Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT5G45540.1
CDS Infomation	\| transmembrane protein%2C putative (DUF594) \| Chr5:18458294-18460705 REVERSE LENGTH=2412 \| 201606
Sequence	ATGACTGACATGATTCCACCACATCTGAGGAAACTTTGGGACAAATGGAACATACGTGGA GTCATAATACTCAGTCTTTTCCTCCAAACAATCCTTATTTTCTTTGCACCTAGCCGAAGA CGCACCGCAAAGAAGCTCTTCCTTGTCCTCATATGGTCAGCTTATCTTCTTGCTGATTGG GCAGCTGATTACGCGGTTGGGCAAATCTCAGACAGTCAAGAAGAAGAAGCTGAATCAAAC AAACCATCCAAGAACCGTGAGCTGCTAGCATTTTGGTCACCGTTTCTTCTCTTGCACCTT GGAGGTCCAGATACCATTACAGCACTTGCCTTGGAGGATAATGAGCTTTGGGACAGACAC TTGTTTAGTCTTGTCTGTCAAGCGGTAGCCACTGTGTATGTGATCTTGTTGTCTATACCA AATAGGCTTCTGACTCCAACATTAATCATGTTTGTGGGAGGAGTGATCAAGTATGTCGAG AGAACAGCTGCGTTGTTCTCAGCGAGTCTTGACAAGTTCAAGGACTCTATGCTCGACGAT CCTGACCCTGGTGCTAATTACGCGAAACTCATGGAGGAATATGAAGCTAGGAAGAAGATG AATATGCCAACTGATGTAATAGTGGTGAAGGATCCAGAGAAAGGACGGGAAGGCAATACT CCAGTTAGGCCCGACAATGAATTGACCGCACTACAAGTTATTCAGTATGCTTACAAATAC TTTAACATCTTCAAAGGTCTTATTGTTGATCTAATCTTCACCAATCAAGAGCGCGACGAG AGCAGGAAATTCTTTGACAAGCTGACTGCAGAAGAAGCTTTACGTATCATCGAAGTCGAG CTCGGACTCATCTATGATTGTCTGTTCACCAAAGCAGAGATTCTGCATAACTGGACTGGA GCTGTGTTCCGGTTTATAGCTTTGGGGTGCCTTGTTGCATCTCTCTGCCTCTTCAAGATG AATAAGAAAGATCAATATGATGGATTCGATGTCGTCCTTACTTACGCATTGCTCATATGT GGAATAGCTCTTGATTCCATTGCTCTTCTCATGTTCTGTGTATCTGACTGGACCATCGCT AGACTGAGGAAACTAAAGGAGGACCTGGAAGAGAAAGACACCTTGACAGACAGAGTTCTC AACTGGATCCTCGATTTCAAGACGCTGAGGTGGAAAAGATCCAAATGTTCCCAGGATGGA CATCAAGTGCTCAACAGAAACTTTATGTTTCGCAGATGGTCTGAGTATGTTCATGCTTAC AACTTGATTGGCTTCTGTTTGGGAATACGTCCCAAGAGAATCCATTATACCAAGGGTAAG ATACACAGTTTCTTTCACCAGACCGTTCACATTTTGTCCATAGATACTGCCATCGAAAAT GCCACCAGAGGAACTCGCCAGTTTCATAACTGGATTGGTCGCTTTCTCAGCAATTTGTCC AAAAGAGACAATTCGGTAATCCGTACAGGTCTTAGATGGTTTCTCTTTTTCCCTCAACTC CTCGGACTTTTGATCTACAACTTCCTCGACTTTTTCGGTATCAAAGATTTGGTTGAAGAG ATAAGATTCACGGTCAGTGATCGCCTCACCAGAGAACTATGGGAGTTCATATTCACAGAG GTGCAACAAAAACACCGATTTGCTGAAGACCAAGAAAGTGCAAAGGGTATATCTTCAGCT AGAGGAAACTGGACTCTACTTGAAACATCAAGCAAAAAGAAAGAAGACGGAACAGACCAT ACGAAACTTCTGCAGTACGTGACGGAGAAGGATTACGATCAGAGCATTCTACTGTGGCAC ATCGCCACAGAACTCTTATACCAAAAGCCAATAGACAAAAAAGTCACAGAGAAAGAAGAA CACAGTACTAACCGAGAGAAAGAAGAACACAGTAACCGAGAGTTCAGCAAAATCCTTTCG GACTACATGATGTACCTCCTTATAGTGCAGCCAACTCTGATGTCAGCTGTTTCCGGAATC GCAAAGATACGTTTCAGAGACACATGCGAAGAGGCAAAGGACTTTTTCCAGAGGAGACAT GTCGACAAATCAAGATATGTAAAAAAAAACCTCATGAAAGAAGCATGTCGAGCTATTCTC TCTGTCAACACAGAAATCGATCCAATGGCTGTGAAAGGAGACAGAAGCAAATCCGTGCTT TTCGATGCAAGCGTGCTCGCAAAAGAGCTAATGAATGAAGGTGAAAACATGTGGGAAGTA GTGAGCAAAGTGTGGGTTGAGTTGCTTTGCTATGCATCACTTCATTGTGACTCTCAAGAA CATGCTTCTCAACTTAGCAAAGGCGGTGAACTTATCAACTTTGTTTGGCTATTAATGGCT CATTTTGGACTCGGAGATCAATTCCAAATCAACAGAGATGATGCAAGAGCCAAACTTATA GTCGCCAACTGA

Peptide Sequence

PEP ID	AT5G45540.1
PEP Infomation	\| transmembrane protein%2C putative (DUF594) \| Chr5:18458294-18460705 REVERSE LENGTH=803 \| 201606
Sequence	MTDMIPPHLRKLWDKWNIRGVIILSLFLQTILIFFAPSRRRTAKKLFLVLIWSAYLLADW AADYAVGQISDSQEEEAESNKPSKNRELLAFWSPFLLLHLGGPDTITALALEDNELWDRH LFSLVCQAVATVYVILLSIPNRLLTPTLIMFVGGVIKYVERTAALFSASLDKFKDSMLDD PDPGANYAKLMEEYEARKKMNMPTDVIVVKDPEKGREGNTPVRPDNELTALQVIQYAYKY FNIFKGLIVDLIFTNQERDESRKFFDKLTAEEALRIIEVELGLIYDCLFTKAEILHNWTG AVFRFIALGCLVASLCLFKMNKKDQYDGFDVVLTYALLICGIALDSIALLMFCVSDWTIA RLRKLKEDLEEKDTLTDRVLNWILDFKTLRWKRSKCSQDGHQVLNRNFMFRRWSEYVHAY NLIGFCLGIRPKRIHYTKGKIHSFFHQTVHILSIDTAIENATRGTRQFHNWIGRFLSNLS KRDNSVIRTGLRWFLFFPQLLGLLIYNFLDFFGIKDLVEEIRFTVSDRLTRELWEFIFTE VQQKHRFAEDQESAKGISSARGNWTLLETSSKKKEDGTDHTKLLQYVTEKDYDQSILLWH IATELLYQKPIDKKVTEKEEHSTNREKEEHSNREFSKILSDYMMYLLIVQPTLMSAVSGI AKIRFRDTCEEAKDFFQRRHVDKSRYVKKNLMKEACRAILSVNTEIDPMAVKGDRSKSVL FDASVLAKELMNEGENMWEVVSKVWVELLCYASLHCDSQEHASQLSKGGELINFVWLLMA HFGLGDQFQINRDDARAKLIVAN

Transcript Sequence

Transcript ID	AT5G45540.1
Transcript Infomation	\| transmembrane protein%2C putative (DUF594) \| Chr5:18457870-18460914 REVERSE LENGTH=3045 \| 201606
Sequence	ATAAGCAAGGTATAAAGTTACTTATAGTGTAACAATAACACTTGATGGTTTGTGTTTCTA TTTCAAGTCTCAAAACAATGGAAGCAAAGAAACCCATAGACAAAAACTTAAACTTTATGT GAAAGAAACGTTCACTAACCTTTGACACTACTGTGAACATCCACAGTAAACCAAGTGCAG TTTTGCGGTCCAACGAAGAAGAAGACAAGATGACTGACATGATTCCACCACATCTGAGGA AACTTTGGGACAAATGGAACATACGTGGAGTCATAATACTCAGTCTTTTCCTCCAAACAA TCCTTATTTTCTTTGCACCTAGCCGAAGACGCACCGCAAAGAAGCTCTTCCTTGTCCTCA TATGGTCAGCTTATCTTCTTGCTGATTGGGCAGCTGATTACGCGGTTGGGCAAATCTCAG ACAGTCAAGAAGAAGAAGCTGAATCAAACAAACCATCCAAGAACCGTGAGCTGCTAGCAT TTTGGTCACCGTTTCTTCTCTTGCACCTTGGAGGTCCAGATACCATTACAGCACTTGCCT TGGAGGATAATGAGCTTTGGGACAGACACTTGTTTAGTCTTGTCTGTCAAGCGGTAGCCA CTGTGTATGTGATCTTGTTGTCTATACCAAATAGGCTTCTGACTCCAACATTAATCATGT TTGTGGGAGGAGTGATCAAGTATGTCGAGAGAACAGCTGCGTTGTTCTCAGCGAGTCTTG ACAAGTTCAAGGACTCTATGCTCGACGATCCTGACCCTGGTGCTAATTACGCGAAACTCA TGGAGGAATATGAAGCTAGGAAGAAGATGAATATGCCAACTGATGTAATAGTGGTGAAGG ATCCAGAGAAAGGACGGGAAGGCAATACTCCAGTTAGGCCCGACAATGAATTGACCGCAC TACAAGTTATTCAGTATGCTTACAAATACTTTAACATCTTCAAAGGTCTTATTGTTGATC TAATCTTCACCAATCAAGAGCGCGACGAGAGCAGGAAATTCTTTGACAAGCTGACTGCAG AAGAAGCTTTACGTATCATCGAAGTCGAGCTCGGACTCATCTATGATTGTCTGTTCACCA AAGCAGAGATTCTGCATAACTGGACTGGAGCTGTGTTCCGGTTTATAGCTTTGGGGTGCC TTGTTGCATCTCTCTGCCTCTTCAAGATGAATAAGAAAGATCAATATGATGGATTCGATG TCGTCCTTACTTACGCATTGCTCATATGTGGAATAGCTCTTGATTCCATTGCTCTTCTCA TGTTCTGTGTATCTGACTGGACCATCGCTAGACTGAGGAAACTAAAGGAGGACCTGGAAG AGAAAGACACCTTGACAGACAGAGTTCTCAACTGGATCCTCGATTTCAAGACGCTGAGGT GGAAAAGATCCAAATGTTCCCAGGATGGACATCAAGTGCTCAACAGAAACTTTATGTTTC GCAGATGGTCTGAGTATGTTCATGCTTACAACTTGATTGGCTTCTGTTTGGGAATACGTC CCAAGAGAATCCATTATACCAAGGGTAAGATACACAGTTTCTTTCACCAGACCGTTCACA TTTTGTCCATAGATACTGCCATCGAAAATGCCACCAGAGGAACTCGCCAGTTTCATAACT GGATTGGTCGCTTTCTCAGCAATTTGTCCAAAAGAGACAATTCGGTAATCCGTACAGGTC TTAGATGGTTTCTCTTTTTCCCTCAACTCCTCGGACTTTTGATCTACAACTTCCTCGACT TTTTCGGTATCAAAGATTTGGTTGAAGAGATAAGATTCACGGTCAGTGATCGCCTCACCA GAGAACTATGGGAGTTCATATTCACAGAGGTGCAACAAAAACACCGATTTGCTGAAGACC AAGAAAGTGCAAAGGGTATATCTTCAGCTAGAGGAAACTGGACTCTACTTGAAACATCAA GCAAAAAGAAAGAAGACGGAACAGACCATACGAAACTTCTGCAGTACGTGACGGAGAAGG ATTACGATCAGAGCATTCTACTGTGGCACATCGCCACAGAACTCTTATACCAAAAGCCAA TAGACAAAAAAGTCACAGAGAAAGAAGAACACAGTACTAACCGAGAGAAAGAAGAACACA GTAACCGAGAGTTCAGCAAAATCCTTTCGGACTACATGATGTACCTCCTTATAGTGCAGC CAACTCTGATGTCAGCTGTTTCCGGAATCGCAAAGATACGTTTCAGAGACACATGCGAAG AGGCAAAGGACTTTTTCCAGAGGAGACATGTCGACAAATCAAGATATGTAAAAAAAAACC TCATGAAAGAAGCATGTCGAGCTATTCTCTCTGTCAACACAGAAATCGATCCAATGGCTG TGAAAGGAGACAGAAGCAAATCCGTGCTTTTCGATGCAAGCGTGCTCGCAAAAGAGCTAA TGAATGAAGGTGAAAACATGTGGGAAGTAGTGAGCAAAGTGTGGGTTGAGTTGCTTTGCT ATGCATCACTTCATTGTGACTCTCAAGAACATGCTTCTCAACTTAGCAAAGGCGGTGAAC TTATCAACTTTGTTTGGCTATTAATGGCTCATTTTGGACTCGGAGATCAATTCCAAATCA ACAGAGATGATGCAAGAGCCAAACTTATAGTCGCCAACTGATTTATCAACACAAACCTGC ACTTATGTTTTACTTCCTTGAATAAATCTGCACTAATAGTGTAGTAACTTTAGTCATCAT CTATGCTTATGAACATGAAAATCATATCCTTTGTTATCAATTTCATTCAGGACTTCGAAT CTTTCTCAGTAATCACACAATTCATCAGATTTTTCACAACATAGAACAGGATTCATCGAT TCACACAATTCTTCAATAAATAAATAAAAACCTAAATCCCCAAATTTTGATTGACTTCTT CACTACTAAACCCTACTTACTTACAATACAAAAACAGCCTCAGGGAACTAGAACGTAGTT GAAATTTCGTGATTATTGATTACCCTTTGCACTTTCATTATGCTCTCTTCCATGTTCGTC CTCTACATTGCGATTTTGGCGCGTGATTCTGAGTCTGTTTTTCTT