Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G48160.1
CDS Infomation	\| potyvirus VPg interacting protein (DUF1423) \| Chr5:19528019-19529820 REVERSE LENGTH=1725 \| 201606
Sequence	ATGGGAACATCATCTGGTTCGAATCATCCTCACCAAATGTTACCACCACGTCAACAACAA CGAAGTGGAGGAGGACTTGAAACAGCTCTTTCACTAGTCTCTTCAGATCAAGAGCCGCGT CGCGAGTCTCCAGCGGAGAGTGCGAGTTCTCAAGAAACATGGCCACTAGGAGACACTGTT GCTGGGAAGAAGTCAATGAGTCAAAAGACAGAGCCTGATTCTATGGAACAAACTGTGAAT GTGATGCACCATGTTTCGAATGCGGACAAGGTATCGGTACGGGATATCGCTAGGGAAAGA GTTGAGTTAGTTGCAGAGAGAATGCATCGATTACCGGATGAGTTTCTTGACGAGTTAAAG AACGGTCTTAAGTCTATCCTTGAAGGGAATGTAGCGCAGAGTGTTGATGAGTTCATGTTC TTGCAGAAGGTTGTTCAGAGTAGAACTGATTTGAGCTCTGTAACACTTGTTAGAGCTCAT CGGGTGCAGCTTGAGATACTTGTAGCGATAAATACCGGGATTCAGGCGTTTTTGCATCCG AATATTAGTCTGTCTCAGCCGTCTCTTATCGAGATTTTTGTATACAAGAGATGTAGAAAC ATAGCTTGCCAAAATCAACTACCTGCTGATGATTGCTACTGTGATATATGTACTAATAGG AAAGGGTTTTGTAACCTTTGTATGTGTACGATCTGTAACAAGTTTGATTTTTCGGTTAAT ACTTGCCGCTGGATCGGATGTGACTTGTGTTCCCACTGGACTCATACGGATTGTGCTATT CGGGATGGACAGATCACCACTGGATCCTCTGCTAAGAATAATACTTCAGGTCCAGGAGAG ATAGTGTTTAAGTGTCGGGCTTGTAACCGAACGTCTGAGCTGTTGGGATGGGTTAAAGAT GTGTTTCAGCACTGTGCACCGAACTGGGATCGAGAATCTTTGATGAAGGAACTTGATTTT GTTAGTAGGATTTTCCGCGGAAGCGAAGATCAACGAGGTAGGAAACTGTTTTGGAAGTGT GAGGAGCTTATTGACAAGATTAAAGGTGGTTTGGCTGAAGCAACTGCTGCCAAATTGATA TTAATGTTTTTCCAAGAGATCGAATCAGACTCTGCGAAGAGCTTTGAAAATGGAGAAGGT GGACGTTTGATGGCACCTCAGGATGCATGCAACCGAATTGCTGAAGTTGTACAAGAGACT TTGAGGAAAATGGAGATAGTGGCTGAGGAGAAGATGAGAATGTTCAAGAAGGCACGCATG GCTCTTGAGACATGCGATAGAGAGCTCGAAGACAAAGCCAAGGAAGTTTCAGAACTGAAA GCAGAGAGGCAGAAGAAGAAACTTCAGATAGATGAGCTAGAGAGAATCGTGAGGCTGAAG CAAGCGGAGGCAGACATGTTCCAGCTTAAAGCAAATGAAGCAAAGCGGGAGGCTGATAGG TTGCAGAGGATTGTACTAGCGAAAATGGATAAGTCTGAGGAGGAATACGCAAGTAACTAT CTGAAACAGAGGCTGAGTGAGGCCGAGGCAGAGAAGCAGTATCTGTTTGAGAAGATTAAG CTGCAGGAAAACTCAAGGGTGGCATCACAAAGCAGTGGTGGGGGAGGAGACCCGTCACAG GTGATGATGTACTCAAAGATCCGCGATCTGCTTCAAGGATACAATCTCTCTCCCAAGGTT GATCCTCAATTAAACGAGCGTAATCCTTTCAGATCCAATCCCTAA

Peptide Sequence

PEP ID	AT5G48160.1
PEP Infomation	\| potyvirus VPg interacting protein (DUF1423) \| Chr5:19528019-19529820 REVERSE LENGTH=574 \| 201606
Sequence	MGTSSGSNHPHQMLPPRQQQRSGGGLETALSLVSSDQEPRRESPAESASSQETWPLGDTV AGKKSMSQKTEPDSMEQTVNVMHHVSNADKVSVRDIARERVELVAERMHRLPDEFLDELK NGLKSILEGNVAQSVDEFMFLQKVVQSRTDLSSVTLVRAHRVQLEILVAINTGIQAFLHP NISLSQPSLIEIFVYKRCRNIACQNQLPADDCYCDICTNRKGFCNLCMCTICNKFDFSVN TCRWIGCDLCSHWTHTDCAIRDGQITTGSSAKNNTSGPGEIVFKCRACNRTSELLGWVKD VFQHCAPNWDRESLMKELDFVSRIFRGSEDQRGRKLFWKCEELIDKIKGGLAEATAAKLI LMFFQEIESDSAKSFENGEGGRLMAPQDACNRIAEVVQETLRKMEIVAEEKMRMFKKARM ALETCDRELEDKAKEVSELKAERQKKKLQIDELERIVRLKQAEADMFQLKANEAKREADR LQRIVLAKMDKSEEEYASNYLKQRLSEAEAEKQYLFEKIKLQENSRVASQSSGGGGDPSQ VMMYSKIRDLLQGYNLSPKVDPQLNERNPFRSNP

Transcript Sequence

Transcript ID	AT5G48160.1
Transcript Infomation	\| potyvirus VPg interacting protein (DUF1423) \| Chr5:19527767-19530430 REVERSE LENGTH=2209 \| 201606
Sequence	CTCCTCTATGAAAGATTTTTAAAGAGAGAAAAGAGGAAAAGCTTCGGCGTCAAGTTTTTT GTTTTTTTTCCTCCTCTCTAGTCAACAATTCTTATCTCTTTTTTTCTTTTCTTACAATAA AACAATACTTGTCCTCACATTTTGTCTTGTCTCACTCTCTCTCCCATTGATCTTCTTCCT CGGCTACATCTCCCGACGCCTCTCTCTCGTTCCGATTTTGGTTTAATATTTGATGGGAAC ATCATCTGGTTCGAATCATCCTCACCAAATGTTACCACCACGTCAACAACAACGAAGTGG AGGAGGACTTGAAACAGCTCTTTCACTAGTCTCTTCAGATCAAGAGCCGCGTCGCGAGTC TCCAGCGGAGAGTGCGAGTTCTCAAGAAACATGGCCACTAGGAGACACTGTTGCTGGGAA GAAGTCAATGAGTCAAAAGACAGAGCCTGATTCTATGGAACAAACTGTGAATGTGATGCA CCATGTTTCGAATGCGGACAAGGTATCGGTACGGGATATCGCTAGGGAAAGAGTTGAGTT AGTTGCAGAGAGAATGCATCGATTACCGGATGAGTTTCTTGACGAGTTAAAGAACGGTCT TAAGTCTATCCTTGAAGGGAATGTAGCGCAGAGTGTTGATGAGTTCATGTTCTTGCAGAA GGTTGTTCAGAGTAGAACTGATTTGAGCTCTGTAACACTTGTTAGAGCTCATCGGGTGCA GCTTGAGATACTTGTAGCGATAAATACCGGGATTCAGGCGTTTTTGCATCCGAATATTAG TCTGTCTCAGCCGTCTCTTATCGAGATTTTTGTATACAAGAGATGTAGAAACATAGCTTG CCAAAATCAACTACCTGCTGATGATTGCTACTGTGATATATGTACTAATAGGAAAGGGTT TTGTAACCTTTGTATGTGTACGATCTGTAACAAGTTTGATTTTTCGGTTAATACTTGCCG CTGGATCGGATGTGACTTGTGTTCCCACTGGACTCATACGGATTGTGCTATTCGGGATGG ACAGATCACCACTGGATCCTCTGCTAAGAATAATACTTCAGGTCCAGGAGAGATAGTGTT TAAGTGTCGGGCTTGTAACCGAACGTCTGAGCTGTTGGGATGGGTTAAAGATGTGTTTCA GCACTGTGCACCGAACTGGGATCGAGAATCTTTGATGAAGGAACTTGATTTTGTTAGTAG GATTTTCCGCGGAAGCGAAGATCAACGAGGTAGGAAACTGTTTTGGAAGTGTGAGGAGCT TATTGACAAGATTAAAGGTGGTTTGGCTGAAGCAACTGCTGCCAAATTGATATTAATGTT TTTCCAAGAGATCGAATCAGACTCTGCGAAGAGCTTTGAAAATGGAGAAGGTGGACGTTT GATGGCACCTCAGGATGCATGCAACCGAATTGCTGAAGTTGTACAAGAGACTTTGAGGAA AATGGAGATAGTGGCTGAGGAGAAGATGAGAATGTTCAAGAAGGCACGCATGGCTCTTGA GACATGCGATAGAGAGCTCGAAGACAAAGCCAAGGAAGTTTCAGAACTGAAAGCAGAGAG GCAGAAGAAGAAACTTCAGATAGATGAGCTAGAGAGAATCGTGAGGCTGAAGCAAGCGGA GGCAGACATGTTCCAGCTTAAAGCAAATGAAGCAAAGCGGGAGGCTGATAGGTTGCAGAG GATTGTACTAGCGAAAATGGATAAGTCTGAGGAGGAATACGCAAGTAACTATCTGAAACA GAGGCTGAGTGAGGCCGAGGCAGAGAAGCAGTATCTGTTTGAGAAGATTAAGCTGCAGGA AAACTCAAGGGTGGCATCACAAAGCAGTGGTGGGGGAGGAGACCCGTCACAGGTGATGAT GTACTCAAAGATCCGCGATCTGCTTCAAGGATACAATCTCTCTCCCAAGGTTGATCCTCA ATTAAACGAGCGTAATCCTTTCAGATCCAATCCCTAATGCTTCTTCCTCCCTTATATATA TATGTAGTTTTCATATCCTAAATTTCATCACTGTGTTTTGTAAAACGAGTGTTTGTTGCC GTGTAGGATCTATCTATATTACTGATGTTTTGTAATTTGTGTGTTCTCACTTTGTTGATA TGACGTTGTTTATCTATGTTATGGTTTCTTGGTTGGTTGATTCAGTGATTTAGGAAACGT AGAAAGAGTTGATTGTGCAAACAACAGTCTTAATTAATCTTTGTCATGA