Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G48460.1
CDS Infomation	\| Actin binding Calponin homology (CH) domain-containing protein \| Chr5:19636225-19639365 REVERSE LENGTH=1965 \| 201606
Sequence	ATGTCAGGATTCGTCGGGATTTTGGTATCGGATCCATGGTTACAGAACCAATTCACGCAA GTGGAGCTTCGGAGTTTGAAATCTCACTTCACGAGCATGAAGAGAGAGAGCGGGAAGCTA ACAGTATCAGACCTCGCGTCAAGGATGGGGAAATCAAAAGTAGTTGGAGATCAGAATCTA AGCAACGAAGAACGAGCGACTTTGATCCAAAATTTTCATCCGAATTTGAATGATGAAGTC GATTTCGAGTTTTACTTAAGGATTTATCTGAATCTTCAAGCGCATGTAAACGCAATAATC GGAAGCGGTGTTAAAAACTCATCTGCGTTTCTTAAAGCAGCTACAACAACTTTGTTGCAT ACTATTAGTGATTCTGAGAAATCTTCTTATGTTGCTCATATCAATAATTATCTCTCTGGA GATGAGTTTCTAAACAAGTGCCTTCCGATTAATCCGTCTTCGAATGATCTATTCGAAGTT GCAAAAGATGGTGTTTTGCTTTGTAAGCTTATAAATGTGGCGGTTCCTGGAACAATCGAT GAACGAGCGATTAATACTAAGAGTATGCTTAATCCATGGGAGAGAAATGAAAATCATACG CTTTGTCTTAACTCTGCCAAGGCTATTGGGTGTACTGTGGTTAATATAGGAACACAAGAT ATCATTGAAGGAAGGCGTCATCTTGTGCTCGGTGTGATCTCTCAAATCATTAAGATACAA TTGCTAGCAGACCTAAACTTGAAGAAAACTCCCCAGCTGGTGGAGTTGGTCGGTGATAGC AAGGATGTGGAAGAGCTAATGAGTTTACCACCTGAGAAGATCTTATTGAGATGGATGAAT TTTCAGTTGAGAAAAACTGAATACAAGAAAACCGTCACAAACTTCTCTTCTGATGTTAAG GATGCGGAAGCTTACACTAATCTATTAAATGTCCTGGCACCAGAGCACAAGAATCCATCA CATTTAGCAGTTAAAAGCTCATTTGAGAGAGCAAAACTTGTTCTCGAACATGCAGACAAA ATGGGATGTAGGAGATACTTGACGGCGAAAGATATTGTTGAGGGTTCTCCAAATCTTAAT CTTGCTTTTGTAGCACATATATTCCAGCACAGGAACGGACTTTCAACACAAACGAAACAG ATATCTTTTCTTGAAAATCTAGCTGATGACATTCAAATTTCAAGAGAAGAAAAAGCATTC CGGTTTTGGATTAACAGCTTTGATGGTTCAGTATACATAAACAACGTGTTTGAAGATCTC AGAGATGGGTGGATACTATTGCAGACACTAGACAAAGTGTCTCCAGGCATTGTTAATTGG AAAGTATCAAGCAAGCCTCCAATCAAATTGCCATTCAAGAAAGTAGAAAACTGTAATCAA GTTGTGAAATTAGGGAAGCAGCTCAAGTTCTCTTTGGTTAACATTGCTGGAAATGACATT GTTCAAGGAAACAAGAAACTCATACTAGCATACTTATGGCAATTGATGAGATACAACATC CTGCAACTTCTTAAGAACTTGAGACTACATTCAAACGGCAAAGAGATAACAGACGCTGAT ATATTGGAATGGGCAAATGCTAAAGTGAGAAACAACGGATGCAAAACACGCATGTACAGT TTCAGGGACAAGAGCTTATCCGATGGGGTATTTTTCTTGGAGCTGCTGAGTTCAGTGCAG CCAAGATCCGTAAACTGGAGTCTTGTTACAAACGGAGTTACAGATGAAGAGAAAAAGATG AATGCAACTTATGTGATTAGCATAGCCAGGAAACTTGGTTGCTCCATTTTCTTACTCCCT GAAGATATAATCGAGGTGAATCAGAAGATGATGCTGACATTGACGGCGAGTATAATGTAT TGGACTCTAAAGCAACCTCTTCATCTGAATAAGCCTATCGGATCTCCTGATAGCCACAAT GGAAGTTTACTCGATGATTCTACGTCAGATTCCTCTATAGAATAA

Peptide Sequence

PEP ID	AT5G48460.1
PEP Infomation	\| Actin binding Calponin homology (CH) domain-containing protein \| Chr5:19636225-19639365 REVERSE LENGTH=654 \| 201606
Sequence	MSGFVGILVSDPWLQNQFTQVELRSLKSHFTSMKRESGKLTVSDLASRMGKSKVVGDQNL SNEERATLIQNFHPNLNDEVDFEFYLRIYLNLQAHVNAIIGSGVKNSSAFLKAATTTLLH TISDSEKSSYVAHINNYLSGDEFLNKCLPINPSSNDLFEVAKDGVLLCKLINVAVPGTID ERAINTKSMLNPWERNENHTLCLNSAKAIGCTVVNIGTQDIIEGRRHLVLGVISQIIKIQ LLADLNLKKTPQLVELVGDSKDVEELMSLPPEKILLRWMNFQLRKTEYKKTVTNFSSDVK DAEAYTNLLNVLAPEHKNPSHLAVKSSFERAKLVLEHADKMGCRRYLTAKDIVEGSPNLN LAFVAHIFQHRNGLSTQTKQISFLENLADDIQISREEKAFRFWINSFDGSVYINNVFEDL RDGWILLQTLDKVSPGIVNWKVSSKPPIKLPFKKVENCNQVVKLGKQLKFSLVNIAGNDI VQGNKKLILAYLWQLMRYNILQLLKNLRLHSNGKEITDADILEWANAKVRNNGCKTRMYS FRDKSLSDGVFFLELLSSVQPRSVNWSLVTNGVTDEEKKMNATYVISIARKLGCSIFLLP EDIIEVNQKMMLTLTASIMYWTLKQPLHLNKPIGSPDSHNGSLLDDSTSDSSIE

Transcript Sequence

Transcript ID	AT5G48460.1
Transcript Infomation	\| Actin binding Calponin homology (CH) domain-containing protein \| Chr5:19636045-19639529 REVERSE LENGTH=2309 \| 201606
Sequence	AAAAAGTTGATTGCGAAATTTAAAATCGAAAAAGCTAAAAGGGGTAGTTTCGTCATAAAT TTGAATTTTTTCTTTCACTGCCAGCTCTGCTTTAGAGCTTCTCTACTTCTTCTTCTTCTT CAAGTTCGCTTAAGAGATCGATCGGAGATTCGGAGTAGAGAAAAATGTCAGGATTCGTCG GGATTTTGGTATCGGATCCATGGTTACAGAACCAATTCACGCAAGTGGAGCTTCGGAGTT TGAAATCTCACTTCACGAGCATGAAGAGAGAGAGCGGGAAGCTAACAGTATCAGACCTCG CGTCAAGGATGGGGAAATCAAAAGTAGTTGGAGATCAGAATCTAAGCAACGAAGAACGAG CGACTTTGATCCAAAATTTTCATCCGAATTTGAATGATGAAGTCGATTTCGAGTTTTACT TAAGGATTTATCTGAATCTTCAAGCGCATGTAAACGCAATAATCGGAAGCGGTGTTAAAA ACTCATCTGCGTTTCTTAAAGCAGCTACAACAACTTTGTTGCATACTATTAGTGATTCTG AGAAATCTTCTTATGTTGCTCATATCAATAATTATCTCTCTGGAGATGAGTTTCTAAACA AGTGCCTTCCGATTAATCCGTCTTCGAATGATCTATTCGAAGTTGCAAAAGATGGTGTTT TGCTTTGTAAGCTTATAAATGTGGCGGTTCCTGGAACAATCGATGAACGAGCGATTAATA CTAAGAGTATGCTTAATCCATGGGAGAGAAATGAAAATCATACGCTTTGTCTTAACTCTG CCAAGGCTATTGGGTGTACTGTGGTTAATATAGGAACACAAGATATCATTGAAGGAAGGC GTCATCTTGTGCTCGGTGTGATCTCTCAAATCATTAAGATACAATTGCTAGCAGACCTAA ACTTGAAGAAAACTCCCCAGCTGGTGGAGTTGGTCGGTGATAGCAAGGATGTGGAAGAGC TAATGAGTTTACCACCTGAGAAGATCTTATTGAGATGGATGAATTTTCAGTTGAGAAAAA CTGAATACAAGAAAACCGTCACAAACTTCTCTTCTGATGTTAAGGATGCGGAAGCTTACA CTAATCTATTAAATGTCCTGGCACCAGAGCACAAGAATCCATCACATTTAGCAGTTAAAA GCTCATTTGAGAGAGCAAAACTTGTTCTCGAACATGCAGACAAAATGGGATGTAGGAGAT ACTTGACGGCGAAAGATATTGTTGAGGGTTCTCCAAATCTTAATCTTGCTTTTGTAGCAC ATATATTCCAGCACAGGAACGGACTTTCAACACAAACGAAACAGATATCTTTTCTTGAAA ATCTAGCTGATGACATTCAAATTTCAAGAGAAGAAAAAGCATTCCGGTTTTGGATTAACA GCTTTGATGGTTCAGTATACATAAACAACGTGTTTGAAGATCTCAGAGATGGGTGGATAC TATTGCAGACACTAGACAAAGTGTCTCCAGGCATTGTTAATTGGAAAGTATCAAGCAAGC CTCCAATCAAATTGCCATTCAAGAAAGTAGAAAACTGTAATCAAGTTGTGAAATTAGGGA AGCAGCTCAAGTTCTCTTTGGTTAACATTGCTGGAAATGACATTGTTCAAGGAAACAAGA AACTCATACTAGCATACTTATGGCAATTGATGAGATACAACATCCTGCAACTTCTTAAGA ACTTGAGACTACATTCAAACGGCAAAGAGATAACAGACGCTGATATATTGGAATGGGCAA ATGCTAAAGTGAGAAACAACGGATGCAAAACACGCATGTACAGTTTCAGGGACAAGAGCT TATCCGATGGGGTATTTTTCTTGGAGCTGCTGAGTTCAGTGCAGCCAAGATCCGTAAACT GGAGTCTTGTTACAAACGGAGTTACAGATGAAGAGAAAAAGATGAATGCAACTTATGTGA TTAGCATAGCCAGGAAACTTGGTTGCTCCATTTTCTTACTCCCTGAAGATATAATCGAGG TGAATCAGAAGATGATGCTGACATTGACGGCGAGTATAATGTATTGGACTCTAAAGCAAC CTCTTCATCTGAATAAGCCTATCGGATCTCCTGATAGCCACAATGGAAGTTTACTCGATG ATTCTACGTCAGATTCCTCTATAGAATAAAATTGTTTTACTGTGAAATTATATATTCTTA AGAACTTTATATGAATGATGTTATTAATTATTTTGCTCCTTTGTATTTTTTGGGTGTAAA AACTATATTAAAATTGAAATGTCATCAACGAATATTGACATACATCCAATCCAACTACGG AATAATACACTCGCGGTGTCGCAAAGGTG