Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G48390.1
CDS Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr5:19612078-19615363 FORWARD LENGTH=2811 \| 201606
Sequence	ATGAGAATCGCCGAGATCACCACGCCGGACCTCCGGTTACATCACCGGGAAACCGATTCA CACACTCACCATCCTCTTCTCTCCGAGATCGAGCTCTTAATCCAACAATCTGAAGCCATT TCCAAAGATCAGCCGCTACCTCAATCTCTCCCTATTTCTCTTAGACAATTCCTAACTCGG CTGAGTCAACTTGCTCCTTTTCCCGATAACTCCTTCAAGCTTACCATATGGAAACTCAGC TTTCGCCTCTGGAATGCTTGTGTTGATCTCGCTAACGCCGCCTCTCTCCAATCCTCTTTA ACCTCCGCCGAGAACATTGCGAATCTCAGACATGTTGCCGCCGATATGCTTTTTCTCGCT AAGGACGTTACCGGTGTTCCATCTCCGACGATTAAGTCCTCTCTATTCTACTATAAGACC GGTCTTGTTTATCACAGTCTCAAGAAATTCGATCTCGCCTCCGATTGCTTCGAGAGAGCC ACCGAAATCGTCTCGAAAATTGATATCGCGAAAATTTCCGATGCCGGAGAAAAGAAATTG TTTCTGGATCTAAACCTAGCTAGATCTCGAACTGCCTGGGAAATTTCTGATAGGAATTTA GCTGTAACGTTGCTTAATCGGGCGAAGAATTTGTTGTTTGGTTCACCGGATCACTACAAA TCGCTCTCAAATCAATTCCTTGCGTTTGGTAAAAGCTCTTTGTCTAGAGGTGACGACGAT TGCAGTCTAAACGACGCTCTTAGGTTAATGAATGAAGCGTTGGATCTTTGTGAGAAGGGA TTAGGTACAGCAAAAACTCGGGAAGATACTACGGAGTTCACGGCCATGAGAATCAAAACT CTGCGTTTCATATCAGCAGTGCATTTGCAGAAGGGAGAGTTCGAGAATGTGATAAAATGT GTGAAAGTTCTAAGGAATGGAGGAAATGGTAGTGATGGAGCTGATCAACATGCTTCATTA CCTGTGTTGGCGATGAAGGCTTGGTTAGGACTTGGGAGGCATAGTGAGGCAGAGAAGGAG CTGAGAGGTATGGTGGGAAACAATGATATTCCAGAGGCAGTGTGGGTATCTGCTGTGGAA GCATATTTTGAGGTGGTTGGGACTGCTGGAGCAGAAACTGCAAAGGGTGTGTTCTTAGGT CTGCTGGGAAGGTGTCATGTCAGTGCAAAGGCGGCACTTAGAGTGGCTCATCGGGTGCTT GGTGAGAGTAGGGGAGGTGATAATGGTTCGAGAATTAGGGCGAACGTTGTGGCTCAGCTC GTGTCAGATGAGAGAGTTGTTGCTCTCTTTGCTAGTGAAGCTGTGACTAAGGAGAGGAAG GCAATACATTCTGTTCTCTGGAACAGTGCTTCAGATCATTTCCGTGCTAAAGATTATGAG ACAAGTGCAGAGATGTTTGAGAAATCAATGCTCTATATTCCACATGATATAGAAAATAGA GTTTTCAGGGCCAAAGGCTTCAGGGTTTTGTGTCTTTGCTACCTTGGGCTCTCTCAGCTG GATCGAGCTCTTGAATACATAGAAGAAGCTGAAAAGCTTGAGCCCAATATTGCTTGCTCC TTTCTTAAGTTCAAGATCTACCTGCAAAAGAAGGAACACAGTTGTGCCATTGGTCAGATC GATGCAATGACGTCCTGCCTTGATTTTTCTCCAGATTATCTTTCCCTTTCAGCGCATGAA GCTATTTCTTGCCAAGCGCTTCCAGTTGCTGTTGCTTCTCTTTCCAAGTTTCTCAGTTTC TATATCTCAGGAAAAAAAATGCCAACCACAGAGGTTGTGGTCTTCCGTACCTTAGTCACT ATATTGACTCAAGACATTGGCAGCGAAACCGAAGCTCTTAACTTTATGTTGCAAGCTCAG AGCAGGGCTTCTAAGCTTGGGACAGAGTGTTTCTTTGGATTAGGAGAGACTGGAAAGCGA GAACAGAATTGGTTTGCTGCGACTTGCTGGAATCTTGGGTCAAGGTGTGGGAAGGAAAAG AAGTATGAGCTCTGTGGTGAATTCTTGAGGCTGGCATCTGAATTTTATGGCTATATAGAT ACTGATGAGTCTGGAGAAGACAAACTGATGATTTGCAGGTCCATAATACTAAGTGTCACC GCTATGATTGCTTTGGAGAAGCAAACCAAGAGCGCACTGACTGAAACCCAAGTGAAACTT GCTGCAGAATTGCTCGTGAGAGCAGGAAAGATTATGTCTTCTTCGCTCTCAGATGGTAAA GATTGTATCATGGAGCCAGAACTCATCTTTATGTACACTTTACTTGCGTATGACATACAC GGAAGGCTCAACAATTCGGCATTCCAGTTACTTGTGGTAAAGACGTTTGCTGGTTCCAAG TCTTGTCATTACAACTATCTTCTCCAACTTGGAATTTTCGCCTCTCAAAGCCCTCAGTCC AACCCGGACGTGTCAACATTTGCTCTTAACGAATGCCTATCCGCTCTGATCGCATCTGCT TCACCAGAGTACCCAACCATAGCTCTTATAATCAGGAAGCTGATCTCCATAGCCAGCGTC CACAAAGGCGATACAGACGATGAAGAAGCAATCTTAAAGATGTACAAACAAGCATACAGA ATCATGGTTGGGTTGAAGGAAGGGGAATACCCGACTGAAGAAGGGAAATGGCTCGCAATG ACAGCTTGGAACCGAGCAGCGTTGCCCGTGAGGCTAGGACAGTTTGAGACCGCTAAAAAA TGGCTGAGCATCGGGTTGGAAATCGCTGATAAGGTTACAGGTATGGATACTTATAAAGCT TGTATGCAGGATTACTTGGCTGGTTTTCAGACCAAAGTTTCTTCTGCTTAG

Peptide Sequence

PEP ID	AT5G48390.1
PEP Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr5:19612078-19615363 FORWARD LENGTH=936 \| 201606
Sequence	MRIAEITTPDLRLHHRETDSHTHHPLLSEIELLIQQSEAISKDQPLPQSLPISLRQFLTR LSQLAPFPDNSFKLTIWKLSFRLWNACVDLANAASLQSSLTSAENIANLRHVAADMLFLA KDVTGVPSPTIKSSLFYYKTGLVYHSLKKFDLASDCFERATEIVSKIDIAKISDAGEKKL FLDLNLARSRTAWEISDRNLAVTLLNRAKNLLFGSPDHYKSLSNQFLAFGKSSLSRGDDD CSLNDALRLMNEALDLCEKGLGTAKTREDTTEFTAMRIKTLRFISAVHLQKGEFENVIKC VKVLRNGGNGSDGADQHASLPVLAMKAWLGLGRHSEAEKELRGMVGNNDIPEAVWVSAVE AYFEVVGTAGAETAKGVFLGLLGRCHVSAKAALRVAHRVLGESRGGDNGSRIRANVVAQL VSDERVVALFASEAVTKERKAIHSVLWNSASDHFRAKDYETSAEMFEKSMLYIPHDIENR VFRAKGFRVLCLCYLGLSQLDRALEYIEEAEKLEPNIACSFLKFKIYLQKKEHSCAIGQI DAMTSCLDFSPDYLSLSAHEAISCQALPVAVASLSKFLSFYISGKKMPTTEVVVFRTLVT ILTQDIGSETEALNFMLQAQSRASKLGTECFFGLGETGKREQNWFAATCWNLGSRCGKEK KYELCGEFLRLASEFYGYIDTDESGEDKLMICRSIILSVTAMIALEKQTKSALTETQVKL AAELLVRAGKIMSSSLSDGKDCIMEPELIFMYTLLAYDIHGRLNNSAFQLLVVKTFAGSK SCHYNYLLQLGIFASQSPQSNPDVSTFALNECLSALIASASPEYPTIALIIRKLISIASV HKGDTDDEEAILKMYKQAYRIMVGLKEGEYPTEEGKWLAMTAWNRAALPVRLGQFETAKK WLSIGLEIADKVTGMDTYKACMQDYLAGFQTKVSSA

Transcript Sequence

Transcript ID	AT5G48390.1
Transcript Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr5:19612020-19615383 FORWARD LENGTH=2889 \| 201606
Sequence	AGACTCGGTCCTTCGAAATTCCCAATTCTCTCTCTGAAATCTCCCGCCAACAATCGAAAT GAGAATCGCCGAGATCACCACGCCGGACCTCCGGTTACATCACCGGGAAACCGATTCACA CACTCACCATCCTCTTCTCTCCGAGATCGAGCTCTTAATCCAACAATCTGAAGCCATTTC CAAAGATCAGCCGCTACCTCAATCTCTCCCTATTTCTCTTAGACAATTCCTAACTCGGCT GAGTCAACTTGCTCCTTTTCCCGATAACTCCTTCAAGCTTACCATATGGAAACTCAGCTT TCGCCTCTGGAATGCTTGTGTTGATCTCGCTAACGCCGCCTCTCTCCAATCCTCTTTAAC CTCCGCCGAGAACATTGCGAATCTCAGACATGTTGCCGCCGATATGCTTTTTCTCGCTAA GGACGTTACCGGTGTTCCATCTCCGACGATTAAGTCCTCTCTATTCTACTATAAGACCGG TCTTGTTTATCACAGTCTCAAGAAATTCGATCTCGCCTCCGATTGCTTCGAGAGAGCCAC CGAAATCGTCTCGAAAATTGATATCGCGAAAATTTCCGATGCCGGAGAAAAGAAATTGTT TCTGGATCTAAACCTAGCTAGATCTCGAACTGCCTGGGAAATTTCTGATAGGAATTTAGC TGTAACGTTGCTTAATCGGGCGAAGAATTTGTTGTTTGGTTCACCGGATCACTACAAATC GCTCTCAAATCAATTCCTTGCGTTTGGTAAAAGCTCTTTGTCTAGAGGTGACGACGATTG CAGTCTAAACGACGCTCTTAGGTTAATGAATGAAGCGTTGGATCTTTGTGAGAAGGGATT AGGTACAGCAAAAACTCGGGAAGATACTACGGAGTTCACGGCCATGAGAATCAAAACTCT GCGTTTCATATCAGCAGTGCATTTGCAGAAGGGAGAGTTCGAGAATGTGATAAAATGTGT GAAAGTTCTAAGGAATGGAGGAAATGGTAGTGATGGAGCTGATCAACATGCTTCATTACC TGTGTTGGCGATGAAGGCTTGGTTAGGACTTGGGAGGCATAGTGAGGCAGAGAAGGAGCT GAGAGGTATGGTGGGAAACAATGATATTCCAGAGGCAGTGTGGGTATCTGCTGTGGAAGC ATATTTTGAGGTGGTTGGGACTGCTGGAGCAGAAACTGCAAAGGGTGTGTTCTTAGGTCT GCTGGGAAGGTGTCATGTCAGTGCAAAGGCGGCACTTAGAGTGGCTCATCGGGTGCTTGG TGAGAGTAGGGGAGGTGATAATGGTTCGAGAATTAGGGCGAACGTTGTGGCTCAGCTCGT GTCAGATGAGAGAGTTGTTGCTCTCTTTGCTAGTGAAGCTGTGACTAAGGAGAGGAAGGC AATACATTCTGTTCTCTGGAACAGTGCTTCAGATCATTTCCGTGCTAAAGATTATGAGAC AAGTGCAGAGATGTTTGAGAAATCAATGCTCTATATTCCACATGATATAGAAAATAGAGT TTTCAGGGCCAAAGGCTTCAGGGTTTTGTGTCTTTGCTACCTTGGGCTCTCTCAGCTGGA TCGAGCTCTTGAATACATAGAAGAAGCTGAAAAGCTTGAGCCCAATATTGCTTGCTCCTT TCTTAAGTTCAAGATCTACCTGCAAAAGAAGGAACACAGTTGTGCCATTGGTCAGATCGA TGCAATGACGTCCTGCCTTGATTTTTCTCCAGATTATCTTTCCCTTTCAGCGCATGAAGC TATTTCTTGCCAAGCGCTTCCAGTTGCTGTTGCTTCTCTTTCCAAGTTTCTCAGTTTCTA TATCTCAGGAAAAAAAATGCCAACCACAGAGGTTGTGGTCTTCCGTACCTTAGTCACTAT ATTGACTCAAGACATTGGCAGCGAAACCGAAGCTCTTAACTTTATGTTGCAAGCTCAGAG CAGGGCTTCTAAGCTTGGGACAGAGTGTTTCTTTGGATTAGGAGAGACTGGAAAGCGAGA ACAGAATTGGTTTGCTGCGACTTGCTGGAATCTTGGGTCAAGGTGTGGGAAGGAAAAGAA GTATGAGCTCTGTGGTGAATTCTTGAGGCTGGCATCTGAATTTTATGGCTATATAGATAC TGATGAGTCTGGAGAAGACAAACTGATGATTTGCAGGTCCATAATACTAAGTGTCACCGC TATGATTGCTTTGGAGAAGCAAACCAAGAGCGCACTGACTGAAACCCAAGTGAAACTTGC TGCAGAATTGCTCGTGAGAGCAGGAAAGATTATGTCTTCTTCGCTCTCAGATGGTAAAGA TTGTATCATGGAGCCAGAACTCATCTTTATGTACACTTTACTTGCGTATGACATACACGG AAGGCTCAACAATTCGGCATTCCAGTTACTTGTGGTAAAGACGTTTGCTGGTTCCAAGTC TTGTCATTACAACTATCTTCTCCAACTTGGAATTTTCGCCTCTCAAAGCCCTCAGTCCAA CCCGGACGTGTCAACATTTGCTCTTAACGAATGCCTATCCGCTCTGATCGCATCTGCTTC ACCAGAGTACCCAACCATAGCTCTTATAATCAGGAAGCTGATCTCCATAGCCAGCGTCCA CAAAGGCGATACAGACGATGAAGAAGCAATCTTAAAGATGTACAAACAAGCATACAGAAT CATGGTTGGGTTGAAGGAAGGGGAATACCCGACTGAAGAAGGGAAATGGCTCGCAATGAC AGCTTGGAACCGAGCAGCGTTGCCCGTGAGGCTAGGACAGTTTGAGACCGCTAAAAAATG GCTGAGCATCGGGTTGGAAATCGCTGATAAGGTTACAGGTATGGATACTTATAAAGCTTG TATGCAGGATTACTTGGCTGGTTTTCAGACCAAAGTTTCTTCTGCTTAGTTTCATTCATA TTAACTGTC