Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G47580.1
CDS Infomation	\| transmembrane protein \| Chr5:19294948-19297194 REVERSE LENGTH=2247 \| 201606
Sequence	ATGGGTATCCTCGGCTGCGACGCCCATGGCGATTTGAACGATGCAGAGTTCAGCAAACCC TTACCTTCGATTGGTATCTACGTTGCCGTAGCTTCACTCATCTGTGGTCTAGCCATGGCC GCCGATCTTATACACGGCTTCCGACACCGCAAATTCTGGTTTCCCTGTAAGTTCTTCTCT CTCAACGCCACTTCTCTGACTTTCATCGCTGTCGGAATCAAACTCTCTGTGGATCTCAAC ACTTCCATGCCGAGTCGTCAGGATCAGTTAGCTAAACTCAGCAGCACCGTCTTTGTATGT ACTGTGATGGGTAATTCGATGCCTTCTCTGGGTATTATGGACAACAATGATCTCCTCATG AATCTTATGGCTTTAGGGATTCTTGTCATCACTGATGTTGTTAACATCTGTATTCAGTTG GGTACTGGTGCGATTTATGTTTTCTCTGAGGAACATTTTCTGGTCGTACTTCTCATGCTT CTTATGCTTATGATCTTGTGTTTCTCGGCCACCACAGTTCCCACTACGAAAAGAATCTTG GAGAGTAAGTACAATAAGAGGTACGACGTTGCTATGAAGTGTCCTTTGGCTACAGAGAGA ACAGTTGCTAAGAAAATTCAGCAAGATTTGTCAAAGTTTTGGATGATGGCTCATACTAGT AGCCCTCAATTCGTGATGGCTCGTTCTGTCACGTGCACTGCTTCTGGTTTCTTCTGTCTC CTGAGTGCCATTACGCTTGGTGAAGCTATGGTTAGGAGTTACTTTTTAAGACCAAGGTCA CTTGGGTTCTGCCATGGAGATTCTGATTACAAATGGTCAACTTCTCTGGTTCTTGTTTGC CAGACTACTACTGTAGCTATAGGGACCATTGCTCCTGCGATCAGATGGTTCACGGCTGTG AACTTCAGGTGTCCGATTAGAGGAAAGAAGTATTATAGAGATGAGTTTAGAATAGAGAGT TACTGGACACATTGGTTCTCAGAGAAGAAGCAACATCCCTTAAGCCTTTGGATCCTCAAA GAACGCAGATACAGGAAGACTGCACACAATGCAAAACGCTGGATATTGGATGTATGTATT GTGATACAGTATGTGATTGTGTTTGGTAGCAAAATTATCCGTTACATCTCGGTATCCTGT GTGGGTAAGATCTTGTTGTGCTGTCATTTCGCCTTAAGGACCAGTAATACTATCACACAC AGTGAGTCAGAAAAATCCGATTCAAATCCAAGCTCGAGACAGGACCTAGCGAGTTTTGTC CTGCACCTTGAAGGAGAGGACCCGCTGGTGGATGTGATGGTGCGGAGCAACCGGGAAGCG ACAGATCATTGGATAGAGAAGGGCAGAAAGAAACAACCAGTGAATCTGATAGAGCTTTTG GAAGCAACAACACCCATTTCAAAAGGATTTGAAGGGATTGCAGAGTTCGACAGCAACAAG GTGGCTTCTCTGGCCCACGGAGAACCGCCCAATTGTTGGGCTCTCCCGCTTGTAACACTC ACAAGTATTGCTGTTGCACTTCCCGACATCAAGCCCTCCTCCCTGAAGAAGTTACTCAAT GCTGTCAACGAGGCACTGGAATATGTCAACAAGTTTGAATGCGTCCTGGATACCGGAGGA GAGTCAGTTAACCTCAGGAAAGCTGCTGAGGTCGTTTGGCTAGGTGTTGATCTCTATCAC AAGTGGTTTGATGTGGATCTTCGGAAACTATCAAAGCAACAAAGAAATCCAGAAGAAACC CTTCGGGAGCTGATGGAAATCGCGAAGAAAGAGTTCTCAGAGTCATGGCAGATGAACCTG ATGGTATGCATGAAGCACAAGCCCTCTCACTGGCCCATCAAGACTCTAGCAGCCAACTCC ATGTACCGAATCTGTCAAACAATTCTACTAACTTACGAATCAAGAGACTATGGAACAGGG GAAGCTCTGTTGAGAAAGCTGGAAAGCACAATATCAGACATAGTGTCAGGTTGCTTTTGC AACGTAGCACAAGTGATATCCGTCAAGTGTTTGGTGTCAGCTGTAGAAGTAAGGGAAGAA TCAGTAAGAGGAGCAGCTCTGCATCTGGGAAGAACAGAGAAGATTCTAGAGATCTTAGAG AGAAGAAGGTTACCTAAATTGAGATGTGATCAGATGAAGAACATCGACGAATGGAGAGCA TTCTACAAGATTAACTCTTGCGAATGTGATAATAACAACAAGACAGTTTATCCCGACTCG GACGAACTGCGCCTCACTGTTGAGTAG

Peptide Sequence

PEP ID	AT5G47580.1
PEP Infomation	\| transmembrane protein \| Chr5:19294948-19297194 REVERSE LENGTH=748 \| 201606
Sequence	MGILGCDAHGDLNDAEFSKPLPSIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFS LNATSLTFIAVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLM NLMALGILVITDVVNICIQLGTGAIYVFSEEHFLVVLLMLLMLMILCFSATTVPTTKRIL ESKYNKRYDVAMKCPLATERTVAKKIQQDLSKFWMMAHTSSPQFVMARSVTCTASGFFCL LSAITLGEAMVRSYFLRPRSLGFCHGDSDYKWSTSLVLVCQTTTVAIGTIAPAIRWFTAV NFRCPIRGKKYYRDEFRIESYWTHWFSEKKQHPLSLWILKERRYRKTAHNAKRWILDVCI VIQYVIVFGSKIIRYISVSCVGKILLCCHFALRTSNTITHSESEKSDSNPSSRQDLASFV LHLEGEDPLVDVMVRSNREATDHWIEKGRKKQPVNLIELLEATTPISKGFEGIAEFDSNK VASLAHGEPPNCWALPLVTLTSIAVALPDIKPSSLKKLLNAVNEALEYVNKFECVLDTGG ESVNLRKAAEVVWLGVDLYHKWFDVDLRKLSKQQRNPEETLRELMEIAKKEFSESWQMNL MVCMKHKPSHWPIKTLAANSMYRICQTILLTYESRDYGTGEALLRKLESTISDIVSGCFC NVAQVISVKCLVSAVEVREESVRGAALHLGRTEKILEILERRRLPKLRCDQMKNIDEWRA FYKINSCECDNNNKTVYPDSDELRLTVE

Transcript Sequence

Transcript ID	AT5G47580.1
Transcript Infomation	\| transmembrane protein \| Chr5:19294813-19297424 REVERSE LENGTH=2612 \| 201606
Sequence	TCCCGTGAGTTTTTCCCGGTTGATCTGCGATTCAACAGTGTCTATCCGAAATTTAGTTGA AATGGTCATAGAAGAGTGTAGTAGAAAGGTTGGAATTTGTGCTCAAAATCGGTCAGAGAA GTCAAAGTTTGCTACTTTTCCAGTCTCTAGAATGATGTCAACAAGATCACTCATTTCCAT GGAGTCAACTTGAAGAAGAGCTTTTTCGATCAAATCCTTGAATTCGATTGATGGGTATCC TCGGCTGCGACGCCCATGGCGATTTGAACGATGCAGAGTTCAGCAAACCCTTACCTTCGA TTGGTATCTACGTTGCCGTAGCTTCACTCATCTGTGGTCTAGCCATGGCCGCCGATCTTA TACACGGCTTCCGACACCGCAAATTCTGGTTTCCCTGTAAGTTCTTCTCTCTCAACGCCA CTTCTCTGACTTTCATCGCTGTCGGAATCAAACTCTCTGTGGATCTCAACACTTCCATGC CGAGTCGTCAGGATCAGTTAGCTAAACTCAGCAGCACCGTCTTTGTATGTACTGTGATGG GTAATTCGATGCCTTCTCTGGGTATTATGGACAACAATGATCTCCTCATGAATCTTATGG CTTTAGGGATTCTTGTCATCACTGATGTTGTTAACATCTGTATTCAGTTGGGTACTGGTG CGATTTATGTTTTCTCTGAGGAACATTTTCTGGTCGTACTTCTCATGCTTCTTATGCTTA TGATCTTGTGTTTCTCGGCCACCACAGTTCCCACTACGAAAAGAATCTTGGAGAGTAAGT ACAATAAGAGGTACGACGTTGCTATGAAGTGTCCTTTGGCTACAGAGAGAACAGTTGCTA AGAAAATTCAGCAAGATTTGTCAAAGTTTTGGATGATGGCTCATACTAGTAGCCCTCAAT TCGTGATGGCTCGTTCTGTCACGTGCACTGCTTCTGGTTTCTTCTGTCTCCTGAGTGCCA TTACGCTTGGTGAAGCTATGGTTAGGAGTTACTTTTTAAGACCAAGGTCACTTGGGTTCT GCCATGGAGATTCTGATTACAAATGGTCAACTTCTCTGGTTCTTGTTTGCCAGACTACTA CTGTAGCTATAGGGACCATTGCTCCTGCGATCAGATGGTTCACGGCTGTGAACTTCAGGT GTCCGATTAGAGGAAAGAAGTATTATAGAGATGAGTTTAGAATAGAGAGTTACTGGACAC ATTGGTTCTCAGAGAAGAAGCAACATCCCTTAAGCCTTTGGATCCTCAAAGAACGCAGAT ACAGGAAGACTGCACACAATGCAAAACGCTGGATATTGGATGTATGTATTGTGATACAGT ATGTGATTGTGTTTGGTAGCAAAATTATCCGTTACATCTCGGTATCCTGTGTGGGTAAGA TCTTGTTGTGCTGTCATTTCGCCTTAAGGACCAGTAATACTATCACACACAGTGAGTCAG AAAAATCCGATTCAAATCCAAGCTCGAGACAGGACCTAGCGAGTTTTGTCCTGCACCTTG AAGGAGAGGACCCGCTGGTGGATGTGATGGTGCGGAGCAACCGGGAAGCGACAGATCATT GGATAGAGAAGGGCAGAAAGAAACAACCAGTGAATCTGATAGAGCTTTTGGAAGCAACAA CACCCATTTCAAAAGGATTTGAAGGGATTGCAGAGTTCGACAGCAACAAGGTGGCTTCTC TGGCCCACGGAGAACCGCCCAATTGTTGGGCTCTCCCGCTTGTAACACTCACAAGTATTG CTGTTGCACTTCCCGACATCAAGCCCTCCTCCCTGAAGAAGTTACTCAATGCTGTCAACG AGGCACTGGAATATGTCAACAAGTTTGAATGCGTCCTGGATACCGGAGGAGAGTCAGTTA ACCTCAGGAAAGCTGCTGAGGTCGTTTGGCTAGGTGTTGATCTCTATCACAAGTGGTTTG ATGTGGATCTTCGGAAACTATCAAAGCAACAAAGAAATCCAGAAGAAACCCTTCGGGAGC TGATGGAAATCGCGAAGAAAGAGTTCTCAGAGTCATGGCAGATGAACCTGATGGTATGCA TGAAGCACAAGCCCTCTCACTGGCCCATCAAGACTCTAGCAGCCAACTCCATGTACCGAA TCTGTCAAACAATTCTACTAACTTACGAATCAAGAGACTATGGAACAGGGGAAGCTCTGT TGAGAAAGCTGGAAAGCACAATATCAGACATAGTGTCAGGTTGCTTTTGCAACGTAGCAC AAGTGATATCCGTCAAGTGTTTGGTGTCAGCTGTAGAAGTAAGGGAAGAATCAGTAAGAG GAGCAGCTCTGCATCTGGGAAGAACAGAGAAGATTCTAGAGATCTTAGAGAGAAGAAGGT TACCTAAATTGAGATGTGATCAGATGAAGAACATCGACGAATGGAGAGCATTCTACAAGA TTAACTCTTGCGAATGTGATAATAACAACAAGACAGTTTATCCCGACTCGGACGAACTGC GCCTCACTGTTGAGTAGTTTATAGATATGTTAAAGGTTGTAGCTTTTTCTGTTTTTGTAC CTTTGTGTATTCACCACATGAATCTCTTTGTATATAGTAAGAATCTGAAGCTTTTTGACA CACTTGAAGTGTATGTGTTTGCTCATTTCGTT