Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G46580.1
CDS Infomation	\| pentatricopeptide (PPR) repeat-containing protein \| Chr5:18897510-18899645 REVERSE LENGTH=2136 \| 201606
Sequence	ATGGCGACTGTTCTTACCACAGCCATTGATGTCTGCTTCAATCCCCAAAATTCAGACACA AAGAAACACAGTCTATTCTTAAAGCCTTCTCTTTTCAGACAATCTCGTTCCAGAAAGCTT AACATTTCTTGCAGTTCCTTGAAACAACCTAAAACCCTAGAAGAAGAACCAATCACCACA AAAACCCCATCTCTCTCTGAGCAACTCAAGCCTCTCTCTGCAACAACACTCAGACAAGAG CAAACTCAAATCTTGTCTAAACCGAAATCTGTCTGGGTCAATCCAACAAGACCCAAAAGG TCAGTTCTTTCACTTCAGAGACAAAAGCGTTCTGCTTACTCTTACAATCCTCAAATCAAG GATCTTAGGGCTTTTGCTCTGAAGCTCAATAGTTCTATTTTCACTGAAAAGTCTGAGTTT TTATCTCTTCTCGATGAGATTCCTCATCCACCCAATAGAGATAACGCATTGCTTGTGCTA AACAGCTTAAGAGAATGGCAAAAGACTCATACTTTCTTTAATTGGGTTAAATCCAAGAGT CTGTTTCCTATGGAAACTATATTTTACAATGTTACAATGAAGTCTCTGAGATTTGGGAGG CAATTTCAGCTTATTGAGGAGATGGCACTTGAAATGGTGAAGGATGGTGTTGAGCTTGAT AACATTACTTATTCGACAATCATCACTTGTGCTAAAAGGTGCAATCTTTACAACAAAGCT ATTGAGTGGTTTGAGAGAATGTATAAAACAGGTCTGATGCCTGATGAGGTCACTTACTCA GCAATTCTTGATGTTTATTCCAAGTCAGGAAAAGTTGAGGAGGTTCTTAGTTTGTACGAA AGAGCGGTGGCTACGGGTTGGAAACCTGATGCTATAGCGTTCTCTGTGTTGGGGAAAATG TTTGGTGAAGCTGGAGATTATGATGGGATTAGGTATGTTTTGCAAGAGATGAAATCTATG GATGTGAAGCCTAATGTTGTTGTGTATAATACTTTGTTGGAAGCTATGGGGAGAGCAGGG AAACCGGGTTTGGCGAGGAGTTTGTTTAATGAGATGCTTGAGGCAGGTTTAACTCCAAAT GAGAAAACTTTGACAGCTCTTGTAAAGATTTATGGAAAAGCGAGGTGGGCGAGAGATGCT CTTCAGTTGTGGGAGGAAATGAAGGCAAAGAAGTGGCCGATGGATTTCATTTTGTACAAT ACGTTGTTGAATATGTGTGCTGATATTGGATTGGAGGAAGAAGCAGAGAGGCTGTTTAAT GATATGAAGGAGTCTGTGCAATGTAGACCTGATAATTTTAGTTACACAGCAATGCTGAAT ATATATGGGAGTGGTGGAAAAGCCGAAAAGGCGATGGAGTTGTTTGAAGAGATGTTGAAA GCTGGGGTTCAGGTTAATGTAATGGGATGCACTTGTTTAGTACAATGCTTAGGGAAAGCT AAAAGGATTGATGATGTGGTTTATGTGTTTGATCTCTCGATTAAAAGGGGAGTTAAGCCT GACGATAGGCTCTGTGGGTGTCTGCTTTCAGTTATGGCCTTGTGTGAGAGTAGTGAAGAT GCTGAAAAGGTTATGGCTTGTTTGGAGCGAGCTAATAAGAAGTTGGTGACATTTGTGAAT CTGATTGTAGATGAGAAAACCGAATATGAGACTGTAAAAGAAGAGTTCAAGTTAGTGATC AATGCAACCCAAGTAGAGGCAAGAAGGCCCTTCTGCAACTGTTTGATAGATATATGCAGA GGCAACAACCGGCATGAGAGAGCTCATGAGCTTCTCTACTTAGGAACACTTTTTGGTCTA TACCCGGGACTACACAACAAGACCATAAAAGAATGGAGCCTAGATGTGAGGTCATTATCA GTTGGTGCAGCTGAGACCGCTCTCGAAGAGTGGATGAGAACACTTGCCAACATCATTAAA CGCCAAGAGGAACTTCCTGAGCTGTTTTTGGCGCAAACTGGGACAGGAACTCACAGATTC TCACAGGGATTAGCAAACTCTTTCGCCTTGCATTTGCAACAACTCTCTGCACCATTTAGA CAGAGCGATAGGCCAGGTATCTTTGTGGCTACAAAGGAGGATTTGGTGTCATGGTTGGAA TCAAAGTTTCCACCTTTAGTTACTTCTCAAGCATGA

Peptide Sequence

PEP ID	AT5G46580.1
PEP Infomation	\| pentatricopeptide (PPR) repeat-containing protein \| Chr5:18897510-18899645 REVERSE LENGTH=711 \| 201606
Sequence	MATVLTTAIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLKQPKTLEEEPITT KTPSLSEQLKPLSATTLRQEQTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAYSYNPQIK DLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKSKS LFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKA IEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKM FGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPN EKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFN DMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKA KRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVN LIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGL YPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTHRF SQGLANSFALHLQQLSAPFRQSDRPGIFVATKEDLVSWLESKFPPLVTSQA

Transcript Sequence

Transcript ID	AT5G46580.1
Transcript Infomation	\| pentatricopeptide (PPR) repeat-containing protein \| Chr5:18897445-18899646 REVERSE LENGTH=2202 \| 201606
Sequence	AATGGCGACTGTTCTTACCACAGCCATTGATGTCTGCTTCAATCCCCAAAATTCAGACAC AAAGAAACACAGTCTATTCTTAAAGCCTTCTCTTTTCAGACAATCTCGTTCCAGAAAGCT TAACATTTCTTGCAGTTCCTTGAAACAACCTAAAACCCTAGAAGAAGAACCAATCACCAC AAAAACCCCATCTCTCTCTGAGCAACTCAAGCCTCTCTCTGCAACAACACTCAGACAAGA GCAAACTCAAATCTTGTCTAAACCGAAATCTGTCTGGGTCAATCCAACAAGACCCAAAAG GTCAGTTCTTTCACTTCAGAGACAAAAGCGTTCTGCTTACTCTTACAATCCTCAAATCAA GGATCTTAGGGCTTTTGCTCTGAAGCTCAATAGTTCTATTTTCACTGAAAAGTCTGAGTT TTTATCTCTTCTCGATGAGATTCCTCATCCACCCAATAGAGATAACGCATTGCTTGTGCT AAACAGCTTAAGAGAATGGCAAAAGACTCATACTTTCTTTAATTGGGTTAAATCCAAGAG TCTGTTTCCTATGGAAACTATATTTTACAATGTTACAATGAAGTCTCTGAGATTTGGGAG GCAATTTCAGCTTATTGAGGAGATGGCACTTGAAATGGTGAAGGATGGTGTTGAGCTTGA TAACATTACTTATTCGACAATCATCACTTGTGCTAAAAGGTGCAATCTTTACAACAAAGC TATTGAGTGGTTTGAGAGAATGTATAAAACAGGTCTGATGCCTGATGAGGTCACTTACTC AGCAATTCTTGATGTTTATTCCAAGTCAGGAAAAGTTGAGGAGGTTCTTAGTTTGTACGA AAGAGCGGTGGCTACGGGTTGGAAACCTGATGCTATAGCGTTCTCTGTGTTGGGGAAAAT GTTTGGTGAAGCTGGAGATTATGATGGGATTAGGTATGTTTTGCAAGAGATGAAATCTAT GGATGTGAAGCCTAATGTTGTTGTGTATAATACTTTGTTGGAAGCTATGGGGAGAGCAGG GAAACCGGGTTTGGCGAGGAGTTTGTTTAATGAGATGCTTGAGGCAGGTTTAACTCCAAA TGAGAAAACTTTGACAGCTCTTGTAAAGATTTATGGAAAAGCGAGGTGGGCGAGAGATGC TCTTCAGTTGTGGGAGGAAATGAAGGCAAAGAAGTGGCCGATGGATTTCATTTTGTACAA TACGTTGTTGAATATGTGTGCTGATATTGGATTGGAGGAAGAAGCAGAGAGGCTGTTTAA TGATATGAAGGAGTCTGTGCAATGTAGACCTGATAATTTTAGTTACACAGCAATGCTGAA TATATATGGGAGTGGTGGAAAAGCCGAAAAGGCGATGGAGTTGTTTGAAGAGATGTTGAA AGCTGGGGTTCAGGTTAATGTAATGGGATGCACTTGTTTAGTACAATGCTTAGGGAAAGC TAAAAGGATTGATGATGTGGTTTATGTGTTTGATCTCTCGATTAAAAGGGGAGTTAAGCC TGACGATAGGCTCTGTGGGTGTCTGCTTTCAGTTATGGCCTTGTGTGAGAGTAGTGAAGA TGCTGAAAAGGTTATGGCTTGTTTGGAGCGAGCTAATAAGAAGTTGGTGACATTTGTGAA TCTGATTGTAGATGAGAAAACCGAATATGAGACTGTAAAAGAAGAGTTCAAGTTAGTGAT CAATGCAACCCAAGTAGAGGCAAGAAGGCCCTTCTGCAACTGTTTGATAGATATATGCAG AGGCAACAACCGGCATGAGAGAGCTCATGAGCTTCTCTACTTAGGAACACTTTTTGGTCT ATACCCGGGACTACACAACAAGACCATAAAAGAATGGAGCCTAGATGTGAGGTCATTATC AGTTGGTGCAGCTGAGACCGCTCTCGAAGAGTGGATGAGAACACTTGCCAACATCATTAA ACGCCAAGAGGAACTTCCTGAGCTGTTTTTGGCGCAAACTGGGACAGGAACTCACAGATT CTCACAGGGATTAGCAAACTCTTTCGCCTTGCATTTGCAACAACTCTCTGCACCATTTAG ACAGAGCGATAGGCCAGGTATCTTTGTGGCTACAAAGGAGGATTTGGTGTCATGGTTGGA ATCAAAGTTTCCACCTTTAGTTACTTCTCAAGCATGAAGTATCATCATCTGTTATCCTAA ACTAAAAAGCAACATTATTTTTCCCAGTAAAGTTGTTTATAA