Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G47400.1
CDS Infomation	\| sphingomyelin phosphodiesterase \| Chr5:19229162-19232586 FORWARD LENGTH=2589 \| 201606
Sequence	ATGCCACGTGGCACGTTCGCTTTCTTTTTCTTCCTCGTGTTGATTTTTTTTCTTCTCTTT TGTCCCTCTTTGGTTTTTCTTTTCCCCTTCACAAGGCGCGATTTGAGTCGCCTCGCATTT CAAACCCTTCTTCTCCGGCGTAAACCTTTGCTCTATCTCTCGATAAAAACCCTTGTTTCG TTTTCACCTTCGTATTTAGCGATGCTTCCACACTCCTACACCGTCGATTCGCTTTCGCAA TCACAAGACCTAGCTTCAGCTATACTCTCAGCTTCCACGCCGTCGAGTATCTCCGCTGCT TGCTCTTCCGTCGAATCGTTTCTTCAGTCGCATACGCCTGATCAGTGTCGCCATTTCTTC TCTGTTACTTTTCCGAGTTTAATCTGTAAGATCTTCGGTTTCGGCGACACGACCGCGGCA TCTCCGGCACAGTCTTCTTCGCTGCGACCGAACGGTTGGATCGATGTAATCTCGGCGGCC AACGATTTGGATTTAGCGGAGAGAGTATACAATCTCTTATCCCCTAGTGGAATACTCATG AGCTCAATCTTCGCTGTTGATAAATTAGCTCTTGTTAAGTATGTTTTCCCGACGGAACGT TTACCGGAGTATGCTAGATTCATGCTCTCCAGCGAGAAGGATCGAATTGCGTTATCGAAT CTGTGCCCCTTTTTGAAAGGTAAAATTGAGGAGGATTCAGTTCGTGGTTCATTGTGTGAA GTTAGGCTAAATGTTTTTGAGTATTACATGTTTTGGCTCTCTTATTATCCAGTTTGTAGA GGAAACAATGAGATTTCAGCTGTGAATCTGAATCCTATCCAAAAGAGAAACAAGTTTAGG CTAGAGAATTGGACACTTATCAAAGGTTTTCCAGGGAGTAACAAGCGTGATTCTGATCAG AAATTGGAGTGTAATCTCTACATAAGGCTTCTTTACTCTTATTTGAAAGCATTTGTTCCT GTTTTCGACTTAAACGCTCACCAGCCTTATCGTAGTTCTCTTTTGCATTACGGAAATGGG TATGATGGGTCAGTGATGACAAGAGCTGAGTTCTTGGTGAATGTTTTCGTGCATTATTGG CTTGTTGAGAATGACTTCTCACCATTTCCTGTTGTTACGGCTAAATCTTTTGGTGTGGCT CCTCCTTTCCGTTCTGCTGTGGAGGAGATTCCACCTACTTGTGGGTTGGAAGAAGTAGTG AAGTTGCTTGTCAAGTATCTGAATTTGAGTTGGGTTACAAGTGGTGTTGGGAGTGAAAAC TACATTGAGTATGGCGAGAGTCCACGGTGGAAGACACCGACTTCAGGATCGTCATCCCAT GTCGCGAATTTGAGCCTCAGGCCGCTCACTTCCTGGAACACCCATTTACAGAGGCCGCTT TATCGTTATATATTGAGGAGTTTCTTGTTCTGTCCCATAGGAAGCTCAATTAAGAATGCA TCTCAGGTGTTCTCCATCTGGGTTACGTACCTGGAACCATGGATGATCAGTTTGGATGAT TTCTCAGTTTTTGAACCTGCTTTAAGTGGATCTGTAAAAGATATGAAAAAGGAAGATTCT TATGAATCACGCGTTTGTGGATACACGCCTTTGTGGCAGAGCTATGTGATATCCAATTAT CTCTACTATAGTTCTCTGGTCATGCATTTTATTGGCTTTGCACACAAGTTCCTTCACACA GATCCAGAAATAATAACTCAGATGGCTCTTAAGGTGATGAGTACGTTGACATCGTCAAAA GAGCTTTTGGTTCTGATGAAGAATATTGATAAAGCCTTTCACTCTAAACAAACTGGACCA GGAAACTCAAAAGTGAACGAATTGTCTAGATTTTCTCCATCTATCCGTGAGCAGTTGAAG GATTGGGAAGATGGGTTGTGTGAGAGCAACGCTGATGGCTCATACTTGCATGAAAACTGG AACAAAGACTTGAAACTCTTTAGTGATGGTGAAGATGGCGGACAACAACTGCTTCAGCTA TTCATACTGCGGGCAGAAGCCGAACTGCAAACTGTATCCGATAAAAACCTCACAGAGGCC CTTAAGTGTGTAGATTCACTAAAATCAGCGGTTTCCAACTTCTTTGGCGGGCATGTCGTA AAACCAATCGCTTTTTTCCTAGAGCCGGACCATCCTCAGAAAAACCGTGACGAGCTCTTC AAGCCACGTGGTGCTGGTAACCAAACAGCAGGCGGTGTGAAGTACAAAGGGGACTGGATG ACCCGTCCGGTGTCAGAAGACGAGGTTGCATTGATGGCTAAACTGCTAATCAACATGTCT ATTTGGCTCAATGAACGCCTCGGGCTGAACAAATCTGAGACGAGCAACGACAAGAAAGAG AATTCAGAGTCAGTATCATATGTAGATGTATCAGGGGAAGATGTGGGAAACGTTGCAGGA CCTGGAGATGCTGCGAAGATGCTGTTGCGAGGGATGGTGATGGTATGTGGCACAGTGTTG CAGCTGATGAGAAGATTCGGGATTCGAGTCAATCTTCGGGTTATGGCTTCAAAAAAGTTT CTGATGCTTTTATTTCTCTATGTCCTGTTTCTTGTAGTCAAAAGGGTAGTCACAAGGATG ATTTGGTAG

Peptide Sequence

PEP ID	AT5G47400.1
PEP Infomation	\| sphingomyelin phosphodiesterase \| Chr5:19229162-19232586 FORWARD LENGTH=862 \| 201606
Sequence	MPRGTFAFFFFLVLIFFLLFCPSLVFLFPFTRRDLSRLAFQTLLLRRKPLLYLSIKTLVS FSPSYLAMLPHSYTVDSLSQSQDLASAILSASTPSSISAACSSVESFLQSHTPDQCRHFF SVTFPSLICKIFGFGDTTAASPAQSSSLRPNGWIDVISAANDLDLAERVYNLLSPSGILM SSIFAVDKLALVKYVFPTERLPEYARFMLSSEKDRIALSNLCPFLKGKIEEDSVRGSLCE VRLNVFEYYMFWLSYYPVCRGNNEISAVNLNPIQKRNKFRLENWTLIKGFPGSNKRDSDQ KLECNLYIRLLYSYLKAFVPVFDLNAHQPYRSSLLHYGNGYDGSVMTRAEFLVNVFVHYW LVENDFSPFPVVTAKSFGVAPPFRSAVEEIPPTCGLEEVVKLLVKYLNLSWVTSGVGSEN YIEYGESPRWKTPTSGSSSHVANLSLRPLTSWNTHLQRPLYRYILRSFLFCPIGSSIKNA SQVFSIWVTYLEPWMISLDDFSVFEPALSGSVKDMKKEDSYESRVCGYTPLWQSYVISNY LYYSSLVMHFIGFAHKFLHTDPEIITQMALKVMSTLTSSKELLVLMKNIDKAFHSKQTGP GNSKVNELSRFSPSIREQLKDWEDGLCESNADGSYLHENWNKDLKLFSDGEDGGQQLLQL FILRAEAELQTVSDKNLTEALKCVDSLKSAVSNFFGGHVVKPIAFFLEPDHPQKNRDELF KPRGAGNQTAGGVKYKGDWMTRPVSEDEVALMAKLLINMSIWLNERLGLNKSETSNDKKE NSESVSYVDVSGEDVGNVAGPGDAAKMLLRGMVMVCGTVLQLMRRFGIRVNLRVMASKKF LMLLFLYVLFLVVKRVVTRMIW

Transcript Sequence

Transcript ID	AT5G47400.1
Transcript Infomation	\| sphingomyelin phosphodiesterase \| Chr5:19229162-19232743 FORWARD LENGTH=2746 \| 201606
Sequence	ATGCCACGTGGCACGTTCGCTTTCTTTTTCTTCCTCGTGTTGATTTTTTTTCTTCTCTTT TGTCCCTCTTTGGTTTTTCTTTTCCCCTTCACAAGGCGCGATTTGAGTCGCCTCGCATTT CAAACCCTTCTTCTCCGGCGTAAACCTTTGCTCTATCTCTCGATAAAAACCCTTGTTTCG TTTTCACCTTCGTATTTAGCGATGCTTCCACACTCCTACACCGTCGATTCGCTTTCGCAA TCACAAGACCTAGCTTCAGCTATACTCTCAGCTTCCACGCCGTCGAGTATCTCCGCTGCT TGCTCTTCCGTCGAATCGTTTCTTCAGTCGCATACGCCTGATCAGTGTCGCCATTTCTTC TCTGTTACTTTTCCGAGTTTAATCTGTAAGATCTTCGGTTTCGGCGACACGACCGCGGCA TCTCCGGCACAGTCTTCTTCGCTGCGACCGAACGGTTGGATCGATGTAATCTCGGCGGCC AACGATTTGGATTTAGCGGAGAGAGTATACAATCTCTTATCCCCTAGTGGAATACTCATG AGCTCAATCTTCGCTGTTGATAAATTAGCTCTTGTTAAGTATGTTTTCCCGACGGAACGT TTACCGGAGTATGCTAGATTCATGCTCTCCAGCGAGAAGGATCGAATTGCGTTATCGAAT CTGTGCCCCTTTTTGAAAGGTAAAATTGAGGAGGATTCAGTTCGTGGTTCATTGTGTGAA GTTAGGCTAAATGTTTTTGAGTATTACATGTTTTGGCTCTCTTATTATCCAGTTTGTAGA GGAAACAATGAGATTTCAGCTGTGAATCTGAATCCTATCCAAAAGAGAAACAAGTTTAGG CTAGAGAATTGGACACTTATCAAAGGTTTTCCAGGGAGTAACAAGCGTGATTCTGATCAG AAATTGGAGTGTAATCTCTACATAAGGCTTCTTTACTCTTATTTGAAAGCATTTGTTCCT GTTTTCGACTTAAACGCTCACCAGCCTTATCGTAGTTCTCTTTTGCATTACGGAAATGGG TATGATGGGTCAGTGATGACAAGAGCTGAGTTCTTGGTGAATGTTTTCGTGCATTATTGG CTTGTTGAGAATGACTTCTCACCATTTCCTGTTGTTACGGCTAAATCTTTTGGTGTGGCT CCTCCTTTCCGTTCTGCTGTGGAGGAGATTCCACCTACTTGTGGGTTGGAAGAAGTAGTG AAGTTGCTTGTCAAGTATCTGAATTTGAGTTGGGTTACAAGTGGTGTTGGGAGTGAAAAC TACATTGAGTATGGCGAGAGTCCACGGTGGAAGACACCGACTTCAGGATCGTCATCCCAT GTCGCGAATTTGAGCCTCAGGCCGCTCACTTCCTGGAACACCCATTTACAGAGGCCGCTT TATCGTTATATATTGAGGAGTTTCTTGTTCTGTCCCATAGGAAGCTCAATTAAGAATGCA TCTCAGGTGTTCTCCATCTGGGTTACGTACCTGGAACCATGGATGATCAGTTTGGATGAT TTCTCAGTTTTTGAACCTGCTTTAAGTGGATCTGTAAAAGATATGAAAAAGGAAGATTCT TATGAATCACGCGTTTGTGGATACACGCCTTTGTGGCAGAGCTATGTGATATCCAATTAT CTCTACTATAGTTCTCTGGTCATGCATTTTATTGGCTTTGCACACAAGTTCCTTCACACA GATCCAGAAATAATAACTCAGATGGCTCTTAAGGTGATGAGTACGTTGACATCGTCAAAA GAGCTTTTGGTTCTGATGAAGAATATTGATAAAGCCTTTCACTCTAAACAAACTGGACCA GGAAACTCAAAAGTGAACGAATTGTCTAGATTTTCTCCATCTATCCGTGAGCAGTTGAAG GATTGGGAAGATGGGTTGTGTGAGAGCAACGCTGATGGCTCATACTTGCATGAAAACTGG AACAAAGACTTGAAACTCTTTAGTGATGGTGAAGATGGCGGACAACAACTGCTTCAGCTA TTCATACTGCGGGCAGAAGCCGAACTGCAAACTGTATCCGATAAAAACCTCACAGAGGCC CTTAAGTGTGTAGATTCACTAAAATCAGCGGTTTCCAACTTCTTTGGCGGGCATGTCGTA AAACCAATCGCTTTTTTCCTAGAGCCGGACCATCCTCAGAAAAACCGTGACGAGCTCTTC AAGCCACGTGGTGCTGGTAACCAAACAGCAGGCGGTGTGAAGTACAAAGGGGACTGGATG ACCCGTCCGGTGTCAGAAGACGAGGTTGCATTGATGGCTAAACTGCTAATCAACATGTCT ATTTGGCTCAATGAACGCCTCGGGCTGAACAAATCTGAGACGAGCAACGACAAGAAAGAG AATTCAGAGTCAGTATCATATGTAGATGTATCAGGGGAAGATGTGGGAAACGTTGCAGGA CCTGGAGATGCTGCGAAGATGCTGTTGCGAGGGATGGTGATGGTATGTGGCACAGTGTTG CAGCTGATGAGAAGATTCGGGATTCGAGTCAATCTTCGGGTTATGGCTTCAAAAAAGTTT CTGATGCTTTTATTTCTCTATGTCCTGTTTCTTGTAGTCAAAAGGGTAGTCACAAGGATG ATTTGGTAGATGGGTGTCCAAAATGTGTTAAAAGTTGAAGAAGTAAAAGGAAATAGACAC TCTAACTCGCGTAGAGCGTTTGATAGGAATTGGAAAGCTTATTTACGAAACAGGGACTGA GTTTTTTGGTAATTTACATGTTCGCATTACAAATTGAAGCGTGTCT