Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G48320.1
CDS Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr5:19581794-19584727 REVERSE LENGTH=2934 \| 201606
Sequence	ATGGAGTCGAACTCGAATCCCGAGTCAGAGCTCAAATCACTCATCTTTCAAATATATAGT CTGAGCGTGGGTTTGAATCCGGATTCATATTTAGATCCGGACTGGGATTCTATTTCTAAG ATGATACCACTCATTACTCAAACAATCTCTCTGGTCAGCTCAATGGATTTCGATTCGCAA CCGGGGTCGAGGCTCATGTCACTCACTAATCAAGCAATCTATGTCTTCAACTCTATGGAT TTTGATTCCCAGCCAGATTCGTTAAGGAAGCTCATAGCTCTCTTTTCACACAAGCTCTCT CTCGTCAACTCTACGGAATTTATTTCGGAGCAGGACACGAATTCACAGCCAGACTTGGAG TTTTTCGTGTTACTCATTCGAGAATTATGTAGTCCAACACCGGAGCCGCCAGAGCTTATA TCACTCATCAGTCAAATAATTGACGAAGTCGTCTGTTGGAAGCCACAGCCAGAGTTAGTT CGTGATTTGGAGCCAGAGCCGGAGCCGGAGCCGGAGCCGGAGCCGGAGATTAATCTTGGG TTGAAAATCATATCTCTCATTACTCAACTAATCTCCCAACCAATATCTTTATCCATTAAG ACATCTCTCATTCCTCAAATAATATCTATGGTCAGTAAAATTGATTTGGATGCGCAGCCG GAGACGGAAATGATGTCACTCACTACTCAAGCAGTCTCGCTCTTCAACTCTATGGATTTG GGTTCCCAGCCGGATCCGCTAAGGAAGCTCATATCTCTCATTTCTGGAGAAATCTCTCAT GTCAAATCTGTCAGCGTTTTAAAGCGGGAGCAAGACCCGGAATTGCGTCATTCTGCTGGA AGTTTACTAAGAGTCCCACGAGGCTTATATCGAAATTGCCATCCCGAAATAGATACCGGG ACAAAGTTATTGAAGCAGGATTCAAACTCGGGCACATATTCGAACATAGAGCATTTGGAG ATGGATTTGAACATAGAGCATTTGGAGATGGATTCGAACTCGGACACATATGTGTACATA AAGCTTTCGGAGCTAGATTCAGACCTGGACATAGAGTTCGACCTGGAGGCAGATCCCGAC CTCTTTTTCCGCTATTTTAAAAGAGTGAGTCTCGATTCCTACCTCATTTCCCTCGTTGGT GAAACATTGAGTCTCGAGCCACAGCCGGAGCTCATATCACTCATCTATCAAATATTCTCA CTCGTCGTCTCTATGTATTCAGAGTGGAAAAGGCTTATTTTCCTTTACCCTCAAGTACAA GTAAAATTGAAAAAAGGAAAATTTCAAGTGATTGACGAAGAAGTCTCGTGGAGCAGCAAT GGCAAGTGGAAGTGTCTCCCTTTTAACTGGGAGAAAATCTGGATATCTGAAGAAGGCGTT AGTCATATTCGCTGCCAAACTTGCAATGGCGAGAACCATGGAGAATATGAAAAGGCTCCA GTTGTGATCAAACATACTCTTCATCCAAAACATTCCCTCCAACTTGTCTTGTTGAATGGG GACACAACCAGGGAATGTTATTGTTGCGATAAAGATCTCGAAGAGGTATTTTATTATTGC TCGGCTTGCGATTATGCTATGAATATTGCTTGCATAAAGAGAACAAGAGTATTGTCTTTG GACCAACCGAAGTGGCATGAGCATACACTTGCTCAATTTCCAAGAAAGACTTCTTTAACT TGCAACGTTTGTGCCTTGACACATTCAAGCTGTCCATTTTATATGTGTCCCCCTTGCGAC TTTGTGGTCCACCAAAAGTGTATCAGCTTACCACGTGTCATAAGGATATCTCGTCATTTC CATCGTATCCATTTTACTCCTTCTTTCGACCAAGAAGTTCGATGTTGTGGTGTTTGTCGT AGAAAGATCGATAATGATTATGGGGGTTATTCTTGCAACAAGGACGGTTGTTGGTATGCA GCACATTCAAAATGTGCCACACAGAGCAATGTGTGGGATGGTAAAGAACTCGAGGGAGAG CCCGAAGAAGACATCAAAAAAATTGAGCCGTTTGTGACAGTAAGAGATGGAATCATACGA CATTTCAGTCATGACCATCATCATTTGAAACTTGATGAGAACATTGACAGAGATTACAAC GAGAATAAGTTGTGTCAAGCATGCATCACTCCGATATATTTCGGTAACTTCTACTCATGT ATGCAATGTGATTTCATTCTTCATGAAGAATGTGCAAAACTGTCTCGCAAAATACATCAC CCAGTACATCCACATCTGCTTACTCTAGTGGGAAGATCTGACCTTGTTATGGATGCTACG AAATCATGTTCAATTTGTTCTTGGAGGTGCACAACTGGTTTCTTCTATGAGTGCAGTGAA AGAGAATGTCGTTTTAAGGTACACGTGCAGTGTGCCACAATTTCCGAGCCATTGGTCCAT GCAAGTCATATGGATCCTTTGTTCTTAACATCGAAACCAGGAGAGGAACGAAGATGTTGT GTTTGCAAAGAGTTAGGACATTGTTCCACAAATGAAACATTCAATTGCATTGAGTGCGAC TTCGCTTTGTGTTTCAAGTGTGCTACTTTACCTCAAAAGGTGAGGTATAAGCACGATAAG CATATGCTTACTCTTTCTTATGGAGAGGAAACAAGTACCATGACGTATTGGTGTGAAGTT TGCGAGAAAAAAATAAACCCAAAGGAGCGGTTTTATATGTGTGATGAGTATTGTTGTGTC ACCCTTCACATTGAATGTATGCTTGGGGTGGACCTATACATGAAGTCTGGTTCATTTTGG CTCTATTGCAGTAGCAAGGTAAGCGTTTTACCCAATAATCACCATATGTCCAGACCTATT TGCTCCTTTTGTAAGAAGCGTTGTCCACACAACATAGTTTTCCAATGTTTAGGATTAATA TCGTGTTCCACTTCTTGTATTCGCGTTAAGGATTCTAAAAAGATGACCATGTAA

Peptide Sequence

PEP ID	AT5G48320.1
PEP Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr5:19581794-19584727 REVERSE LENGTH=977 \| 201606
Sequence	MESNSNPESELKSLIFQIYSLSVGLNPDSYLDPDWDSISKMIPLITQTISLVSSMDFDSQ PGSRLMSLTNQAIYVFNSMDFDSQPDSLRKLIALFSHKLSLVNSTEFISEQDTNSQPDLE FFVLLIRELCSPTPEPPELISLISQIIDEVVCWKPQPELVRDLEPEPEPEPEPEPEINLG LKIISLITQLISQPISLSIKTSLIPQIISMVSKIDLDAQPETEMMSLTTQAVSLFNSMDL GSQPDPLRKLISLISGEISHVKSVSVLKREQDPELRHSAGSLLRVPRGLYRNCHPEIDTG TKLLKQDSNSGTYSNIEHLEMDLNIEHLEMDSNSDTYVYIKLSELDSDLDIEFDLEADPD LFFRYFKRVSLDSYLISLVGETLSLEPQPELISLIYQIFSLVVSMYSEWKRLIFLYPQVQ VKLKKGKFQVIDEEVSWSSNGKWKCLPFNWEKIWISEEGVSHIRCQTCNGENHGEYEKAP VVIKHTLHPKHSLQLVLLNGDTTRECYCCDKDLEEVFYYCSACDYAMNIACIKRTRVLSL DQPKWHEHTLAQFPRKTSLTCNVCALTHSSCPFYMCPPCDFVVHQKCISLPRVIRISRHF HRIHFTPSFDQEVRCCGVCRRKIDNDYGGYSCNKDGCWYAAHSKCATQSNVWDGKELEGE PEEDIKKIEPFVTVRDGIIRHFSHDHHHLKLDENIDRDYNENKLCQACITPIYFGNFYSC MQCDFILHEECAKLSRKIHHPVHPHLLTLVGRSDLVMDATKSCSICSWRCTTGFFYECSE RECRFKVHVQCATISEPLVHASHMDPLFLTSKPGEERRCCVCKELGHCSTNETFNCIECD FALCFKCATLPQKVRYKHDKHMLTLSYGEETSTMTYWCEVCEKKINPKERFYMCDEYCCV TLHIECMLGVDLYMKSGSFWLYCSSKVSVLPNNHHMSRPICSFCKKRCPHNIVFQCLGLI SCSTSCIRVKDSKKMTM

Transcript Sequence

Transcript ID	AT5G48320.1
Transcript Infomation	\| Cysteine/Histidine-rich C1 domain family protein \| Chr5:19581697-19584772 REVERSE LENGTH=3076 \| 201606
Sequence	ATCATCTCATATCTCTCGTTGCTCAAAAAATCTCTCAGCATCTCTATGGAGTCGAACTCG AATCCCGAGTCAGAGCTCAAATCACTCATCTTTCAAATATATAGTCTGAGCGTGGGTTTG AATCCGGATTCATATTTAGATCCGGACTGGGATTCTATTTCTAAGATGATACCACTCATT ACTCAAACAATCTCTCTGGTCAGCTCAATGGATTTCGATTCGCAACCGGGGTCGAGGCTC ATGTCACTCACTAATCAAGCAATCTATGTCTTCAACTCTATGGATTTTGATTCCCAGCCA GATTCGTTAAGGAAGCTCATAGCTCTCTTTTCACACAAGCTCTCTCTCGTCAACTCTACG GAATTTATTTCGGAGCAGGACACGAATTCACAGCCAGACTTGGAGTTTTTCGTGTTACTC ATTCGAGAATTATGTAGTCCAACACCGGAGCCGCCAGAGCTTATATCACTCATCAGTCAA ATAATTGACGAAGTCGTCTGTTGGAAGCCACAGCCAGAGTTAGTTCGTGATTTGGAGCCA GAGCCGGAGCCGGAGCCGGAGCCGGAGCCGGAGATTAATCTTGGGTTGAAAATCATATCT CTCATTACTCAACTAATCTCCCAACCAATATCTTTATCCATTAAGACATCTCTCATTCCT CAAATAATATCTATGGTCAGTAAAATTGATTTGGATGCGCAGCCGGAGACGGAAATGATG TCACTCACTACTCAAGCAGTCTCGCTCTTCAACTCTATGGATTTGGGTTCCCAGCCGGAT CCGCTAAGGAAGCTCATATCTCTCATTTCTGGAGAAATCTCTCATGTCAAATCTGTCAGC GTTTTAAAGCGGGAGCAAGACCCGGAATTGCGTCATTCTGCTGGAAGTTTACTAAGAGTC CCACGAGGCTTATATCGAAATTGCCATCCCGAAATAGATACCGGGACAAAGTTATTGAAG CAGGATTCAAACTCGGGCACATATTCGAACATAGAGCATTTGGAGATGGATTTGAACATA GAGCATTTGGAGATGGATTCGAACTCGGACACATATGTGTACATAAAGCTTTCGGAGCTA GATTCAGACCTGGACATAGAGTTCGACCTGGAGGCAGATCCCGACCTCTTTTTCCGCTAT TTTAAAAGAGTGAGTCTCGATTCCTACCTCATTTCCCTCGTTGGTGAAACATTGAGTCTC GAGCCACAGCCGGAGCTCATATCACTCATCTATCAAATATTCTCACTCGTCGTCTCTATG TATTCAGAGTGGAAAAGGCTTATTTTCCTTTACCCTCAAGTACAAGTAAAATTGAAAAAA GGAAAATTTCAAGTGATTGACGAAGAAGTCTCGTGGAGCAGCAATGGCAAGTGGAAGTGT CTCCCTTTTAACTGGGAGAAAATCTGGATATCTGAAGAAGGCGTTAGTCATATTCGCTGC CAAACTTGCAATGGCGAGAACCATGGAGAATATGAAAAGGCTCCAGTTGTGATCAAACAT ACTCTTCATCCAAAACATTCCCTCCAACTTGTCTTGTTGAATGGGGACACAACCAGGGAA TGTTATTGTTGCGATAAAGATCTCGAAGAGGTATTTTATTATTGCTCGGCTTGCGATTAT GCTATGAATATTGCTTGCATAAAGAGAACAAGAGTATTGTCTTTGGACCAACCGAAGTGG CATGAGCATACACTTGCTCAATTTCCAAGAAAGACTTCTTTAACTTGCAACGTTTGTGCC TTGACACATTCAAGCTGTCCATTTTATATGTGTCCCCCTTGCGACTTTGTGGTCCACCAA AAGTGTATCAGCTTACCACGTGTCATAAGGATATCTCGTCATTTCCATCGTATCCATTTT ACTCCTTCTTTCGACCAAGAAGTTCGATGTTGTGGTGTTTGTCGTAGAAAGATCGATAAT GATTATGGGGGTTATTCTTGCAACAAGGACGGTTGTTGGTATGCAGCACATTCAAAATGT GCCACACAGAGCAATGTGTGGGATGGTAAAGAACTCGAGGGAGAGCCCGAAGAAGACATC AAAAAAATTGAGCCGTTTGTGACAGTAAGAGATGGAATCATACGACATTTCAGTCATGAC CATCATCATTTGAAACTTGATGAGAACATTGACAGAGATTACAACGAGAATAAGTTGTGT CAAGCATGCATCACTCCGATATATTTCGGTAACTTCTACTCATGTATGCAATGTGATTTC ATTCTTCATGAAGAATGTGCAAAACTGTCTCGCAAAATACATCACCCAGTACATCCACAT CTGCTTACTCTAGTGGGAAGATCTGACCTTGTTATGGATGCTACGAAATCATGTTCAATT TGTTCTTGGAGGTGCACAACTGGTTTCTTCTATGAGTGCAGTGAAAGAGAATGTCGTTTT AAGGTACACGTGCAGTGTGCCACAATTTCCGAGCCATTGGTCCATGCAAGTCATATGGAT CCTTTGTTCTTAACATCGAAACCAGGAGAGGAACGAAGATGTTGTGTTTGCAAAGAGTTA GGACATTGTTCCACAAATGAAACATTCAATTGCATTGAGTGCGACTTCGCTTTGTGTTTC AAGTGTGCTACTTTACCTCAAAAGGTGAGGTATAAGCACGATAAGCATATGCTTACTCTT TCTTATGGAGAGGAAACAAGTACCATGACGTATTGGTGTGAAGTTTGCGAGAAAAAAATA AACCCAAAGGAGCGGTTTTATATGTGTGATGAGTATTGTTGTGTCACCCTTCACATTGAA TGTATGCTTGGGGTGGACCTATACATGAAGTCTGGTTCATTTTGGCTCTATTGCAGTAGC AAGGTAAGCGTTTTACCCAATAATCACCATATGTCCAGACCTATTTGCTCCTTTTGTAAG AAGCGTTGTCCACACAACATAGTTTTCCAATGTTTAGGATTAATATCGTGTTCCACTTCT TGTATTCGCGTTAAGGATTCTAAAAAGATGACCATGTAACTTGGCTTGACGGACATCGCT CGAGCAACAAGATATTATTGAAATTTTATGGTGTTATATACTTATATGAAAGAATTCTTA AAATGGTCTACATTTG