Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G47940.1
CDS Infomation	\| 40S ribosomal protein S27 \| Chr5:19409407-19411893 REVERSE LENGTH=2250 \| 201606
Sequence	ATGGGTGCAAGCAATCACGATAACGATTTCAATTCTACGACAAACTGGAAACTCGTCGAC GGTACACTCATAGACGCCATCTCATTTGAATCCTCCTTCACTGCAAACCCCGAATCTGAC GACGGAATCATCTCTGCCGCCGTCGATCATGTAACCAAATCCCCGTTACTTCTTCTCCCT CCGGTTCCCAACGGCGAGCCTTGTGAAATTACAATTACATTTGCACAAGAACATGAATTA AGGCAAATCTACATCCGAAGTAGTGCACGAGTATACGAAGTGTATTACACGAAAAAGCGA CGACATGATAAGGAATATCTGTGTACTGTTCGATGTGGTGTTGCAATTAGAGATGAAGAA GTGCTTCAGATCCCTCTTACAGAGTCAGCTGATTCTAAACCAGTAAAGGATTTGATCGAG AGGAAGGTTGCAGATAATGGTAATGGACGGACGAGCGAAGATGATTGGGTTGAAGTGAAA GCTAGTGATGATTCTCTGTTGAATAATGAAAAACAGGATTTTTATGAAGCTACTGCGGAG ATCAATGATGCGGAACCTTGCACTTCGATTACAGTTCGTCTCCTCTCCCTTCAGGATAAA AGATGTGCACTTGTAGATGAAGTTTATGTATTTGCTGATCCTGTTGATCCAAGTGAGTCA GAGAAGGAAGAAGCAACTGGAACAGGAAATTCATCTAGTAGTTCGTTGATGGCTATGTTT ATGCCTGCTCTTTTGCAGCTATCTCGAGGAAAAGATGTCAGAAAAGAACGGGATATACAA GTTTCCGACAAGTCCAACAGTACAGATCCAGTAGCTATAGGAAATACTGATCAGATAGGA GTGAGCTCACCAGTTTTAGTTGATACTGTTGCAAAGCAGGTTGATGCAGCAACACGAGTA TCTGGAGCAGAAAGCAAGCCTGCTATACCTTGCAATAATGTGGAGACTATTCTGAATCAG CTTGTTAACAAGGTAAGTATGATAGAAACTATCTTGATAAGATTTGAAGATCAGATGTTG AAACCTATTAATAGTATTGATGCAAGGCTCCAGTTAGTTGAGAAGAAACTCGAACAGCTA GGAAAGAAATCATTTGAATCTGATTTGGGTTTTCGAACGAAAATACCCAATCAAGATTCT CTGCGCAGTGATACTGATAAAACTCCTGATACCGATGAGAGTGATGGATTGACTAAAAAC ACGGATGTAGTTCCTGACTCCTCTAGTATAGACAACAGTGAAGATTGTGCTGTTGTACTA CCGAAGAACAGGCTTGATAATATTCTTTCAAAGTCTGTGGAACTGGAGAGTGAAAATAGC TCAATCTCAGGGAATGAGATGATTTCTGCTGAACCTGAGATCAGTAATGAGGAGGTTGGT CATTCATTTGAAGAGAAACCAAAACATTCGTTGTCTATAAATGATGCTTTAGCATCTGCA CTTGCTGGGTTATTGTCTTCACATTCGATCACCGATGGAAAATACAGTCAAGCCCTCGTA ATTACAGCCCCAGAATTTTCAAGTGAAGATGATGTGGAGATAGAAGAGAAACCTGGGACG AGTGCCCATCCAGACGATAGCCAAGTTGCAGCAGAGGAGTCTGAAAACAGGTACTCTTCT TCCTTGGAGAGCTCTACTTCGTCACAGAAAGAGCCCGGAATTACTCCAGACGATTCTCAT GGAACGATGTATGGAGTTTTTAAAAAACTGGATGATAGTTTTGGAGGAGATGAGGAAGCT GAGACTGTGGTTAGCGTCAGCGACAATGCTTTAGATGAAGAGACGGTAACATCAAGCACA AAAGCTGATTGTTACACAGAAAGGGAAAACCTCAGTTATAAACCCACGGAACCTGATTCC CTGATTCACGAGCTCGAGAGTTCAAATGTAACTACCGCAAAATGCAAAGGAGAGCCTTCA ATGGATGATGTCTTGAAGAGTGTTCTAGGTTTTCAACCGACTACTTCTTCGGTCGATTTC CTAACACCAGTCCTGGATGTGAAATTTAATTTAGAGAATAAAGACTCAGACAGCAAGTAT TTCTTTGAGGTACTCTTCACAGAAGAATCGAAAACTTATGTAGATTGCAAGAACGATGTT TTTGATGATAACTTAGTCTCAGTGGAAGATGAAGAAGAACTCAAAGGACCACCAACAGAT ACCCTTTCGTCTGTGGAGATGAATCACTATGCGACGAACGAGATGCCTATACACTGGAAT GGTGAAATATCAGAAGCGAGTCTTATATAA

Peptide Sequence

PEP ID	AT5G47940.1
PEP Infomation	\| 40S ribosomal protein S27 \| Chr5:19409407-19411893 REVERSE LENGTH=749 \| 201606
Sequence	MGASNHDNDFNSTTNWKLVDGTLIDAISFESSFTANPESDDGIISAAVDHVTKSPLLLLP PVPNGEPCEITITFAQEHELRQIYIRSSARVYEVYYTKKRRHDKEYLCTVRCGVAIRDEE VLQIPLTESADSKPVKDLIERKVADNGNGRTSEDDWVEVKASDDSLLNNEKQDFYEATAE INDAEPCTSITVRLLSLQDKRCALVDEVYVFADPVDPSESEKEEATGTGNSSSSSLMAMF MPALLQLSRGKDVRKERDIQVSDKSNSTDPVAIGNTDQIGVSSPVLVDTVAKQVDAATRV SGAESKPAIPCNNVETILNQLVNKVSMIETILIRFEDQMLKPINSIDARLQLVEKKLEQL GKKSFESDLGFRTKIPNQDSLRSDTDKTPDTDESDGLTKNTDVVPDSSSIDNSEDCAVVL PKNRLDNILSKSVELESENSSISGNEMISAEPEISNEEVGHSFEEKPKHSLSINDALASA LAGLLSSHSITDGKYSQALVITAPEFSSEDDVEIEEKPGTSAHPDDSQVAAEESENRYSS SLESSTSSQKEPGITPDDSHGTMYGVFKKLDDSFGGDEEAETVVSVSDNALDEETVTSST KADCYTERENLSYKPTEPDSLIHELESSNVTTAKCKGEPSMDDVLKSVLGFQPTTSSVDF LTPVLDVKFNLENKDSDSKYFFEVLFTEESKTYVDCKNDVFDDNLVSVEDEEELKGPPTD TLSSVEMNHYATNEMPIHWNGEISEASLI

Transcript Sequence

Transcript ID	AT5G47940.1
Transcript Infomation	\| 40S ribosomal protein S27 \| Chr5:19409242-19412077 REVERSE LENGTH=2599 \| 201606
Sequence	CTTAAACAGAGTATCTAAGTTAAGTTAACATATTAAAAAAATTCTAATGTAAATTTATAT AATCATCTTCATTTTATTGGATCCAAAAATCTTCCTCAAATATAAACCCAAAATCCTTTT TCTTTGTTTTGGTAAAATAAGTAAACCCAAAATCTTCCCAAATCAATCAAAGCGAGAAAG AGCTATGGGTGCAAGCAATCACGATAACGATTTCAATTCTACGACAAACTGGAAACTCGT CGACGGTACACTCATAGACGCCATCTCATTTGAATCCTCCTTCACTGCAAACCCCGAATC TGACGACGGAATCATCTCTGCCGCCGTCGATCATGTAACCAAATCCCCGTTACTTCTTCT CCCTCCGGTTCCCAACGGCGAGCCTTGTGAAATTACAATTACATTTGCACAAGAACATGA ATTAAGGCAAATCTACATCCGAAGTAGTGCACGAGTATACGAAGTGTATTACACGAAAAA GCGACGACATGATAAGGAATATCTGTGTACTGTTCGATGTGGTGTTGCAATTAGAGATGA AGAAGTGCTTCAGATCCCTCTTACAGAGTCAGCTGATTCTAAACCAGTAAAGGATTTGAT CGAGAGGAAGGTTGCAGATAATGGTAATGGACGGACGAGCGAAGATGATTGGGTTGAAGT GAAAGCTAGTGATGATTCTCTGTTGAATAATGAAAAACAGGATTTTTATGAAGCTACTGC GGAGATCAATGATGCGGAACCTTGCACTTCGATTACAGTTCGTCTCCTCTCCCTTCAGGA TAAAAGATGTGCACTTGTAGATGAAGTTTATGTATTTGCTGATCCTGTTGATCCAAGTGA GTCAGAGAAGGAAGAAGCAACTGGAACAGGAAATTCATCTAGTAGTTCGTTGATGGCTAT GTTTATGCCTGCTCTTTTGCAGCTATCTCGAGGAAAAGATGTCAGAAAAGAACGGGATAT ACAAGTTTCCGACAAGTCCAACAGTACAGATCCAGTAGCTATAGGAAATACTGATCAGAT AGGAGTGAGCTCACCAGTTTTAGTTGATACTGTTGCAAAGCAGGTTGATGCAGCAACACG AGTATCTGGAGCAGAAAGCAAGCCTGCTATACCTTGCAATAATGTGGAGACTATTCTGAA TCAGCTTGTTAACAAGGTAAGTATGATAGAAACTATCTTGATAAGATTTGAAGATCAGAT GTTGAAACCTATTAATAGTATTGATGCAAGGCTCCAGTTAGTTGAGAAGAAACTCGAACA GCTAGGAAAGAAATCATTTGAATCTGATTTGGGTTTTCGAACGAAAATACCCAATCAAGA TTCTCTGCGCAGTGATACTGATAAAACTCCTGATACCGATGAGAGTGATGGATTGACTAA AAACACGGATGTAGTTCCTGACTCCTCTAGTATAGACAACAGTGAAGATTGTGCTGTTGT ACTACCGAAGAACAGGCTTGATAATATTCTTTCAAAGTCTGTGGAACTGGAGAGTGAAAA TAGCTCAATCTCAGGGAATGAGATGATTTCTGCTGAACCTGAGATCAGTAATGAGGAGGT TGGTCATTCATTTGAAGAGAAACCAAAACATTCGTTGTCTATAAATGATGCTTTAGCATC TGCACTTGCTGGGTTATTGTCTTCACATTCGATCACCGATGGAAAATACAGTCAAGCCCT CGTAATTACAGCCCCAGAATTTTCAAGTGAAGATGATGTGGAGATAGAAGAGAAACCTGG GACGAGTGCCCATCCAGACGATAGCCAAGTTGCAGCAGAGGAGTCTGAAAACAGGTACTC TTCTTCCTTGGAGAGCTCTACTTCGTCACAGAAAGAGCCCGGAATTACTCCAGACGATTC TCATGGAACGATGTATGGAGTTTTTAAAAAACTGGATGATAGTTTTGGAGGAGATGAGGA AGCTGAGACTGTGGTTAGCGTCAGCGACAATGCTTTAGATGAAGAGACGGTAACATCAAG CACAAAAGCTGATTGTTACACAGAAAGGGAAAACCTCAGTTATAAACCCACGGAACCTGA TTCCCTGATTCACGAGCTCGAGAGTTCAAATGTAACTACCGCAAAATGCAAAGGAGAGCC TTCAATGGATGATGTCTTGAAGAGTGTTCTAGGTTTTCAACCGACTACTTCTTCGGTCGA TTTCCTAACACCAGTCCTGGATGTGAAATTTAATTTAGAGAATAAAGACTCAGACAGCAA GTATTTCTTTGAGGTACTCTTCACAGAAGAATCGAAAACTTATGTAGATTGCAAGAACGA TGTTTTTGATGATAACTTAGTCTCAGTGGAAGATGAAGAAGAACTCAAAGGACCACCAAC AGATACCCTTTCGTCTGTGGAGATGAATCACTATGCGACGAACGAGATGCCTATACACTG GAATGGTGAAATATCAGAAGCGAGTCTTATATAAAGGGAAAATTAAATGCGGCATCAAAG CCCGCATTTTGTTTTCTTCTGATATCTACATATTTTTTTTTGGAACTATTTTTGCAAATA TATTCTCTATTTTGCACTTATTTACAATGACATACTACCGAATTTATTTACTTGAATTAA AATCTTGCGACTAATACTT