Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G48140.1
CDS Infomation	\| Pectin lyase-like superfamily protein \| Chr5:19518907-19520412 REVERSE LENGTH=1188 \| 201606
Sequence	ATGGGTCGTGTACATTTTGGTGTATCAGCATTCTTTGTTTTTTGTTTGTTAGGTTTATCA GCTAATGCAAAGATCTTCAATATTAATTCTCCTCCAGGTTCTGATATCACTAACGCATTG TTGAAAGCATTCAATGAGGCATGCCAATTCCCGACAAAGAGCACCGTTATGATCCCAAAA GGTGAATACAAGCTTGGGGAGATCGTGATGATGGGTCCATGCAAAGCTCCTATAAGGATT GCTCTTCTAGGTACCGTGAAAGCTGACGGTAACGCTAATGGAAAGGAGAAATGGGTCGCT TTCCGCAACATTAATGGGTTTAAGTTGAACGGAGGTGGTGTTTTCGACGGTGAAGGAAAC GCAGCTTGGAGGGTCAACAACTGCCACAAGACTTTCAACTGCAAGAAGCTCCCCATCAGC ATTAGGTTTGATTTCGTCACCGACGCGAAAATTAGAGGCATTACCTCCTTAGATGCAAAG CACTTCCACATTAACGTCATTGGAGCAAAGAACGTGACATTCGAAGACGTCAAGATCATT GCCCCTGCAGAGAGTCCCAACACCGATGGTATCCACGTTGGAAGAAGTGACGGAATCAAG ATCATCAATTCATTTATCTCCACAGGAGATGACTGTGTCTCTGTTGGAGATGGGATGAAG AACCTTCTTGTCGAAAGAGTTACATGCGGTCCGGGACATGGAATCAGTATTGGAAGTCTT GGAAGGTACAGCCACGAGGAAAACGTTAGTGGCATCAAGATCATCAACTGCACTCTCCAA GAGACTGACAATGGTCTAAGGATCAAGACATGGCCTTCTGCTGCTTGTACCACAACCGCC TCCGATATCCATTTCGAGAACATCCTCCTCAAGAACGTCAGCAACCCCATCCTCATCGAC CAAGAGTACTGCCCATGGAACCAATGCAACAAGCAGAAACCATCAACGATCAAGTTGGCC AACATTAGCTTCAAGAAGATCAGAGGAACATCAGGAAACAAAGACGCAGTGAAGCTTTTG TGTAGCAAGGGATATCCATGTCAGAACGTTGAGGTTGGTGACGTGAACATCCAGTATACC GGAGCAGATGGTCCAGCGACTTTCCAATGCTCTAACGTATCACCAAAGCTTGTGGGAACT CAGATTCCAAAAGCGTGTAGCAGCCCGGTGACAAAGCCACCAAAGTAG

Peptide Sequence

PEP ID	AT5G48140.1
PEP Infomation	\| Pectin lyase-like superfamily protein \| Chr5:19518907-19520412 REVERSE LENGTH=395 \| 201606
Sequence	MGRVHFGVSAFFVFCLLGLSANAKIFNINSPPGSDITNALLKAFNEACQFPTKSTVMIPK GEYKLGEIVMMGPCKAPIRIALLGTVKADGNANGKEKWVAFRNINGFKLNGGGVFDGEGN AAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKII APAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSL GRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILID QEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYT GADGPATFQCSNVSPKLVGTQIPKACSSPVTKPPK

Transcript Sequence

Transcript ID	AT5G48140.1
Transcript Infomation	\| Pectin lyase-like superfamily protein \| Chr5:19518666-19520528 REVERSE LENGTH=1545 \| 201606
Sequence	ACATAAAAAATAAAAAATACTGTAAAATAAATAGATAGTCATAACTAGTGTATTACAAAA AAAAAATAAAGTAAATAAAAGTAATCACTAGCTAGTGACTAAACTAAATCCCAATTATGG GTCGTGTACATTTTGGTGTATCAGCATTCTTTGTTTTTTGTTTGTTAGGTTTATCAGCTA ATGCAAAGATCTTCAATATTAATTCTCCTCCAGGTTCTGATATCACTAACGCATTGTTGA AAGCATTCAATGAGGCATGCCAATTCCCGACAAAGAGCACCGTTATGATCCCAAAAGGTG AATACAAGCTTGGGGAGATCGTGATGATGGGTCCATGCAAAGCTCCTATAAGGATTGCTC TTCTAGGTACCGTGAAAGCTGACGGTAACGCTAATGGAAAGGAGAAATGGGTCGCTTTCC GCAACATTAATGGGTTTAAGTTGAACGGAGGTGGTGTTTTCGACGGTGAAGGAAACGCAG CTTGGAGGGTCAACAACTGCCACAAGACTTTCAACTGCAAGAAGCTCCCCATCAGCATTA GGTTTGATTTCGTCACCGACGCGAAAATTAGAGGCATTACCTCCTTAGATGCAAAGCACT TCCACATTAACGTCATTGGAGCAAAGAACGTGACATTCGAAGACGTCAAGATCATTGCCC CTGCAGAGAGTCCCAACACCGATGGTATCCACGTTGGAAGAAGTGACGGAATCAAGATCA TCAATTCATTTATCTCCACAGGAGATGACTGTGTCTCTGTTGGAGATGGGATGAAGAACC TTCTTGTCGAAAGAGTTACATGCGGTCCGGGACATGGAATCAGTATTGGAAGTCTTGGAA GGTACAGCCACGAGGAAAACGTTAGTGGCATCAAGATCATCAACTGCACTCTCCAAGAGA CTGACAATGGTCTAAGGATCAAGACATGGCCTTCTGCTGCTTGTACCACAACCGCCTCCG ATATCCATTTCGAGAACATCCTCCTCAAGAACGTCAGCAACCCCATCCTCATCGACCAAG AGTACTGCCCATGGAACCAATGCAACAAGCAGAAACCATCAACGATCAAGTTGGCCAACA TTAGCTTCAAGAAGATCAGAGGAACATCAGGAAACAAAGACGCAGTGAAGCTTTTGTGTA GCAAGGGATATCCATGTCAGAACGTTGAGGTTGGTGACGTGAACATCCAGTATACCGGAG CAGATGGTCCAGCGACTTTCCAATGCTCTAACGTATCACCAAAGCTTGTGGGAACTCAGA TTCCAAAAGCGTGTAGCAGCCCGGTGACAAAGCCACCAAAGTAGAATGTGTATATATTAT AAACTCAATACACAATCTAAATGTACACCCTTAGTGTATGCTGTATGCTTCAATTGATAT CTTTGTGAAATGACCTATTTTTTTGAGCTTTTGGTATATTGTAAGAAATGAACCATTCTT GAAAAAAAAAAACATCTAACTAATTTAATAACTTGTGACTAATTCCAAACTGCATTCAAT ATAGTTGAACAAAGATATTTGTAACGAAATCATTGGCGAAATGGT