Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G48570.1
CDS Infomation	\| FKBP-type peptidyl-prolyl cis-trans isomerase family protein \| Chr5:19690746-19693656 REVERSE LENGTH=1737 \| 201606
Sequence	ATGGAAGACGATTTCGACACGCAGAACCAGTTTCCGGAAGAGGAGCCAGAGGAGATGGAT ATGGATCTCCCCGACAATGACGAAGCTGACTCTGCTCCTTATCTGAAAATCGGCGAGGAA ATGGAGATCGGAAAATCAGGATTGAAGAAGAAACTTGTTAAGGAATGTGAAAAATGGGAC ACGCCTGAGAACGGTGACGAAGTTGAAGTGCATTACACTGGAACTTTGTTAGATGGTACC AAGTTTGATTCGAGCCGTGACAGAGGAACTCCTTTCAAATTTACTCTTGGCCAAGGACAT GTCATTAAAGGATGGGACTTGGGGATCAAGACAATGAAGAAAGGTGAAAATGCTATTTTC ACCATTCCTCCTGAGCTGGCATATGGTGAAACCGGTTCACCGCCGACTATACCTCCGAAC GCTACTCTTCAGTTTGATGTGGAGTTGATAGCATGGAGGAGTGTTAAGGATATATGTGGT GATGGTGGTGTGTCTAAGAAAATAATTGTGGAAGGAGAAAAATGGGAGAAGCCAAAAGAC CTTGATGAAGTTTACGTCAAGTATGAAGCTCGGCTTGAGGATGGCACCATTGTTGGAAAG TCTGATGGTGTAGAGTTTACTGTCAAGGAGGGCCATTTCTGTCCTGCGCTTTCTAAGGCT GTCAAAACCATGAAAAGAGGGGAGAAGGTTCTCCTGACTGTGAAGCCACAATATGGATTT GGGGAATTTGGAAGACCAGCTTCTGATGGTCTTCAAGCTGCAATCCCACCAAATGCAACC CTTCAGATTGACCTTGAGTTGGTTTCTTGGAAGACTGTGGTGGAAGTAACTGATGACAGG AAGGTTATTAAGAAAATACTCAAGGAAGGAGAAGGATATGAGCGTCCCAATGAAGGAGCG ATTGTCAAATTGAAGTTGATTGGTAAACTTCAAGATGGAACAACCGTGTTTGTGAAGAAA GGTCATGAAGAAGATGAGGAGCCGTTCGAGTTCAAGATTGATGAAGAACAAGTGATAGAA GGGCTTGAAAAAGCTGTGATGGGCATGAAGAAGGGTGAGGTAGCACTCATCACAATTTCA CCGGAATATGCTTTTGGTTCCTCTGAATCAAAACAGGAGCTGGCTGTAATACCGCCAAAC TCGACTGTATACTATGAGGTCGAGTTGGTATCTTTCATCAAGGAGAAAGAGTCTTGGGAT ATGAACACACAGGAAAGGATAGAAGCTGCAGGCAAGAAGAAAGAAGAAGGCAATGTGTTG TTCAAAGCTGGAAAATACGCAAGAGCTTCAAAGAGATACGAGAGGGGTGTCAAATATATA GAATATGACTCAACTTTCGACGAAGAGGAGAAAAAGAAATCAAAAGATCTCAAGATTGCC TGTAACCTGAATGATGCAGCTTGCAAGCTGAAACTGAAAGATTACAAGGAAGCAGCAAAA TTGTCCACAAAGGTGTTGGAGATGGATAGTAGGAACGTGAAGGCAATGTATAGGAGAGCA CATGCCTACTTGGAGACGGCGGATCTTGATCTGGCTGAGCTTGATATCAAGAAAGCTCTC GAAATCGATCCAGACAACAAGGAGGTGAAGATAGAATATAAGAAGTTGAAGGAGAAGGTG AAAGAGTATAACAAGAAAGATGCTAAGTTTTACAGCAACATGTTGTCGAAAATGCTTGAG CCACACAAAGGAACTCAGAAGGAAGCACAAGCGATGAGTATTGACACCAAGGCATGA

Peptide Sequence

PEP ID	AT5G48570.1
PEP Infomation	\| FKBP-type peptidyl-prolyl cis-trans isomerase family protein \| Chr5:19690746-19693656 REVERSE LENGTH=578 \| 201606
Sequence	MEDDFDTQNQFPEEEPEEMDMDLPDNDEADSAPYLKIGEEMEIGKSGLKKKLVKECEKWD TPENGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGHVIKGWDLGIKTMKKGENAIF TIPPELAYGETGSPPTIPPNATLQFDVELIAWRSVKDICGDGGVSKKIIVEGEKWEKPKD LDEVYVKYEARLEDGTIVGKSDGVEFTVKEGHFCPALSKAVKTMKRGEKVLLTVKPQYGF GEFGRPASDGLQAAIPPNATLQIDLELVSWKTVVEVTDDRKVIKKILKEGEGYERPNEGA IVKLKLIGKLQDGTTVFVKKGHEEDEEPFEFKIDEEQVIEGLEKAVMGMKKGEVALITIS PEYAFGSSESKQELAVIPPNSTVYYEVELVSFIKEKESWDMNTQERIEAAGKKKEEGNVL FKAGKYARASKRYERGVKYIEYDSTFDEEEKKKSKDLKIACNLNDAACKLKLKDYKEAAK LSTKVLEMDSRNVKAMYRRAHAYLETADLDLAELDIKKALEIDPDNKEVKIEYKKLKEKV KEYNKKDAKFYSNMLSKMLEPHKGTQKEAQAMSIDTKA

Transcript Sequence

Transcript ID	AT5G48570.1
Transcript Infomation	\| FKBP-type peptidyl-prolyl cis-trans isomerase family protein \| Chr5:19690461-19693845 REVERSE LENGTH=2211 \| 201606
Sequence	TCGGGACACATCTTTAGGCTCAAGGATTCAAATGAAAATCAGAAGTCTCTAGAAAAACCC CAAAACACTCTTTCTTCACTCCCCCTATAAATTCTCATCACAATTTCTCAAACCATCTCA TCTCTGCCAACACACTCTCTAGAATTCTCTCGTGATTATCGATTTCACTCTCTTAAATTT GATCAGAAAATGGAAGACGATTTCGACACGCAGAACCAGTTTCCGGAAGAGGAGCCAGAG GAGATGGATATGGATCTCCCCGACAATGACGAAGCTGACTCTGCTCCTTATCTGAAAATC GGCGAGGAAATGGAGATCGGAAAATCAGGATTGAAGAAGAAACTTGTTAAGGAATGTGAA AAATGGGACACGCCTGAGAACGGTGACGAAGTTGAAGTGCATTACACTGGAACTTTGTTA GATGGTACCAAGTTTGATTCGAGCCGTGACAGAGGAACTCCTTTCAAATTTACTCTTGGC CAAGGACATGTCATTAAAGGATGGGACTTGGGGATCAAGACAATGAAGAAAGGTGAAAAT GCTATTTTCACCATTCCTCCTGAGCTGGCATATGGTGAAACCGGTTCACCGCCGACTATA CCTCCGAACGCTACTCTTCAGTTTGATGTGGAGTTGATAGCATGGAGGAGTGTTAAGGAT ATATGTGGTGATGGTGGTGTGTCTAAGAAAATAATTGTGGAAGGAGAAAAATGGGAGAAG CCAAAAGACCTTGATGAAGTTTACGTCAAGTATGAAGCTCGGCTTGAGGATGGCACCATT GTTGGAAAGTCTGATGGTGTAGAGTTTACTGTCAAGGAGGGCCATTTCTGTCCTGCGCTT TCTAAGGCTGTCAAAACCATGAAAAGAGGGGAGAAGGTTCTCCTGACTGTGAAGCCACAA TATGGATTTGGGGAATTTGGAAGACCAGCTTCTGATGGTCTTCAAGCTGCAATCCCACCA AATGCAACCCTTCAGATTGACCTTGAGTTGGTTTCTTGGAAGACTGTGGTGGAAGTAACT GATGACAGGAAGGTTATTAAGAAAATACTCAAGGAAGGAGAAGGATATGAGCGTCCCAAT GAAGGAGCGATTGTCAAATTGAAGTTGATTGGTAAACTTCAAGATGGAACAACCGTGTTT GTGAAGAAAGGTCATGAAGAAGATGAGGAGCCGTTCGAGTTCAAGATTGATGAAGAACAA GTGATAGAAGGGCTTGAAAAAGCTGTGATGGGCATGAAGAAGGGTGAGGTAGCACTCATC ACAATTTCACCGGAATATGCTTTTGGTTCCTCTGAATCAAAACAGGAGCTGGCTGTAATA CCGCCAAACTCGACTGTATACTATGAGGTCGAGTTGGTATCTTTCATCAAGGAGAAAGAG TCTTGGGATATGAACACACAGGAAAGGATAGAAGCTGCAGGCAAGAAGAAAGAAGAAGGC AATGTGTTGTTCAAAGCTGGAAAATACGCAAGAGCTTCAAAGAGATACGAGAGGGGTGTC AAATATATAGAATATGACTCAACTTTCGACGAAGAGGAGAAAAAGAAATCAAAAGATCTC AAGATTGCCTGTAACCTGAATGATGCAGCTTGCAAGCTGAAACTGAAAGATTACAAGGAA GCAGCAAAATTGTCCACAAAGGTGTTGGAGATGGATAGTAGGAACGTGAAGGCAATGTAT AGGAGAGCACATGCCTACTTGGAGACGGCGGATCTTGATCTGGCTGAGCTTGATATCAAG AAAGCTCTCGAAATCGATCCAGACAACAAGGAGGTGAAGATAGAATATAAGAAGTTGAAG GAGAAGGTGAAAGAGTATAACAAGAAAGATGCTAAGTTTTACAGCAACATGTTGTCGAAA ATGCTTGAGCCACACAAAGGAACTCAGAAGGAAGCACAAGCGATGAGTATTGACACCAAG GCATGAGTCTTTGAATCACTTTAGAGAGTCGCATTGATTCCAAAAACTAAATGTGAAAAG TCTACAAATTTCTGTTTTTACTCTTTGTAATCAATCTTGGTGTGTGTTACTGTTTCAGAG TTGTTATAAAACAGACTTGTAATAAACGAGGATCTACTCCAAGTTAATGACCCCAATAGC TTGATATATCATATCTAGTAGTTATGTTCTATCTACCTATTGTTCAAAAACAAAAAAGTT CTATCTACCTAATAATATTTAAATCTAGGTTAATATAGAAACAATATTCAG