESRSGVVQMVKLAEKERDNL EGLKDEAETYMLKELSHLKWQEKATKMAYEDTVAKITEQRDSLQNLENSLKDERVKMDES NEELKKFESVHEKHKKRQEVLDNELRACKEKFKEFERQDVKHREDLKHVKQKIKKLEDKL EKDSSKIGDMTKESEDSSNLIPKLQENIPKLQKVLLDEEKKLEEIKAIAKVETEGYRSEL TKIRAELEPWEKDLIVHRGKLDVASSESELLSKKHEAALKAFTDAQKQLSDISTRKKEKA AATTSWKADIKKKKQEAIEARKVEEESLKEQETLVPQEQAAREKVAELKSAMNSEKSQNE VLKAVLRAKENNQIEGIYGRMGDLGAIDAKYDVAISTACAGLDYIVVETTSSAQACVELL RKGNLGFATFMILEKQTDHIHKLKEKVKTPEDVPRLFDLVRVKDERMKLAFYAALGNTVV AKDLDQATRIAYGGNREFRRVVALDGALFEKSGTMSGGGGKARGGRMGTSIRATGVSGEA VANAENELSKIVDMLNNIREKVGNAVRQYRAAENEVSGLEMELAKSQREIESLNSEHNYL EKQLASLEAASQPKTDEIDRLKELKKIISKEEKEIENLEKGSKQLKDKALELQTNIENAG GEKLKGQKAKVEKIQTDIDKNNTEINRCNVQIETNQKLIKKLTKGIEEATREKERLEGEK ENLHVTFKDITQKAFEIQETYKKTQQLIDEHKDVLTGAKSDYENLKKSVDELKASRVDAE FKVQDMKKKYNELEMREKGYKKKLNDLQIAFTKHMEQIQKDLVDPDKLQATLMDNNLNEA CDLKRALEMVALLEAQLKELNPNLDSIAEYRSKVELYNGRVDELNSVTQERDDTRKQYDE LRKRRLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWK NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQF IIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVCQKTPA

Transcript Sequence

Transcript ID	AT5G48600.2
Transcript Infomation	\| structural maintenance of chromosome 3 \| Chr5:19701728-19709342 FORWARD LENGTH=4166 \| 201606
Sequence	CATAAATTTTCATTTGTGACCTAAAATTAACTTTCCCTTTCTCTCTCCGTGCCTCTTCCC ATTCTCTTTCAATCTTGTTTGAATCTCCCTCGATTTTCATTTCTCTTTCAATTTCAAAAT TCGCACCTCCTCCTCCAAAGTTGTTGAAATCAGATTTTGTTGACCGGAGAGTAGTTATTT ATGGAGGAAGATGAGCCAATGGGCGGCGGCGAGTCTGAGCCTGAGCAGAGGAAATCTGGA ACTCCGAGACTTTACATAAAAGAGCTTGTCATGAGAAACTTCAAATCATATGCTGGTGAA CAACGCGTCGGTCCTTTCCACAAGAGTTTTTCTGCGGTGGTTGGACCTAATGGGAGTGGA AAGAGCAATGTGATAGATGCAATGCTCTTTGTATTTGGGAAACGAGCCAAGCAGATGCGG CTGAACAAAGTTTCAGAGCTAATTCACAACTCAACTAATCACCAGAACTTGGATAGTGCT GGAGTTTCTGTACAGTTTGAAGAGATTATCGATTTGGAAAATGGATTGTACGAAACTGTT CCTGGAAGCGATTTCATGATTACTCGGGTTGCATTCCGAGATAATTCTTCCAAGTATTAT ATCAATGAGAGGTCGAGCAATTTCACTGAAGTTACCAAAAAACTCAAGGGGAAAGGAGTA GATCTTGACAACAACCGTTTCTTGATTCTTCAGGGGGAGGTAGAACAAATATCACTCATG AAGCCGAAAGCACAAGGTCCCCATGATGAAGGTTTTCTTGAATACCTCGAGGATATAATT GGAACGAATAAATATGTGGAGAAGATAGATGAATTAAATAAGCAGCTTGAAACCCTCAAT GAAAGCCGGTCTGGAGTTGTGCAAATGGTGAAATTAGCGGAGAAAGAAAGAGACAACTTA GAGGGTTTGAAGGATGAGGCAGAGACTTACATGCTGAAAGAGTTATCACATCTTAAATGG CAAGAAAAGGCTACAAAAATGGCATATGAAGATACTGTAGCGAAAATTACTGAACAGAGA GACAGCTTGCAGAATTTGGAAAATAGTCTAAAAGATGAGCGAGTGAAAATGGATGAGAGT AATGAAGAGTTAAAAAAATTTGAGTCTGTGCATGAAAAACATAAGAAGAGACAAGAGGTT CTTGATAATGAACTTAGAGCCTGTAAGGAGAAATTCAAAGAGTTTGAAAGGCAGGACGTA AAGCATAGGGAGGACTTGAAGCATGTGAAGCAAAAAATCAAGAAACTCGAGGATAAACTT GAGAAGGATTCATCCAAAATCGGTGATATGACAAAGGAGTCTGAGGACTCAAGCAATCTA ATACCGAAACTTCAGGAAAACATACCAAAGCTTCAGAAGGTCTTGCTAGATGAGGAGAAG AAATTGGAGGAAATCAAAGCGATAGCTAAAGTTGAAACTGAAGGTTACCGGTCTGAGCTT ACAAAAATTCGTGCTGAATTAGAACCTTGGGAAAAAGATCTAATTGTGCACAGGGGAAAG CTTGATGTTGCATCATCCGAAAGTGAACTCTTGAGCAAGAAGCATGAAGCTGCTCTGAAA GCCTTCACAGATGCTCAGAAACAGCTCTCTGATATATCAACGAGAAAAAAAGAAAAAGCT GCAGCAACTACCTCTTGGAAAGCTGATATAAAGAAGAAGAAACAGGAAGCAATCGAAGCT CGGAAAGTGGAAGAGGAATCACTTAAAGAACAAGAAACACTCGTTCCACAAGAACAGGCA GCCAGAGAAAAAGTTGCTGAGCTCAAATCAGCAATGAATTCTGAGAAGAGTCAGAATGAG GTTTTGAAGGCAGTTTTAAGAGCGAAGGAGAACAATCAAATTGAAGGAATATATGGAAGG ATGGGGGACTTAGGTGCCATTGATGCAAAATACGATGTCGCCATATCAACTGCGTGCGCC GGCCTTGATTACATTGTTGTTGAAACAACTTCTTCAGCACAAGCATGTGTTGAGCTGCTG CGGAAGGGAAATCTTGGCTTTGCAACATTTATGATATTGGAAAAACAAACAGATCATATA CATAAACTGAAGGAGAAAGTGAAAACACCAGAGGATGTACCACGCCTCTTTGATCTTGTC AGAGTTAAGGATGAAAGGATGAAACTTGCATTCTATGCAGCCTTGGGAAACACTGTTGTG GCAAAGGATCTTGATCAGGCAACACGTATTGCATATGGTGGGAACAGAGAATTTCGAAGA GTCGTGGCTCTTGATGGCGCTCTCTTTGAAAAATCTGGTACCATGAGTGGAGGGGGAGGC AAGGCACGTGGTGGAAGAATGGGAACCTCTATTCGAGCCACTGGTGTGTCTGGTGAAGCT GTTGCTAATGCAGAAAATGAGCTCTCCAAAATTGTTGACATGTTAAACAACATCCGTGAA AAGGTTGGAAATGCTGTGAGACAGTATCGAGCTGCAGAAAACGAAGTCTCTGGCCTAGAG ATGGAACTGGCGAAAAGCCAAAGAGAGATTGAAAGTCTCAATTCAGAGCATAATTATCTG GAAAAACAACTAGCTTCCCTGGAAGCCGCATCTCAACCAAAGACAGATGAGATTGACAGG CTTAAAGAGCTCAAGAAAATAATCTCTAAAGAAGAAAAAGAGATTGAAAACCTTGAGAAG GGTTCTAAACAGCTGAAGGATAAAGCTTTGGAGCTGCAAACCAACATAGAGAACGCTGGT GGTGAAAAATTAAAAGGACAAAAGGCAAAGGTTGAGAAGATTCAGACTGATATCGACAAA AACAATACAGAGATCAATCGGTGTAATGTTCAAATAGAAACAAACCAGAAACTGATAAAG AAGTTGACAAAGGGGATTGAAGAGGCTACTCGAGAAAAAGAGAGGCTAGAGGGTGAGAAG GAAAATTTGCATGTGACTTTCAAAGATATAACGCAGAAAGCATTCGAGATCCAAGAGACG TATAAGAAAACACAGCAGTTGATTGATGAGCACAAAGACGTGTTGACTGGAGCAAAGTCC GATTATGAGAACCTGAAAAAGTCTGTGGATGAGTTGAAGGCATCTAGGGTAGATGCAGAA TTCAAAGTCCAAGATATGAAAAAGAAATACAATGAATTAGAAATGAGAGAGAAGGGTTAC AAGAAGAAACTCAATGACTTGCAGATTGCATTCACAAAGCATATGGAACAAATTCAGAAA GATCTTGTTGATCCGGATAAGCTTCAAGCAACATTGATGGATAATAATTTGAATGAAGCT TGTGATCTGAAAAGGGCTCTTGAAATGGTTGCCTTACTGGAGGCTCAGCTGAAAGAGTTG AATCCAAATCTTGACTCAATCGCCGAGTACCGGAGCAAAGTGGAACTTTACAACGGACGG GTAGACGAACTTAACTCTGTGACCCAAGAACGTGATGACACAAGGAAGCAGTATGATGAA TTGAGAAAAAGAAGGTTGGATGAGTTTATGGCAGGGTTTAACACTATATCCTTAAAGCTC AAAGAAATGTATCAGATGATCACTCTGGGAGGTGATGCAGAGCTGGAGCTGGTAGACTCG CTGGACCCTTTCTCAGAAGGTGTGGTATTCAGTGTAAGACCTCCCAAGAAGAGCTGGAAG AACATTGCAAACTTGTCGGGTGGTGAAAAGACACTCAGCTCACTCGCACTAGTCTTTGCA CTCCATCACTACAAGCCTACTCCACTTTACGTCATGGACGAAATCGACGCTGCTCTCGAC TTCAAAAACGTATCAATCGTTGGACATTACGTGAAAGACCGGACTAAAGATGCTCAGTTC ATTATCATCAGTTTGAGGAACAACATGTTTGAGCTAGCAGATAGATTGGTGGGAATCTAC AAAACAGATAACTGTACGAAGAGCATTACGATCAATCCTGGAAGTTTTGCAGTTTGTCAG AAAACTCCTGCTTAGTCTACCAAATGGCATCTCTACATTAACCACTTACTATTGTGTTGT ATTTGTAATTTTGGGTTTTGCTTTTTTTTATGCTGGGATTAACACTAACTATGCCGAGAG AATTAATCTACTTTTGTCTCTTGTAAGTATTGGTTATGCTAGTCTACTTTTTGACTACTG GTCAAAGTCAACTATTTGCATCTTTTTTTCTTCTTTTCAAAGCAATTTGACTTTATAACT TGATTGGAATTTGGACATGACTTGAT