Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G46460.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:18840305-18842398 FORWARD LENGTH=2094 \| 201606
Sequence	ATGTGGAGTCGTGCCATTTTTCAACGATTCAGGTTTCGAGCTTTCTCTATATCTCACGTT ATCCATGGGAAATGTTACAGAAGTTTCTCAGTTACTGTGGAGTTTCAGAATCGCGAGGTT TTGATATGTAATCACTTGTTGAGTCGACGAATCGATGAGGCTCGAGAGGTTTTCAATCAG GTTCCATCTCCTCATGTGAGTCTTTACACAAAGATGATTACGGGATACACGAGGAGTAAT AGATTGGTTGATGCGTTGAATCTGTTCGACGAAATGCCTGTGAGAGATGTTGTATCATGG AATTCGATGATCAGTGGTTGTGTGGAGTGTGGTGATATGAATACTGCAGTGAAGCTGTTC GATGAAATGCCTGAGAGAAGCGTGGTTTCATGGACAGCGATGGTAAATGGGTGTTTTAGG TCTGGTAAGGTTGATCAAGCGGAGAGATTGTTTTATCAAATGCCTGTGAAAGATACTGCA GCGTGGAATTCGATGGTTCATGGGTATTTACAGTTTGGTAAAGTAGACGATGCCTTGAAG TTGTTTAAGCAAATGCCTGGGAAGAATGTGATTTCGTGGACGACAATGATCTGTGGGTTA GACCAGAATGAGAGGAGTGGAGAGGCTCTCGATTTGTTCAAGAACATGTTGCGTTGTTGC ATAAAATCGACTTCAAGACCATTCACTTGCGTAATCACCGCTTGCGCGAATGCTCCAGCG TTTCATATGGGGATACAAGTTCATGGCTTGATCATCAAGTTGGGGTTTTTATATGAAGAA TATGTATCTGCTTCGCTCATAACTTTTTATGCAAACTGCAAAAGAATAGGGGATTCTCGG AAGGTGTTTGACGAGAAGGTTCATGAACAAGTTGCTGTGTGGACTGCTCTATTGTCAGGT TATAGTCTGAACAAAAAGCACGAAGATGCGTTGAGTATATTCTCCGGGATGTTAAGAAAC AGTATCTTACCAAATCAATCAACATTTGCTAGCGGATTAAACTCTTGCTCTGCTTTGGGA ACATTGGATTGGGGTAAGGAGATGCATGGAGTTGCTGTGAAGCTTGGTTTAGAAACTGAT GCCTTTGTGGGTAATTCTCTTGTTGTGATGTACAGCGATTCTGGAAACGTTAATGATGCC GTTTCAGTGTTCATAAAAATCTTCAAGAAGAGCATTGTGTCATGGAATTCCATTATTGTT GGCTGCGCGCAGCATGGGCGTGGAAAGTGGGCGTTTGTCATATTTGGTCAAATGATACGC CTAAACAAAGAGCCAGATGAGATCACTTTCACTGGCTTACTCTCTGCTTGTAGCCATTGC GGGTTCCTAGAGAAAGGAAGAAAGCTGTTCTATTACATGTCAAGTGGAATAAATCATATC GATAGAAAGATTCAACACTACACTTGTATGGTTGATATCTTGGGAAGATGCGGAAAATTG AAAGAAGCAGAAGAACTTATCGAGAGAATGGTTGTGAAACCTAATGAAATGGTTTGGTTG GCTTTACTTAGTGCTTGTAGGATGCATTCTGATGTAGACAGAGGCGAGAAAGCTGCTGCA GCCATTTTTAATCTGGACTCAAAATCAAGCGCTGCTTATGTCTTATTGTCAAATATATAT GCTTCTGCTGGTAGATGGTCGAATGTATCAAAATTGAGAGTTAAGATGAAGAAGAATGGG ATTATGAAGAAACCCGGGAGCAGTTGGGTTGTTATTAGAGGGAAAAAGCACGAATTTTTC TCCGGTGATCAACCACATTGCTCGAGGATATATGAGAAGTTGGAGTTTCTGAGAGAGAAG TTGAAGGAACTGGGCTATGCTCCTGATTATAGATCCGCTTTACATGACGTTGAAGATGAA CAGAAAGAAGAGATGTTGTGGTACCACAGTGAGAGGCTTGCTATTGCTTTTGGGTTGATT AATACAGTTGAAGGAAGTGCAGTCACAGTGATGAAGAATCTACGGGTTTGTGAAGATTGT CACACAGTGATTAAGTTAATCTCCGGAGTTGTGGGACGTGAGATTGTTTTAAGGGATCCG ATTCGGTTTCATCATTTCAAGAATGGGACGTGTTCTTGTGGGGATTATTGGTAG

Peptide Sequence

PEP ID	AT5G46460.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:18840305-18842398 FORWARD LENGTH=697 \| 201606
Sequence	MWSRAIFQRFRFRAFSISHVIHGKCYRSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQ VPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLF DEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALK LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA FHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSG YSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETD AFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR LNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKL KEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY ASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSRIYEKLEFLREK LKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDC HTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW

Transcript Sequence

Transcript ID	AT5G46460.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr5:18840196-18842479 FORWARD LENGTH=2284 \| 201606
Sequence	GTCGGAAAGTTCAAAACTTTTTTGACTCTGGAACTTTGCCGTTCTATACACGAAGCTACA TTGAGTGTGGCTTTGTGATTGTTTTACGCTGATGTGACCGTTGTAGGAAATGTGGAGTCG TGCCATTTTTCAACGATTCAGGTTTCGAGCTTTCTCTATATCTCACGTTATCCATGGGAA ATGTTACAGAAGTTTCTCAGTTACTGTGGAGTTTCAGAATCGCGAGGTTTTGATATGTAA TCACTTGTTGAGTCGACGAATCGATGAGGCTCGAGAGGTTTTCAATCAGGTTCCATCTCC TCATGTGAGTCTTTACACAAAGATGATTACGGGATACACGAGGAGTAATAGATTGGTTGA TGCGTTGAATCTGTTCGACGAAATGCCTGTGAGAGATGTTGTATCATGGAATTCGATGAT CAGTGGTTGTGTGGAGTGTGGTGATATGAATACTGCAGTGAAGCTGTTCGATGAAATGCC TGAGAGAAGCGTGGTTTCATGGACAGCGATGGTAAATGGGTGTTTTAGGTCTGGTAAGGT TGATCAAGCGGAGAGATTGTTTTATCAAATGCCTGTGAAAGATACTGCAGCGTGGAATTC GATGGTTCATGGGTATTTACAGTTTGGTAAAGTAGACGATGCCTTGAAGTTGTTTAAGCA AATGCCTGGGAAGAATGTGATTTCGTGGACGACAATGATCTGTGGGTTAGACCAGAATGA GAGGAGTGGAGAGGCTCTCGATTTGTTCAAGAACATGTTGCGTTGTTGCATAAAATCGAC TTCAAGACCATTCACTTGCGTAATCACCGCTTGCGCGAATGCTCCAGCGTTTCATATGGG GATACAAGTTCATGGCTTGATCATCAAGTTGGGGTTTTTATATGAAGAATATGTATCTGC TTCGCTCATAACTTTTTATGCAAACTGCAAAAGAATAGGGGATTCTCGGAAGGTGTTTGA CGAGAAGGTTCATGAACAAGTTGCTGTGTGGACTGCTCTATTGTCAGGTTATAGTCTGAA CAAAAAGCACGAAGATGCGTTGAGTATATTCTCCGGGATGTTAAGAAACAGTATCTTACC AAATCAATCAACATTTGCTAGCGGATTAAACTCTTGCTCTGCTTTGGGAACATTGGATTG GGGTAAGGAGATGCATGGAGTTGCTGTGAAGCTTGGTTTAGAAACTGATGCCTTTGTGGG TAATTCTCTTGTTGTGATGTACAGCGATTCTGGAAACGTTAATGATGCCGTTTCAGTGTT CATAAAAATCTTCAAGAAGAGCATTGTGTCATGGAATTCCATTATTGTTGGCTGCGCGCA GCATGGGCGTGGAAAGTGGGCGTTTGTCATATTTGGTCAAATGATACGCCTAAACAAAGA GCCAGATGAGATCACTTTCACTGGCTTACTCTCTGCTTGTAGCCATTGCGGGTTCCTAGA GAAAGGAAGAAAGCTGTTCTATTACATGTCAAGTGGAATAAATCATATCGATAGAAAGAT TCAACACTACACTTGTATGGTTGATATCTTGGGAAGATGCGGAAAATTGAAAGAAGCAGA AGAACTTATCGAGAGAATGGTTGTGAAACCTAATGAAATGGTTTGGTTGGCTTTACTTAG TGCTTGTAGGATGCATTCTGATGTAGACAGAGGCGAGAAAGCTGCTGCAGCCATTTTTAA TCTGGACTCAAAATCAAGCGCTGCTTATGTCTTATTGTCAAATATATATGCTTCTGCTGG TAGATGGTCGAATGTATCAAAATTGAGAGTTAAGATGAAGAAGAATGGGATTATGAAGAA ACCCGGGAGCAGTTGGGTTGTTATTAGAGGGAAAAAGCACGAATTTTTCTCCGGTGATCA ACCACATTGCTCGAGGATATATGAGAAGTTGGAGTTTCTGAGAGAGAAGTTGAAGGAACT GGGCTATGCTCCTGATTATAGATCCGCTTTACATGACGTTGAAGATGAACAGAAAGAAGA GATGTTGTGGTACCACAGTGAGAGGCTTGCTATTGCTTTTGGGTTGATTAATACAGTTGA AGGAAGTGCAGTCACAGTGATGAAGAATCTACGGGTTTGTGAAGATTGTCACACAGTGAT TAAGTTAATCTCCGGAGTTGTGGGACGTGAGATTGTTTTAAGGGATCCGATTCGGTTTCA TCATTTCAAGAATGGGACGTGTTCTTGTGGGGATTATTGGTAGAACAGTGATTTGGAAAA TTTCAAGCTTTCACTTGTGATGTGGAAAGTGACTTGGGAATTTACATTAATACCTGATCT TACC