Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G46450.1
CDS Infomation	\| Disease resistance protein (TIR-NBS-LRR class) family \| Chr5:18835618-18839546 FORWARD LENGTH=3372 \| 201606
Sequence	ATGGCTTCTTCGTCCTCCTCTTCTCGCAATTGGTCATATGATGTTTTCCCAAGCTTCAGT GGAGAAGATGTCCGCAAAACATTCCTCAGCCACTTTCTCAGGGAGCTGGAACGGAAATCG ATCATTACTTTCAAAGACAATGAGATGGAGAGAAGCCAGTCAATAGCCCCAGAGCTTGTA GAGGCGATTAAAGATTCAAGGATTGCAGTGATTGTGTTCTCTAAAAACTACGCCTCTTCA AGCTGGTGTCTAAATGAGCTGTTAGAGATTATGCGATGCAACAAATATTTGGGCCAGCAA GTGATACCAGTCTTCTACTATTTGGATCCTTCTCATCTTCGGAAACAGTCGGGAGAGTTT GGAGAGGCATTTAAAAAGACTTGCCAGAACCAAACTGAGGAAGTGAAAAATCAGTGGAAG CAAGCGTTGACTGATGTTTCAAACATCCTCGGATATCATTCTAAGAACTGCAATAGCGAA GCTACAATGATTGAAGAAATCTCCAGTCATATTTTAGGTAAACTGAGTTTAACTCCATCA AATGATTTTGAGGAATTTGTTGGCATCAAAGATCATATCGAGAAGGTGAGGTTGTTGTTG CATTTGGAATCTGACGAAGTGAGGATGGTTGGGATATGGGGTACCTCGGGAATCGGTAAG ACTACCATTGCAAGAGCTTTATTTAGTAATCTCTCTAGTCAGTTTCAAAGTAGTGTTTAC ATAGACAGGGCTTTCATATCTAAGAGTATGGAAGGTTACGGTCGAGCCAATCCAGATGAC TATAACATGAAGTTGCGTTTGCGAGAAAATTTCCTGTTTGAAATTTTGGGCAAAAAGAAC ATGAAGATCGGTGCAATGGAAGAAAGGCTGAAGCATCAAAAAGTTCTTATCATTATTGAT GATTTGGATGATCAAGATGTGCTAGATGCCTTAGTGGGTAGAACTCAATGGTTTGGAAGT GGGAGTAGAATAATTGTGGTTACAAAAAACAAACATTTCTTAAGGGCCCATGGGATTGAT CATGTTTACGAGGCCTGTCTCCCATCTGAAGAACTTGCTCTTGAGATGTTTTGTCGATAT GCTTTCAGGAAGAATTCTCCACCTGATGGTTTTATGGAGCTTTCTTCTGAAGTTGCATTG CGCGCTGGTAATCTTCCTTTGGGTCTTAAAGTTTTGGGTTCGTATCTACGGGGTAGGGAC ATAGAGGACTGGATGGATATGATGCCGAGGCTTCAAAATGATTTAGATGGGAAAATTGAG AAGACACTAAGAGTCAGCTACGATGGATTAAACAACAAAAAGGATGAAGCAATATTTCGT CACATTGCATGTCTTTTCAATGGTGAGAAAGTAAATGACATCAAGTTGCTTCTAGCAGAG AGTGACTTGGATGTTAATATTGGGTTAAAAAACCTTGTTGATAAGTCTCTCATATTTGTA AGAGAGGATACTATTGAGATGCACCGTTTGCTACAAGATATGGGTAAGGAGATTGTCCGT GCACAGTCAAATGAGCCTGGAGAACGGGAATTCCTTGTGGATTCGAAGCATATCTACGAT GTACTTGAAGATAACACTGGTACTAAAAAAGTCTTAGGTATCGCACTGGATATTAACGAG ACTGATGGACTGTATATACATGAGAGTGCCTTCAAAGGGATGCGTAATCTCCTGTTTCTA AATTTTTACACTAAACAGAAGAAAGATGTAACATGGCACTTATCAGAAGGTTTCGATCAT TTACCCCCTAAGCTCAGATTACTGAGTTGGGAAAAATACCCGTTGAGATGTATGCCTTCT AACTTTCGTCCAGAAAACCTTGTTAAGCTTCAAATGTGTGAGAGCAAACTCGAAAAGTTG TGGGATGGAGTTCATTCACTTACAGGGCTCAGGAATATGGATTTGCGGGGATCAGAAAAC CTGAAAGAAATTCCAGATCTTTCTTTGGCCACTAACCTCAAGAAACTTGATGTTAGCAAT TGCACAAGTTTAGTGGAGCTTTCTTCCACAATTCAGAATCTTAATCAATTAGAGGAATTG CAGATGGAACGTTGCGAAAATTTGGAGAATCTTCCCATTGGAATCAACCTCGAATCTCTT TATTGCCTCAATCTCAATGGATGCTCAAAGTTGAGGAGTTTTCCAGATATCTCAACAACT ATCTCAGAGCTCTATCTAAGCGAAACAGCCATAGAAGAATTTCCCACTGAGTTGCATTTA GAGAATCTATATTATCTTGGCTTGTATGACATGAAGAGTGAGAAATTGTGGAAAAGAGTG CAGCCGCTTACACCGCTCATGACCATGCTGTCTCCCTCTTTGACGAAGCTATTTCTCTCA GATATCCCAAGTTTGGTGGAGCTTCCTTCTTCATTTCAGAATCTCCATAATCTTGAGCAT TTGAACATTGCACGATGCACAAATCTGGAGACTCTTCCCACTGGAGTCAACCTAGAATTA CTTGAACAACTTGATTTTTCTGGATGCTCACGGTTGAGGAGTTTTCCTGATATCTCAACC AACATCTTTTCACTAGTTCTAGACGGAACAGGGATTGAAGAGGTTCCTTGGTGGATTGAG GATTTCTATAGGCTCTCTTTCCTGAGTATGATTGGATGCAACAATTTACAAGGTGTGTCC CTAAACATTTCTAAACTGGAAAAACTCGAGACGGTAGACTTTTCAGACTGTGAGGCACTG TCTCATGCTAATTGGGATACCATTCCAAGTGCAGTGGCGATGGCAACAGAAAATATTCAC TCTAAGTTACCAGTCTGTATCAAATTCAGCAACTGCTTCAACTTGGATCATAAAGCTGTC CTTCTGCAACAATCAATTTTCAAGCAACTAATCTTGTCAGGTGGAGAAATGTTTTCATAT TTCACTCACCGAACTACTGGAACGTCTCTGACCAATATCCCTCTTCTTCACATCTCTCCT TGTCAACCATTCTTCAGATTTAGAGCTTGCGCCTTGGTTGATACTGAATCTATGGACATA GGTAGTGTATTTTTCCAGGTCCAGGTATCTTGTCGGTTCACAGACAGACTCGGGAACTAT TTGGATTCCCCTTATCAACACGAGGTCTTCGCAGTACTTGAGAAGGGTAGTCATATGGTT ATATCTGACTGCTGTTTCCCTTTTAACGAAGACAATGCTCCTCTAGCTGAACTTATCTAT GATCACGTGGATATACAGTTTCACTTTACTCAAGAAAACGATGAGCTCAAACTAATAGGA TGTGGTCTAAGACTCTCTGAAGCCGATAATGATCTAGGCAATGAGATTGATGGCAGTGAA GAGTGGGAAGACTGCAACGATAGCGGTCTTGGCAGTGAATCTGATAATTTAGAGGCAGAA GAAGACACGTGA

Peptide Sequence

PEP ID	AT5G46450.1
PEP Infomation	\| Disease resistance protein (TIR-NBS-LRR class) family \| Chr5:18835618-18839546 FORWARD LENGTH=1123 \| 201606
Sequence	MASSSSSSRNWSYDVFPSFSGEDVRKTFLSHFLRELERKSIITFKDNEMERSQSIAPELV EAIKDSRIAVIVFSKNYASSSWCLNELLEIMRCNKYLGQQVIPVFYYLDPSHLRKQSGEF GEAFKKTCQNQTEEVKNQWKQALTDVSNILGYHSKNCNSEATMIEEISSHILGKLSLTPS NDFEEFVGIKDHIEKVRLLLHLESDEVRMVGIWGTSGIGKTTIARALFSNLSSQFQSSVY IDRAFISKSMEGYGRANPDDYNMKLRLRENFLFEILGKKNMKIGAMEERLKHQKVLIIID DLDDQDVLDALVGRTQWFGSGSRIIVVTKNKHFLRAHGIDHVYEACLPSEELALEMFCRY AFRKNSPPDGFMELSSEVALRAGNLPLGLKVLGSYLRGRDIEDWMDMMPRLQNDLDGKIE KTLRVSYDGLNNKKDEAIFRHIACLFNGEKVNDIKLLLAESDLDVNIGLKNLVDKSLIFV REDTIEMHRLLQDMGKEIVRAQSNEPGEREFLVDSKHIYDVLEDNTGTKKVLGIALDINE TDGLYIHESAFKGMRNLLFLNFYTKQKKDVTWHLSEGFDHLPPKLRLLSWEKYPLRCMPS NFRPENLVKLQMCESKLEKLWDGVHSLTGLRNMDLRGSENLKEIPDLSLATNLKKLDVSN CTSLVELSSTIQNLNQLEELQMERCENLENLPIGINLESLYCLNLNGCSKLRSFPDISTT ISELYLSETAIEEFPTELHLENLYYLGLYDMKSEKLWKRVQPLTPLMTMLSPSLTKLFLS DIPSLVELPSSFQNLHNLEHLNIARCTNLETLPTGVNLELLEQLDFSGCSRLRSFPDIST NIFSLVLDGTGIEEVPWWIEDFYRLSFLSMIGCNNLQGVSLNISKLEKLETVDFSDCEAL SHANWDTIPSAVAMATENIHSKLPVCIKFSNCFNLDHKAVLLQQSIFKQLILSGGEMFSY FTHRTTGTSLTNIPLLHISPCQPFFRFRACALVDTESMDIGSVFFQVQVSCRFTDRLGNY LDSPYQHEVFAVLEKGSHMVISDCCFPFNEDNAPLAELIYDHVDIQFHFTQENDELKLIG CGLRLSEADNDLGNEIDGSEEWEDCNDSGLGSESDNLEAEEDT

Transcript Sequence

Transcript ID	AT5G46450.1
Transcript Infomation	\| Disease resistance protein (TIR-NBS-LRR class) family \| Chr5:18835605-18840058 FORWARD LENGTH=3897 \| 201606
Sequence	TCCTCCTCTGTTAATGGCTTCTTCGTCCTCCTCTTCTCGCAATTGGTCATATGATGTTTT CCCAAGCTTCAGTGGAGAAGATGTCCGCAAAACATTCCTCAGCCACTTTCTCAGGGAGCT GGAACGGAAATCGATCATTACTTTCAAAGACAATGAGATGGAGAGAAGCCAGTCAATAGC CCCAGAGCTTGTAGAGGCGATTAAAGATTCAAGGATTGCAGTGATTGTGTTCTCTAAAAA CTACGCCTCTTCAAGCTGGTGTCTAAATGAGCTGTTAGAGATTATGCGATGCAACAAATA TTTGGGCCAGCAAGTGATACCAGTCTTCTACTATTTGGATCCTTCTCATCTTCGGAAACA GTCGGGAGAGTTTGGAGAGGCATTTAAAAAGACTTGCCAGAACCAAACTGAGGAAGTGAA AAATCAGTGGAAGCAAGCGTTGACTGATGTTTCAAACATCCTCGGATATCATTCTAAGAA CTGCAATAGCGAAGCTACAATGATTGAAGAAATCTCCAGTCATATTTTAGGTAAACTGAG TTTAACTCCATCAAATGATTTTGAGGAATTTGTTGGCATCAAAGATCATATCGAGAAGGT GAGGTTGTTGTTGCATTTGGAATCTGACGAAGTGAGGATGGTTGGGATATGGGGTACCTC GGGAATCGGTAAGACTACCATTGCAAGAGCTTTATTTAGTAATCTCTCTAGTCAGTTTCA AAGTAGTGTTTACATAGACAGGGCTTTCATATCTAAGAGTATGGAAGGTTACGGTCGAGC CAATCCAGATGACTATAACATGAAGTTGCGTTTGCGAGAAAATTTCCTGTTTGAAATTTT GGGCAAAAAGAACATGAAGATCGGTGCAATGGAAGAAAGGCTGAAGCATCAAAAAGTTCT TATCATTATTGATGATTTGGATGATCAAGATGTGCTAGATGCCTTAGTGGGTAGAACTCA ATGGTTTGGAAGTGGGAGTAGAATAATTGTGGTTACAAAAAACAAACATTTCTTAAGGGC CCATGGGATTGATCATGTTTACGAGGCCTGTCTCCCATCTGAAGAACTTGCTCTTGAGAT GTTTTGTCGATATGCTTTCAGGAAGAATTCTCCACCTGATGGTTTTATGGAGCTTTCTTC TGAAGTTGCATTGCGCGCTGGTAATCTTCCTTTGGGTCTTAAAGTTTTGGGTTCGTATCT ACGGGGTAGGGACATAGAGGACTGGATGGATATGATGCCGAGGCTTCAAAATGATTTAGA TGGGAAAATTGAGAAGACACTAAGAGTCAGCTACGATGGATTAAACAACAAAAAGGATGA AGCAATATTTCGTCACATTGCATGTCTTTTCAATGGTGAGAAAGTAAATGACATCAAGTT GCTTCTAGCAGAGAGTGACTTGGATGTTAATATTGGGTTAAAAAACCTTGTTGATAAGTC TCTCATATTTGTAAGAGAGGATACTATTGAGATGCACCGTTTGCTACAAGATATGGGTAA GGAGATTGTCCGTGCACAGTCAAATGAGCCTGGAGAACGGGAATTCCTTGTGGATTCGAA GCATATCTACGATGTACTTGAAGATAACACTGGTACTAAAAAAGTCTTAGGTATCGCACT GGATATTAACGAGACTGATGGACTGTATATACATGAGAGTGCCTTCAAAGGGATGCGTAA TCTCCTGTTTCTAAATTTTTACACTAAACAGAAGAAAGATGTAACATGGCACTTATCAGA AGGTTTCGATCATTTACCCCCTAAGCTCAGATTACTGAGTTGGGAAAAATACCCGTTGAG ATGTATGCCTTCTAACTTTCGTCCAGAAAACCTTGTTAAGCTTCAAATGTGTGAGAGCAA ACTCGAAAAGTTGTGGGATGGAGTTCATTCACTTACAGGGCTCAGGAATATGGATTTGCG GGGATCAGAAAACCTGAAAGAAATTCCAGATCTTTCTTTGGCCACTAACCTCAAGAAACT TGATGTTAGCAATTGCACAAGTTTAGTGGAGCTTTCTTCCACAATTCAGAATCTTAATCA ATTAGAGGAATTGCAGATGGAACGTTGCGAAAATTTGGAGAATCTTCCCATTGGAATCAA CCTCGAATCTCTTTATTGCCTCAATCTCAATGGATGCTCAAAGTTGAGGAGTTTTCCAGA TATCTCAACAACTATCTCAGAGCTCTATCTAAGCGAAACAGCCATAGAAGAATTTCCCAC TGAGTTGCATTTAGAGAATCTATATTATCTTGGCTTGTATGACATGAAGAGTGAGAAATT GTGGAAAAGAGTGCAGCCGCTTACACCGCTCATGACCATGCTGTCTCCCTCTTTGACGAA GCTATTTCTCTCAGATATCCCAAGTTTGGTGGAGCTTCCTTCTTCATTTCAGAATCTCCA TAATCTTGAGCATTTGAACATTGCACGATGCACAAATCTGGAGACTCTTCCCACTGGAGT CAACCTAGAATTACTTGAACAACTTGATTTTTCTGGATGCTCACGGTTGAGGAGTTTTCC TGATATCTCAACCAACATCTTTTCACTAGTTCTAGACGGAACAGGGATTGAAGAGGTTCC TTGGTGGATTGAGGATTTCTATAGGCTCTCTTTCCTGAGTATGATTGGATGCAACAATTT ACAAGGTGTGTCCCTAAACATTTCTAAACTGGAAAAACTCGAGACGGTAGACTTTTCAGA CTGTGAGGCACTGTCTCATGCTAATTGGGATACCATTCCAAGTGCAGTGGCGATGGCAAC AGAAAATATTCACTCTAAGTTACCAGTCTGTATCAAATTCAGCAACTGCTTCAACTTGGA TCATAAAGCTGTCCTTCTGCAACAATCAATTTTCAAGCAACTAATCTTGTCAGGTGGAGA AATGTTTTCATATTTCACTCACCGAACTACTGGAACGTCTCTGACCAATATCCCTCTTCT TCACATCTCTCCTTGTCAACCATTCTTCAGATTTAGAGCTTGCGCCTTGGTTGATACTGA ATCTATGGACATAGGTAGTGTATTTTTCCAGGTCCAGGTATCTTGTCGGTTCACAGACAG ACTCGGGAACTATTTGGATTCCCCTTATCAACACGAGGTCTTCGCAGTACTTGAGAAGGG TAGTCATATGGTTATATCTGACTGCTGTTTCCCTTTTAACGAAGACAATGCTCCTCTAGC TGAACTTATCTATGATCACGTGGATATACAGTTTCACTTTACTCAAGAAAACGATGAGCT CAAACTAATAGGATGTGGTCTAAGACTCTCTGAAGCCGATAATGATCTAGGCAATGAGAT TGATGGCAGTGAAGAGTGGGAAGACTGCAACGATAGCGGTCTTGGCAGTGAATCTGATAA TTTAGAGGCAGAAGAAGACACGTGAGAAGGAAGCTTACTTGAAGAAGAAGATATTTTTTA TCTGTGCCAAACTTGTTTACAGCTTTTGGATCGGGCATGCTGATTGTTGTACATCTTCTC CTGCGTGGGATTTGAGGGTAGTGAGCTAGAGAAGATGATGCTCTAGAGCTCTACTTGTAT GAAGATTATATTGTACATTGAGATGAGAGAAGAGAGAAGAGATCACATCTTCAAACTTAT CAGAATCTGATCACAGTGAAGAAAGAGTGTGAAGACAATGATGTGGAGAAAAGGGAAGCA GTGAGAGAATGTAGATTATCTAATGACATGTGGCTTGTTAGAGAAAACTTTTATCTAATG ACATGCATCTTCAAACAAAGTTTTCTCTTTTTGTTTTTTGTTTTCTACAACTTCATCTGC AGATGCTTTGTTGAAGTAATTCTTGTACCATATATATAACGATTGGGAATTTTCTTGCTG ACTCTGCTGTAACTTAAACGCAAATGAGGAACATGAAATGTTGATAAGATTTTCTGT